Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Zebrafish_28hpf_whole3_PA, section s66.

Sample reads: 133,404. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. AC024175.4 AC024175.4 16642.01 124749.12
2. zgc:112425 zgc:112425 2529.59 18961.90
3. krt4 ENSDARG00000017624, ENSDARG00000115790 1331.36 9979.92 keratin 4 [Source:ZFIN;Acc:ZDB-GENE-000607-83]
4. si:dkey-151g10.6 si:dkey-151g10.6 1331.36 9979.92
5. actb2 ENSDARG00000037870 1065.09 7983.95 actin, beta 2 [Source:ZFIN;Acc:ZDB-GENE-000329-3]
6. mt-co2 ENSDARG00000063908 1065.09 7983.95 cytochrome c oxidase II, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-15]
7. rpl26 ENSDARG00000102317 1065.09 7983.95 ribosomal protein L26 [Source:ZFIN;Acc:ZDB-GENE-040426-2117]
8. mt-nd4 ENSDARG00000063917 931.95 6985.93 NADH dehydrogenase 4, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-10]
9. ppiaa ENSDARG00000009212 931.95 6985.93 peptidylprolyl isomerase Aa (cyclophilin A) [Source:ZFIN;Acc:ZDB-GENE-030131-8556]
10. ptmab ENSDARG00000101766 931.95 6985.93 prothymosin alpha b [Source:ZFIN;Acc:ZDB-GENE-030131-8681]
11. hspa8 ENSDARG00000068992, ENSDARG00000114726 798.82 5987.98 heat shock protein 8 [Source:ZFIN;Acc:ZDB-GENE-990415-92]
12. mt-atp6 ENSDARG00000063911 798.82 5987.98 ATP synthase 6, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-18]
13. mt-nd2 ENSDARG00000063899 798.82 5987.98 NADH dehydrogenase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-8]
14. rpl10a ENSDARG00000042905, ENSDARG00000115649 798.82 5987.98 ribosomal protein L10a [Source:ZFIN;Acc:ZDB-GENE-030131-2025]
15. rps23 ENSDARG00000021838 798.82 5987.98 ribosomal protein S23 [Source:ZFIN;Acc:ZDB-GENE-080220-50]
16. tmsb4x ENSDARG00000077777 798.82 5987.98 thymosin beta 4 X-linked [Source:ZFIN;Acc:ZDB-GENE-030131-8304]
17. AL954137.2 ENSDARG00000114408 665.68 4989.96
18. hmga1a ENSDARG00000028335 665.68 4989.96 high mobility group AT-hook 1a [Source:ZFIN;Acc:ZDB-GENE-010502-1]
19. hsp90ab1 ENSDARG00000029150 665.68 4989.96 heat shock protein 90, alpha (cytosolic), class B member 1 [Source:ZFIN;Acc:ZDB-GENE-990415-95]
20. mt-co3 ENSDARG00000063912 665.68 4989.96 cytochrome c oxidase III, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-16]
21. pabpc1a ENSDARG00000017219 665.68 4989.96 poly(A) binding protein, cytoplasmic 1a [Source:ZFIN;Acc:ZDB-GENE-030131-3238]
22. eef1a1l1 ENSDARG00000020850 532.54 3991.94 eukaryotic translation elongation factor 1 alpha 1, like 1 [Source:ZFIN;Acc:ZDB-GENE-990415-52]
23. eef2b ENSDARG00000100371, ENSDARG00000109247 532.54 3991.94 eukaryotic translation elongation factor 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5128]
24. gnao1a ENSDARG00000016676 532.54 3991.94 guanine nucleotide binding protein (G protein), alpha activating activity polypeptide O, a [Source:ZFIN;Acc:ZDB-GENE-040426-1757]
25. h3f3a 532.54 3991.94 H3 histone, family 3A, transcript variant X1
26. hmgn2 ENSDARG00000099572 532.54 3991.94 high mobility group nucleosomal binding domain 2 [Source:ZFIN;Acc:ZDB-GENE-051030-81]
27. mt-nd1 ENSDARG00000063895 532.54 3991.94 NADH dehydrogenase 1, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-7]
28. pnrc2 ENSDARG00000053291, ENSDARG00000112537 532.54 3991.94 proline-rich nuclear receptor coactivator 2 [Source:ZFIN;Acc:ZDB-GENE-030131-5475]
29. rpl18a ENSDARG00000025073 532.54 3991.94 ribosomal protein L18a [Source:ZFIN;Acc:ZDB-GENE-040426-1071]
30. rplp1 ENSDARG00000021864 532.54 3991.94 ribosomal protein, large, P1 [Source:ZFIN;Acc:ZDB-GENE-030131-8663]
31. rps14 ENSDARG00000036629 532.54 3991.94 ribosomal protein S14 [Source:ZFIN;Acc:ZDB-GENE-030131-8631]
