Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Zebrafish_28hpf_whole3_PA, section s67.

Sample reads: 133,404. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. AC024175.4 AC024175.4 12195.37 91417.00
2. actb2 ENSDARG00000037870 2488.85 18656.52 actin, beta 2 [Source:ZFIN;Acc:ZDB-GENE-000329-3]
3. zgc:112425 zgc:112425 2488.85 18656.52
4. tmsb4x ENSDARG00000077777 1742.20 13059.60 thymosin beta 4 X-linked [Source:ZFIN;Acc:ZDB-GENE-030131-8304]
5. krt4 ENSDARG00000017624, ENSDARG00000115790 1244.43 9328.30 keratin 4 [Source:ZFIN;Acc:ZDB-GENE-000607-83]
6. pcna ENSDARG00000054155 1244.43 9328.30 proliferating cell nuclear antigen [Source:ZFIN;Acc:ZDB-GENE-000210-8]
7. ppiaa ENSDARG00000009212 1244.43 9328.30 peptidylprolyl isomerase Aa (cyclophilin A) [Source:ZFIN;Acc:ZDB-GENE-030131-8556]
8. eef2b ENSDARG00000100371, ENSDARG00000109247 995.54 7462.61 eukaryotic translation elongation factor 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5128]
9. hmgn2 ENSDARG00000099572 995.54 7462.61 high mobility group nucleosomal binding domain 2 [Source:ZFIN;Acc:ZDB-GENE-051030-81]
10. mt-co2 ENSDARG00000063908 995.54 7462.61 cytochrome c oxidase II, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-15]
11. mt-nd2 ENSDARG00000063899 995.54 7462.61 NADH dehydrogenase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-8]
12. rpl21 ENSDARG00000010516, ENSDARG00000110263 995.54 7462.61 ribosomal protein L21 [Source:ZFIN;Acc:ZDB-GENE-030131-8512]
13. rpl9 ENSDARG00000037350, ENSDARG00000112384 995.54 7462.61 ribosomal protein L9 [Source:ZFIN;Acc:ZDB-GENE-030131-8646]
14. rps26l ENSDARG00000030408 995.54 7462.61 ribosomal protein S26, like [Source:ZFIN;Acc:ZDB-GENE-040426-1706]
15. si:dkey-151g10.6 si:dkey-151g10.6 995.54 7462.61
16. aldoaa ENSDARG00000011665 746.66 5596.99 aldolase a, fructose-bisphosphate, a [Source:ZFIN;Acc:ZDB-GENE-030131-8369]
17. eif5a ENSDARG00000017235 746.66 5596.99 eukaryotic translation initiation factor 5A [Source:ZFIN;Acc:ZDB-GENE-040426-2229]
18. fth1a ENSDARG00000015551 746.66 5596.99 ferritin, heavy polypeptide 1a [Source:ZFIN;Acc:ZDB-GENE-000831-2]
19. hsp90ab1 ENSDARG00000029150 746.66 5596.99 heat shock protein 90, alpha (cytosolic), class B member 1 [Source:ZFIN;Acc:ZDB-GENE-990415-95]
20. hspa8 ENSDARG00000068992, ENSDARG00000114726 746.66 5596.99 heat shock protein 8 [Source:ZFIN;Acc:ZDB-GENE-990415-92]
21. mt-co3 ENSDARG00000063912 746.66 5596.99 cytochrome c oxidase III, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-16]
22. ptmab ENSDARG00000101766 746.66 5596.99 prothymosin alpha b [Source:ZFIN;Acc:ZDB-GENE-030131-8681]
23. rpl10a ENSDARG00000042905, ENSDARG00000115649 746.66 5596.99 ribosomal protein L10a [Source:ZFIN;Acc:ZDB-GENE-030131-2025]
24. rps10 ENSDARG00000034897 746.66 5596.99 ribosomal protein S10 [Source:ZFIN;Acc:ZDB-GENE-040426-1481]
25. AL954137.2 ENSDARG00000114408 497.77 3731.30
26. ATP5B 497.77 3731.30 ATP synthase, H+ transporting, mitochondrial F1 complex, beta polypeptide
27. DNAJA4 ENSDARG00000051762 497.77 3731.30 DnaJ heat shock protein family (Hsp40) member A4 [Source:HGNC Symbol;Acc:HGNC:14885]
28. HNRNPAB HNRNPAB 497.77 3731.30
29. RPL37A RPL37A 497.77 3731.30
30. apoa1a ENSDARG00000012076, ENSDARG00000110395 497.77 3731.30 apolipoprotein A-Ia [Source:ZFIN;Acc:ZDB-GENE-990415-14]
31. appb ENSDARG00000055543, ENSDARG00000109552 497.77 3731.30 amyloid beta (A4) precursor protein b [Source:ZFIN;Acc:ZDB-GENE-020220-1]
32. cfl1 ENSDARG00000021124 497.77 3731.30 cofilin 1 [Source:ZFIN;Acc:ZDB-GENE-030131-215]
