Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Zebrafish_28hpf_whole3_PA, section s69.

Sample reads: 133,401. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. AC024175.4 AC024175.4 4935.29 36995.99
2. rpl8 ENSDARG00000014867 2093.76 15695.27 ribosomal protein L8 [Source:ZFIN;Acc:ZDB-GENE-040426-1670]
3. zgc:112425 zgc:112425 1794.65 13453.08
4. krt4 ENSDARG00000017624, ENSDARG00000115790 1495.54 11210.89 keratin 4 [Source:ZFIN;Acc:ZDB-GENE-000607-83]
5. hmgn2 ENSDARG00000099572 1345.99 10089.83 high mobility group nucleosomal binding domain 2 [Source:ZFIN;Acc:ZDB-GENE-051030-81]
6. si:dkey-151g10.6 si:dkey-151g10.6 1345.99 10089.83
7. hmga1a ENSDARG00000028335 1196.43 8968.70 high mobility group AT-hook 1a [Source:ZFIN;Acc:ZDB-GENE-010502-1]
8. mt-nd4 ENSDARG00000063917 1046.88 7847.64 NADH dehydrogenase 4, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-10]
9. tmsb4x ENSDARG00000077777 1046.88 7847.64 thymosin beta 4 X-linked [Source:ZFIN;Acc:ZDB-GENE-030131-8304]
10. mt-co2 ENSDARG00000063908 897.33 6726.58 cytochrome c oxidase II, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-15]
11. mt-co3 ENSDARG00000063912 897.33 6726.58 cytochrome c oxidase III, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-16]
12. mt-nd2 ENSDARG00000063899 897.33 6726.58 NADH dehydrogenase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-8]
13. ppiaa ENSDARG00000009212 897.33 6726.58 peptidylprolyl isomerase Aa (cyclophilin A) [Source:ZFIN;Acc:ZDB-GENE-030131-8556]
14. ptmab ENSDARG00000101766 897.33 6726.58 prothymosin alpha b [Source:ZFIN;Acc:ZDB-GENE-030131-8681]
15. zgc:161979_1 zgc:161979_1 897.33 6726.58
16. eef1a1l1 ENSDARG00000020850 747.77 5605.44 eukaryotic translation elongation factor 1 alpha 1, like 1 [Source:ZFIN;Acc:ZDB-GENE-990415-52]
17. gnb2l1 747.77 5605.44 guanine nucleotide binding protein (G protein), beta polypeptide 2-like 1
18. id1 ENSDARG00000040764 747.77 5605.44 inhibitor of DNA binding 1 [Source:ZFIN;Acc:ZDB-GENE-990415-96]
19. rpl10a ENSDARG00000042905, ENSDARG00000115649 747.77 5605.44 ribosomal protein L10a [Source:ZFIN;Acc:ZDB-GENE-030131-2025]
20. rpl18a ENSDARG00000025073 747.77 5605.44 ribosomal protein L18a [Source:ZFIN;Acc:ZDB-GENE-040426-1071]
21. zgc:123194 zgc:123194 747.77 5605.44
22. eif5a ENSDARG00000017235 598.22 4484.39 eukaryotic translation initiation factor 5A [Source:ZFIN;Acc:ZDB-GENE-040426-2229]
23. fabp3 ENSDARG00000023290 598.22 4484.39 fatty acid binding protein 3, muscle and heart [Source:ZFIN;Acc:ZDB-GENE-020318-2]
24. hsp90ab1 ENSDARG00000029150 598.22 4484.39 heat shock protein 90, alpha (cytosolic), class B member 1 [Source:ZFIN;Acc:ZDB-GENE-990415-95]
25. hspa8 ENSDARG00000068992, ENSDARG00000114726 598.22 4484.39 heat shock protein 8 [Source:ZFIN;Acc:ZDB-GENE-990415-92]