32. rps5 ENSDARG00000043453 532.54 3991.94 ribosomal protein S5 [Source:ZFIN;Acc:ZDB-GENE-020419-12]
33. actb1 ENSDARG00000037746, ENSDARG00000113649 399.41 2993.99 actin, beta 1 [Source:ZFIN;Acc:ZDB-GENE-000329-1]
34. ccnb1 ENSDARG00000051923 399.41 2993.99 cyclin B1 [Source:ZFIN;Acc:ZDB-GENE-000406-10]
35. ehmt2 ENSDARG00000102325 399.41 2993.99 euchromatic histone-lysine N-methyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-010501-6]
36. gnb2l1 399.41 2993.99 guanine nucleotide binding protein (G protein), beta polypeptide 2-like 1
37. hmga2 ENSDARG00000069912 399.41 2993.99 high mobility group AT-hook 2 [Source:ZFIN;Acc:ZDB-GENE-030131-3148]
38. hpca ENSDARG00000018397, ENSDARG00000110115 399.41 2993.99 hippocalcin [Source:ZFIN;Acc:ZDB-GENE-040426-1683]
39. id1 ENSDARG00000040764 399.41 2993.99 inhibitor of DNA binding 1 [Source:ZFIN;Acc:ZDB-GENE-990415-96]
40. khdrbs1a ENSDARG00000052856 399.41 2993.99 KH domain containing, RNA binding, signal transduction associated 1a [Source:ZFIN;Acc:ZDB-GENE-000210-25]
41. lrrfip2 ENSDARG00000010400 399.41 2993.99 leucine rich repeat (in FLII) interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-7781]
42. mt-co1 ENSDARG00000063905 399.41 2993.99 cytochrome c oxidase I, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-14]
43. nucks1a ENSDARG00000078473 399.41 2993.99 nuclear casein kinase and cyclin-dependent kinase substrate 1a [Source:ZFIN;Acc:ZDB-GENE-040912-175]
44. pbx4 ENSDARG00000052150 399.41 2993.99 pre-B-cell leukemia transcription factor 4 [Source:ZFIN;Acc:ZDB-GENE-000201-18]
45. ran ENSDARG00000057026 399.41 2993.99 RAN, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-990415-88]
46. rpl18 ENSDARG00000029533 399.41 2993.99 ribosomal protein L18 [Source:ZFIN;Acc:ZDB-GENE-040801-165]
47. rpl23 ENSDARG00000053457 399.41 2993.99 ribosomal protein L23 [Source:ZFIN;Acc:ZDB-GENE-030131-8756]
48. rpl36 ENSDARG00000100588 399.41 2993.99 ribosomal protein L36 [Source:ZFIN;Acc:ZDB-GENE-040622-2]
49. rps19 ENSDARG00000030602 399.41 2993.99 ribosomal protein S19 [Source:ZFIN;Acc:ZDB-GENE-040426-1716]
50. rps4x ENSDARG00000014690 399.41 2993.99 ribosomal protein S4 X-linked [Source:ZFIN;Acc:ZDB-GENE-040927-19]
51. rps6 ENSDARG00000019778 399.41 2993.99 ribosomal protein S6 [Source:ZFIN;Acc:ZDB-GENE-040801-8]
52. rps7 ENSDARG00000042566 399.41 2993.99 ribosomal protein S7 [Source:ZFIN;Acc:ZDB-GENE-040426-1718]
53. tmem135 ENSDARG00000069157 399.41 2993.99 transmembrane protein 135 [Source:ZFIN;Acc:ZDB-GENE-070424-70]
54. top1l ENSDARG00000070545 399.41 2993.99 DNA topoisomerase I, like [Source:ZFIN;Acc:ZDB-GENE-060616-217]
55. wu:fb37b09 wu:fb37b09 399.41 2993.99
56. zgc:162356 zgc:162356 399.41 2993.99
57. AL954697.2 AL954697.2 266.27 1995.97
58. BX294434.1 ENSDARG00000061272 266.27 1995.97 solute carrier family 41 member 1 [Source:NCBI gene;Acc:564564]
59. CASKIN2_1 CASKIN2_1 266.27 1995.97
60. COL2A1 COL2A1 266.27 1995.97
61. COLGALT1 ENSDARG00000073974 266.27 1995.97 collagen beta(1-O)galactosyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-070720-6]
62. HIST1H4C HIST1H4C 266.27 1995.97
63. RPL29 ENSDARG00000077717 266.27 1995.97 ribosomal protein L29 [Source:ZFIN;Acc:ZDB-GENE-040801-167]
64. ZNF609 ZNF609 266.27 1995.97
65. abca1b ENSDARG00000079009 266.27 1995.97 ATP-binding cassette, sub-family A (ABC1), member 1B [Source:ZFIN;Acc:ZDB-GENE-030131-9826]
66. apobb apobb 266.27 1995.97
67. apoc1l apoc1l 266.27 1995.97
68. apoeb ENSDARG00000040295 266.27 1995.97 apolipoprotein Eb [Source:ZFIN;Acc:ZDB-GENE-980526-368]
69. brd7 ENSDARG00000008380 266.27 1995.97 bromodomain containing 7 [Source:ZFIN;Acc:ZDB-GENE-040426-2687]