33. commd3 ENSDARG00000045402 497.77 3731.30 COMM domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-041219-3]
34. ddx5 ENSDARG00000038068 497.77 3731.30 DEAD (Asp-Glu-Ala-Asp) box helicase 5 [Source:ZFIN;Acc:ZDB-GENE-030131-925]
35. dnajc9 ENSDARG00000031293, ENSDARG00000111989 497.77 3731.30 DnaJ (Hsp40) homolog, subfamily C, member 9 [Source:ZFIN;Acc:ZDB-GENE-040718-130]
36. eef1a1l1 ENSDARG00000020850 497.77 3731.30 eukaryotic translation elongation factor 1 alpha 1, like 1 [Source:ZFIN;Acc:ZDB-GENE-990415-52]
37. eif1axb ENSDARG00000057912, ENSDARG00000111310 497.77 3731.30 eukaryotic translation initiation factor 1A X-linked b [Source:ZFIN;Acc:ZDB-GENE-030131-1319]
38. foxn4 ENSDARG00000010591 497.77 3731.30 forkhead box N4 [Source:ZFIN;Acc:ZDB-GENE-990415-277]
39. gapdhs ENSDARG00000039914 497.77 3731.30 glyceraldehyde-3-phosphate dehydrogenase, spermatogenic [Source:ZFIN;Acc:ZDB-GENE-020913-1]
40. gnb4b ENSDARG00000115383 497.77 3731.30 guanine nucleotide binding protein (G protein), beta polypeptide 4b [Source:ZFIN;Acc:ZDB-GENE-041114-167]
41. h3f3a 497.77 3731.30 H3 histone, family 3A, transcript variant X1
42. hnrnph1l ENSDARG00000005551 497.77 3731.30 heterogeneous nuclear ribonucleoprotein H1, like [Source:ZFIN;Acc:ZDB-GENE-030131-275]
43. ilf2 ENSDARG00000014591 497.77 3731.30 interleukin enhancer binding factor 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2345]
44. marcksb ENSDARG00000008803 497.77 3731.30 myristoylated alanine-rich protein kinase C substrate b [Source:ZFIN;Acc:ZDB-GENE-030131-1921]
45. mt-atp6 ENSDARG00000063911 497.77 3731.30 ATP synthase 6, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-18]
46. mt-cyb ENSDARG00000063924 497.77 3731.30 cytochrome b, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-17]
47. mt-nd1 ENSDARG00000063895 497.77 3731.30 NADH dehydrogenase 1, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-7]
48. ncl ENSDARG00000002710 497.77 3731.30 nucleolin [Source:ZFIN;Acc:ZDB-GENE-030131-6986]
49. npm1a ENSDARG00000014329, ENSDARG00000113199 497.77 3731.30 nucleophosmin 1a [Source:ZFIN;Acc:ZDB-GENE-021028-1]
50. nrf1 ENSDARG00000000018 497.77 3731.30 nuclear respiratory factor 1 [Source:ZFIN;Acc:ZDB-GENE-001221-1]
51. pabpc1a ENSDARG00000017219 497.77 3731.30 poly(A) binding protein, cytoplasmic 1a [Source:ZFIN;Acc:ZDB-GENE-030131-3238]
52. ppiab ENSDARG00000103994 497.77 3731.30 peptidylprolyl isomerase Ab (cyclophilin A) [Source:ZFIN;Acc:ZDB-GENE-030131-7459]
53. ppp1r3ca ENSDARG00000071005, ENSDARG00000111817, ENSDARG00000112962 497.77 3731.30 protein phosphatase 1, regulatory subunit 3Ca [Source:ZFIN;Acc:ZDB-GENE-040718-70]
54. rpl14 ENSDARG00000103433 497.77 3731.30 ribosomal protein L14 [Source:ZFIN;Acc:ZDB-GENE-030131-2085]
55. rpl15 ENSDARG00000009285 497.77 3731.30 ribosomal protein L15 [Source:ZFIN;Acc:ZDB-GENE-040801-183]
56. rpl18a ENSDARG00000025073 497.77 3731.30 ribosomal protein L18a [Source:ZFIN;Acc:ZDB-GENE-040426-1071]
57. rpl22l1 ENSDARG00000010244 497.77 3731.30 ribosomal protein L22-like 1 [Source:ZFIN;Acc:ZDB-GENE-060804-3]
58. rpl23 ENSDARG00000053457 497.77 3731.30 ribosomal protein L23 [Source:ZFIN;Acc:ZDB-GENE-030131-8756]
59. rpl26 ENSDARG00000102317 497.77 3731.30 ribosomal protein L26 [Source:ZFIN;Acc:ZDB-GENE-040426-2117]
60. rpl36a ENSDARG00000058105, ENSDARG00000112656 497.77 3731.30 ribosomal protein L36A [Source:ZFIN;Acc:ZDB-GENE-020423-1]
61. rpl8 ENSDARG00000014867 497.77 3731.30 ribosomal protein L8 [Source:ZFIN;Acc:ZDB-GENE-040426-1670]
62. rplp1 ENSDARG00000021864 497.77 3731.30 ribosomal protein, large, P1 [Source:ZFIN;Acc:ZDB-GENE-030131-8663]