26. nrarpb ENSDARG00000018958 598.22 4484.39 NOTCH regulated ankyrin repeat protein b [Source:ZFIN;Acc:ZDB-GENE-030515-7]
27. rpl19 ENSDARG00000013307 598.22 4484.39 ribosomal protein L19 [Source:ZFIN;Acc:ZDB-GENE-040426-2290]
28. rpl35 ENSDARG00000018334 598.22 4484.39 ribosomal protein L35 [Source:ZFIN;Acc:ZDB-GENE-020419-2]
29. rps19 ENSDARG00000030602 598.22 4484.39 ribosomal protein S19 [Source:ZFIN;Acc:ZDB-GENE-040426-1716]
30. spag7 ENSDARG00000011555 598.22 4484.39 sperm associated antigen 7 [Source:ZFIN;Acc:ZDB-GENE-040426-1632]
31. G3BP2 ENSDARG00000014790 448.66 3363.25 GTPase activating protein (SH3 domain) binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-070112-1972]
32. btf3 ENSDARG00000035400, ENSDARG00000116462 448.66 3363.25 basic transcription factor 3 [Source:ZFIN;Acc:ZDB-GENE-030131-8731]
33. calm3a_1 ENSDARG00000015050, ENSDARG00000100825 448.66 3363.25 calmodulin 3a (phosphorylase kinase, delta) [Source:ZFIN;Acc:ZDB-GENE-030131-5590]
34. eef2b ENSDARG00000100371, ENSDARG00000109247 448.66 3363.25 eukaryotic translation elongation factor 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5128]
35. ercc6 ENSDARG00000075612 448.66 3363.25 excision repair cross-complementation group 6 [Source:ZFIN;Acc:ZDB-GENE-070228-1]
36. fth1a ENSDARG00000015551 448.66 3363.25 ferritin, heavy polypeptide 1a [Source:ZFIN;Acc:ZDB-GENE-000831-2]
37. h3f3b.1 ENSDARG00000020504, ENSDARG00000068434, ENSDARG00000068436 448.66 3363.25 H3 histone, family 3B.1 [Source:ZFIN;Acc:ZDB-GENE-050417-65]
38. hnrnpa0b ENSDARG00000036162, ENSDARG00000112653 448.66 3363.25 heterogeneous nuclear ribonucleoprotein A0b [Source:ZFIN;Acc:ZDB-GENE-030131-6154]
39. hspa4b ENSDARG00000018989, ENSDARG00000112727, ENSDARG00000116230 448.66 3363.25 heat shock protein 4b [Source:ZFIN;Acc:ZDB-GENE-030131-6018]
40. marcksb ENSDARG00000008803 448.66 3363.25 myristoylated alanine-rich protein kinase C substrate b [Source:ZFIN;Acc:ZDB-GENE-030131-1921]
41. mpc2 ENSDARG00000024478 448.66 3363.25 mitochondrial pyruvate carrier 2 [Source:ZFIN;Acc:ZDB-GENE-030131-330]
42. mt-cyb ENSDARG00000063924 448.66 3363.25 cytochrome b, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-17]
43. pabpc1a ENSDARG00000017219 448.66 3363.25 poly(A) binding protein, cytoplasmic 1a [Source:ZFIN;Acc:ZDB-GENE-030131-3238]
44. pbx4 ENSDARG00000052150 448.66 3363.25 pre-B-cell leukemia transcription factor 4 [Source:ZFIN;Acc:ZDB-GENE-000201-18]
45. ran ENSDARG00000057026 448.66 3363.25 RAN, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-990415-88]
46. rpl26 ENSDARG00000102317 448.66 3363.25 ribosomal protein L26 [Source:ZFIN;Acc:ZDB-GENE-040426-2117]
47. rplp0 ENSDARG00000051783 448.66 3363.25 ribosomal protein, large, P0 [Source:ZFIN;Acc:ZDB-GENE-000629-1]
48. si:ch1073-429i10.3 448.66 3363.25 si:ch1073-429i10.3, transcript variant X2