70. btbd10b ENSDARG00000020252 266.27 1995.97 BTB (POZ) domain containing 10b [Source:ZFIN;Acc:ZDB-GENE-080104-5]
71. btf3 ENSDARG00000035400, ENSDARG00000116462 266.27 1995.97 basic transcription factor 3 [Source:ZFIN;Acc:ZDB-GENE-030131-8731]
72. ccnd1 ENSDARG00000101637 266.27 1995.97 cyclin D1 [Source:ZFIN;Acc:ZDB-GENE-980526-176]
73. cdkn2aipnl ENSDARG00000053395 266.27 1995.97 CDKN2A interacting protein N-terminal like [Source:ZFIN;Acc:ZDB-GENE-041010-154]
74. cirbp cirbp 266.27 1995.97
75. cnn3b ENSDARG00000029856 266.27 1995.97 calponin 3, acidic b [Source:ZFIN;Acc:ZDB-GENE-050522-263]
76. dla ENSDARG00000010791 266.27 1995.97 deltaA [Source:ZFIN;Acc:ZDB-GENE-980526-29]
77. dnaja2 ENSDARG00000104066 266.27 1995.97 DnaJ (Hsp40) homolog, subfamily A, member 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2884]
78. edf1 ENSDARG00000009950 266.27 1995.97 endothelial differentiation-related factor 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1710]
79. eef1g ENSDARG00000056119 266.27 1995.97 eukaryotic translation elongation factor 1 gamma [Source:ZFIN;Acc:ZDB-GENE-020423-3]
80. eif2s3 ENSDARG00000008292 266.27 1995.97 eukaryotic translation initiation factor 2, subunit 3 gamma [Source:ZFIN;Acc:ZDB-GENE-030131-5552]
81. eif3s10 ENSDARG00000076815 266.27 1995.97 eukaryotic translation initiation factor 3, subunit 10 (theta) [Source:ZFIN;Acc:ZDB-GENE-030131-5726]
82. eif4a1b ENSDARG00000003032, ENSDARG00000116907 266.27 1995.97 eukaryotic translation initiation factor 4A1B [Source:ZFIN;Acc:ZDB-GENE-040120-6]
83. frem1b ENSDARG00000062402 266.27 1995.97 Fras1 related extracellular matrix 1b [Source:ZFIN;Acc:ZDB-GENE-050208-783]
84. fubp1 ENSDARG00000029248 266.27 1995.97 far upstream element (FUSE) binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2159]
85. gamt ENSDARG00000070844, ENSDARG00000109945 266.27 1995.97 guanidinoacetate N-methyltransferase [Source:ZFIN;Acc:ZDB-GENE-051030-97]
86. gars ENSDARG00000059070 266.27 1995.97 glycyl-tRNA synthetase [Source:ZFIN;Acc:ZDB-GENE-030131-9174]
87. gon4l ENSDARG00000005867 266.27 1995.97 gon-4-like (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-070117-2447]
88. h3f3d ENSDARG00000045248 266.27 1995.97 H3 histone, family 3D [Source:ZFIN;Acc:ZDB-GENE-040426-1023]
89. hnrnpa0a ENSDARG00000089302 266.27 1995.97 heterogeneous nuclear ribonucleoprotein A0a [Source:ZFIN;Acc:ZDB-GENE-030131-2249]
90. khdrbs1b ENSDARG00000070475 266.27 1995.97 KH domain containing, RNA binding, signal transduction associated 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2344]
91. lasp1 ENSDARG00000057867 266.27 1995.97 LIM and SH3 protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-1936]
92. lmnb2 ENSDARG00000101624 266.27 1995.97 lamin B2 [Source:ZFIN;Acc:ZDB-GENE-990630-13]
93. mt-nd3 ENSDARG00000063914 266.27 1995.97 NADH dehydrogenase 3, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-9]
94. myl12.1 ENSDARG00000099766 266.27 1995.97 myosin, light chain 12, genome duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4918]
95. myo9al1 myo9al1 266.27 1995.97
96. nkx6.2 ENSDARG00000104735 266.27 1995.97 NK6 homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-070626-1]
97. npm1b ENSDARG00000037675 266.27 1995.97 nucleophosmin 1b [Source:ZFIN;Acc:ZDB-GENE-080723-7]
98. nt5dc2 ENSDARG00000059646 266.27 1995.97 5'-nucleotidase domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-060810-17]
99. nup98 ENSDARG00000074955 266.27 1995.97 nucleoporin 98 [Source:ZFIN;Acc:ZDB-GENE-040426-1180]
100. pcdh18a ENSDARG00000089805 266.27 1995.97 protocadherin 18a [Source:ZFIN;Acc:ZDB-GENE-000607-1]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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