63. rps13 ENSDARG00000036298, ENSDARG00000112818 497.77 3731.30 ribosomal protein S13 [Source:ZFIN;Acc:ZDB-GENE-040625-52]
64. rps14 ENSDARG00000036629 497.77 3731.30 ribosomal protein S14 [Source:ZFIN;Acc:ZDB-GENE-030131-8631]
65. rps18 ENSDARG00000100392 497.77 3731.30 ribosomal protein S18 [Source:ZFIN;Acc:ZDB-GENE-020419-20]
66. rps29 ENSDARG00000041232 497.77 3731.30 ribosomal protein S29 [Source:ZFIN;Acc:ZDB-GENE-040622-5]
67. rps4x ENSDARG00000014690 497.77 3731.30 ribosomal protein S4 X-linked [Source:ZFIN;Acc:ZDB-GENE-040927-19]
68. rps5 ENSDARG00000043453 497.77 3731.30 ribosomal protein S5 [Source:ZFIN;Acc:ZDB-GENE-020419-12]
69. rps9 ENSDARG00000011405, ENSDARG00000113248 497.77 3731.30 ribosomal protein S9 [Source:ZFIN;Acc:ZDB-GENE-010724-15]
70. sf3a1 ENSDARG00000041887 497.77 3731.30 splicing factor 3a, subunit 1 [Source:ZFIN;Acc:ZDB-GENE-030616-156]
71. sf3a2 ENSDARG00000021107 497.77 3731.30 splicing factor 3a, subunit 2 [Source:ZFIN;Acc:ZDB-GENE-040426-897]
72. si:dkey-150i13.2 ENSDARG00000071052 497.77 3731.30 si:dkey-150i13.2 [Source:ZFIN;Acc:ZDB-GENE-090312-157]
73. smarca5 ENSDARG00000052348 497.77 3731.30 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 [Source:ZFIN;Acc:ZDB-GENE-021125-1]
74. snrnp70 ENSDARG00000077126 497.77 3731.30 small nuclear ribonucleoprotein 70 (U1) [Source:ZFIN;Acc:ZDB-GENE-040825-2]
75. srpk1a ENSDARG00000073997, ENSDARG00000116973 497.77 3731.30 SRSF protein kinase 1a [Source:ZFIN;Acc:ZDB-GENE-030131-2399]
76. stmn1a ENSDARG00000004169 497.77 3731.30 stathmin 1a [Source:ZFIN;Acc:ZDB-GENE-031006-14]
77. syncrip ENSDARG00000040184 497.77 3731.30 synaptotagmin binding, cytoplasmic RNA interacting protein [Source:ZFIN;Acc:ZDB-GENE-030131-4862]
78. tspan7b ENSDARG00000008407 497.77 3731.30 tetraspanin 7b [Source:ZFIN;Acc:ZDB-GENE-040927-5]
79. ubc ENSDARG00000102632 497.77 3731.30 ubiquitin C [Source:ZFIN;Acc:ZDB-GENE-061110-88]
80. ube2e1 ENSDARG00000116649 497.77 3731.30 ubiquitin-conjugating enzyme E2E 1 [Source:ZFIN;Acc:ZDB-GENE-071004-16]
81. ypel3 ENSDARG00000055510 497.77 3731.30 yippee-like 3 [Source:ZFIN;Acc:ZDB-GENE-030516-4]
82. ywhaqb ENSDARG00000023323 497.77 3731.30 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide b [Source:ZFIN;Acc:ZDB-GENE-030131-7135]
83. zfyve21 ENSDARG00000027887 497.77 3731.30 zinc finger, FYVE domain containing 21 [Source:ZFIN;Acc:ZDB-GENE-030131-1296]
84. zgc:162816 ENSDARG00000070416 497.77 3731.30 zgc:162816 [Source:ZFIN;Acc:ZDB-GENE-070410-94]
85. zgc:162967 zgc:162967 497.77 3731.30
86. zgc:77849 ENSDARG00000012458, ENSDARG00000116615 497.77 3731.30 zgc:77849 [Source:ZFIN;Acc:ZDB-GENE-030131-1107]
87. ABTB2 ABTB2 248.89 1865.69
88. ACVR2B 248.89 1865.69 activin A receptor, type IIB
89. AL954697.2 AL954697.2 248.89 1865.69
90. AMPD2 AMPD2 248.89 1865.69
91. AP3B2 248.89 1865.69 adaptor related protein complex 3 beta 2 subunit, transcript variant X2
92. CABZ01084579.1 CABZ01084579.1 248.89 1865.69
93. CLCN5 CLCN5 248.89 1865.69
94. COL2A1 COL2A1 248.89 1865.69
95. CORO1C CORO1C 248.89 1865.69
96. CPEB2 ENSDARG00000052604 248.89 1865.69 cytoplasmic polyadenylation element binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-130530-639]
97. CR387996.1 ENSDARG00000097774 248.89 1865.69
98. CR954963.1 ENSDARG00000097153 248.89 1865.69
99. CWC15 ENSDARG00000013382 248.89 1865.69 CWC15 spliceosome-associated protein homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040625-10]
100. ENSDARG00000070355 ENSDARG00000070355 248.89 1865.69
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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