49. spcs2 ENSDARG00000042823 448.66 3363.25 signal peptidase complex subunit 2 [Source:ZFIN;Acc:ZDB-GENE-050320-32]
50. srsf3b ENSDARG00000059360 448.66 3363.25 serine/arginine-rich splicing factor 3b [Source:ZFIN;Acc:ZDB-GENE-071005-2]
51. znf865 ENSDARG00000036698 448.66 3363.25 zinc finger protein 865 [Source:ZFIN;Acc:ZDB-GENE-060503-896]
52. AL954137.2 ENSDARG00000114408 299.11 2242.19
53. C1H7orf55 C1H7orf55 299.11 2242.19
54. CABZ01081490.1 ENSDARG00000111653 299.11 2242.19
55. RPL29 ENSDARG00000077717 299.11 2242.19 ribosomal protein L29 [Source:ZFIN;Acc:ZDB-GENE-040801-167]
56. abce1 ENSDARG00000007216 299.11 2242.19 ATP-binding cassette, sub-family E (OABP), member 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1995]
57. actb1 ENSDARG00000037746, ENSDARG00000113649 299.11 2242.19 actin, beta 1 [Source:ZFIN;Acc:ZDB-GENE-000329-1]
58. actb2 ENSDARG00000037870 299.11 2242.19 actin, beta 2 [Source:ZFIN;Acc:ZDB-GENE-000329-3]
59. aldoaa ENSDARG00000011665 299.11 2242.19 aldolase a, fructose-bisphosphate, a [Source:ZFIN;Acc:ZDB-GENE-030131-8369]
60. apoa1a ENSDARG00000012076, ENSDARG00000110395 299.11 2242.19 apolipoprotein A-Ia [Source:ZFIN;Acc:ZDB-GENE-990415-14]
61. apoa4 apoa4 299.11 2242.19
62. atf4b1 atf4b1 299.11 2242.19
63. atp5c1 299.11 2242.19 ATP synthase, H+ transporting, mitochondrial F1 complex, gamma polypeptide 1, transcript variant 3
64. atp5g1 299.11 2242.19 ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C1 (subunit 9)
65. atp6v0cb ENSDARG00000036577 299.11 2242.19 ATPase H+ transporting V0 subunit cb [Source:ZFIN;Acc:ZDB-GENE-030131-4127]
66. bmi1a ENSDARG00000006010 299.11 2242.19 bmi1 polycomb ring finger oncogene 1a [Source:ZFIN;Acc:ZDB-GENE-030131-224]
67. bzw1a ENSDARG00000010481 299.11 2242.19 basic leucine zipper and W2 domains 1a [Source:ZFIN;Acc:ZDB-GENE-030131-3951]
68. cct4 ENSDARG00000013475 299.11 2242.19 chaperonin containing TCP1, subunit 4 (delta) [Source:ZFIN;Acc:ZDB-GENE-040426-1421]
69. cd99 ENSDARG00000051975 299.11 2242.19 CD99 molecule [Source:ZFIN;Acc:ZDB-GENE-061103-391]
70. cd9b ENSDARG00000016691 299.11 2242.19 CD9 molecule b [Source:ZFIN;Acc:ZDB-GENE-040426-2768]
71. cenpe ENSDARG00000063385 299.11 2242.19 centromere protein E [Source:ZFIN;Acc:ZDB-GENE-060929-860]
72. cx43.4 ENSDARG00000007099 299.11 2242.19 connexin 43.4 [Source:ZFIN;Acc:ZDB-GENE-990415-38]
73. dbr1 ENSDARG00000056923, ENSDARG00000116603 299.11 2242.19 debranching RNA lariats 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2466]
74. ddx5 ENSDARG00000038068 299.11 2242.19 DEAD (Asp-Glu-Ala-Asp) box helicase 5 [Source:ZFIN;Acc:ZDB-GENE-030131-925]
75. eif3s10 ENSDARG00000076815 299.11 2242.19 eukaryotic translation initiation factor 3, subunit 10 (theta) [Source:ZFIN;Acc:ZDB-GENE-030131-5726]
76. eif5a2 ENSDARG00000056186 299.11 2242.19 eukaryotic translation initiation factor 5A2 [Source:ZFIN;Acc:ZDB-GENE-040426-2405]
77. eng1b eng1b 299.11 2242.19
78. fam193b ENSDARG00000102831 299.11 2242.19 family with sequence similarity 193, member B [Source:ZFIN;Acc:ZDB-GENE-111102-1]
79. gch2 ENSDARG00000099101 299.11 2242.19 GTP cyclohydrolase 2 [Source:ZFIN;Acc:ZDB-GENE-001205-3]
80. h2afva ENSDARG00000068820 299.11 2242.19 H2A histone family, member Va [Source:ZFIN;Acc:ZDB-GENE-020717-1]
81. hdlbp hdlbp 299.11 2242.19
82. hmgb1a ENSDARG00000099175, ENSDARG00000114353 299.11 2242.19 high mobility group box 1a [Source:ZFIN;Acc:ZDB-GENE-030131-341]
83. hmgb2b ENSDARG00000053990 299.11 2242.19 high mobility group box 2b [Source:ZFIN;Acc:ZDB-GENE-040912-122]
84. hspe1 ENSDARG00000056167 299.11 2242.19 heat shock 10 protein 1 [Source:ZFIN;Acc:ZDB-GENE-000906-2]
85. ier5 ENSDARG00000009881, ENSDARG00000111680 299.11 2242.19 immediate early response 5 [Source:ZFIN;Acc:ZDB-GENE-030616-127]
86. kif22 ENSDARG00000102624 299.11 2242.19 kinesin family member 22 [Source:ZFIN;Acc:ZDB-GENE-080204-34]
87. kmt2cb ENSDARG00000075560 299.11 2242.19 lysine (K)-specific methyltransferase 2Cb [Source:ZFIN;Acc:ZDB-GENE-070705-340]
88. lgi1a ENSDARG00000020493 299.11 2242.19 leucine-rich, glioma inactivated 1a [Source:ZFIN;Acc:ZDB-GENE-030131-1731]
89. lum ENSDARG00000045580 299.11 2242.19 lumican [Source:ZFIN;Acc:ZDB-GENE-040625-24]
90. marcksl1b ENSDARG00000035715 299.11 2242.19 MARCKS-like 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2315]
91. med13b ENSDARG00000003910 299.11 2242.19 mediator complex subunit 13b [Source:ZFIN;Acc:ZDB-GENE-030131-3529]
92. mlf2 ENSDARG00000034616, ENSDARG00000110660 299.11 2242.19 myeloid leukemia factor 2 [Source:ZFIN;Acc:ZDB-GENE-050913-67]
93. mt-atp6 ENSDARG00000063911 299.11 2242.19 ATP synthase 6, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-18]
94. mylpfa ENSDARG00000053254, ENSDARG00000112448, ENSDARG00000113256 299.11 2242.19 myosin light chain, phosphorylatable, fast skeletal muscle a [Source:ZFIN;Acc:ZDB-GENE-990712-15]
95. naa15a ENSDARG00000003213 299.11 2242.19 N(alpha)-acetyltransferase 15, NatA auxiliary subunit a [Source:ZFIN;Acc:ZDB-GENE-030131-2392]
96. ndufs1 ENSDARG00000028546 299.11 2242.19 NADH:ubiquinone oxidoreductase core subunit S1 [Source:ZFIN;Acc:ZDB-GENE-030131-478]
97. pias4a ENSDARG00000007081 299.11 2242.19 protein inhibitor of activated STAT, 4a [Source:ZFIN;Acc:ZDB-GENE-040426-2734]
98. psmb6 ENSDARG00000002240 299.11 2242.19 proteasome subunit beta 6 [Source:ZFIN;Acc:ZDB-GENE-990415-216]
99. psmc5 ENSDARG00000015315 299.11 2242.19 proteasome 26S subunit, ATPase 5 [Source:ZFIN;Acc:ZDB-GENE-030131-6547]
100. rab10 ENSDARG00000046106 299.11 2242.19 RAB10, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-040718-304]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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