Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Zebrafish_28hpf_whole3_PA, section s64.

Sample reads: 133,402. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. AC024175.4 AC024175.4 6063.74 45454.55
2. BX088708.1 BX088708.1 6063.74 45454.55
3. krt4 ENSDARG00000017624, ENSDARG00000115790 6063.74 45454.55 keratin 4 [Source:ZFIN;Acc:ZDB-GENE-000607-83]
4. rpsa ENSDARG00000019181 6063.74 45454.55 ribosomal protein SA [Source:ZFIN;Acc:ZDB-GENE-040426-811]
5. CABZ01080098.1 ENSDARG00000110680 3031.87 22727.27
6. CU862021.1 CU862021.1 3031.87 22727.27
7. FP102272.1 FP102272.1 3031.87 22727.27
8. RFC4 ENSDARG00000042458 3031.87 22727.27 replication factor C (activator 1) 4 [Source:ZFIN;Acc:ZDB-GENE-040824-3]
9. actb2 ENSDARG00000037870 3031.87 22727.27 actin, beta 2 [Source:ZFIN;Acc:ZDB-GENE-000329-3]
10. aldoaa ENSDARG00000011665 3031.87 22727.27 aldolase a, fructose-bisphosphate, a [Source:ZFIN;Acc:ZDB-GENE-030131-8369]
11. aldob ENSDARG00000053684 3031.87 22727.27 aldolase b, fructose-bisphosphate [Source:ZFIN;Acc:ZDB-GENE-030131-383]
12. calm2a ENSDARG00000031427, ENSDARG00000111871 3031.87 22727.27 calmodulin 2a (phosphorylase kinase, delta) [Source:ZFIN;Acc:ZDB-GENE-030804-3]
13. cmn ENSDARG00000055527 3031.87 22727.27 calymmin [Source:ZFIN;Acc:ZDB-GENE-000208-9]
14. ddx21 ENSDARG00000063626 3031.87 22727.27 DEAD (Asp-Glu-Ala-Asp) box helicase 21 [Source:ZFIN;Acc:ZDB-GENE-031113-10]
15. ddx39ab ENSDARG00000015111 3031.87 22727.27 DEAD (Asp-Glu-Ala-Asp) box polypeptide 39Ab [Source:ZFIN;Acc:ZDB-GENE-040426-2902]
16. extl3 ENSDARG00000026811 3031.87 22727.27 exostosin-like glycosyltransferase 3 [Source:ZFIN;Acc:ZDB-GENE-041124-2]
17. hif1al ENSDARG00000100826 3031.87 22727.27 hypoxia inducible factor 1 subunit alpha, like [Source:ZFIN;Acc:ZDB-GENE-040426-1315]
18. hsp90ab1 ENSDARG00000029150 3031.87 22727.27 heat shock protein 90, alpha (cytosolic), class B member 1 [Source:ZFIN;Acc:ZDB-GENE-990415-95]
19. icn ENSDARG00000009978 3031.87 22727.27 ictacalcin [Source:ZFIN;Acc:ZDB-GENE-030131-8599]
20. ints12 ENSDARG00000091678 3031.87 22727.27 integrator complex subunit 12 [Source:ZFIN;Acc:ZDB-GENE-040625-178]
21. las1l ENSDARG00000062457, ENSDARG00000114475 3031.87 22727.27 LAS1-like, ribosome biogenesis factor [Source:ZFIN;Acc:ZDB-GENE-030131-3625]
22. lmo3 ENSDARG00000008720, ENSDARG00000114518 3031.87 22727.27 LIM domain only 3 [Source:ZFIN;Acc:ZDB-GENE-050522-201]
23. mt-co2 ENSDARG00000063908 3031.87 22727.27 cytochrome c oxidase II, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-15]
24. ppiaa ENSDARG00000009212 3031.87 22727.27 peptidylprolyl isomerase Aa (cyclophilin A) [Source:ZFIN;Acc:ZDB-GENE-030131-8556]
25. ppm1da ENSDARG00000009273 3031.87 22727.27 protein phosphatase, Mg2+/Mn2+ dependent, 1Da [Source:ZFIN;Acc:ZDB-GENE-040426-815]
26. ptmab ENSDARG00000101766 3031.87 22727.27 prothymosin alpha b [Source:ZFIN;Acc:ZDB-GENE-030131-8681]
27. rap1a rap1a 3031.87 22727.27
28. rpl36a ENSDARG00000058105, ENSDARG00000112656 3031.87 22727.27 ribosomal protein L36A [Source:ZFIN;Acc:ZDB-GENE-020423-1]
29. rpl38 ENSDARG00000006413 3031.87 22727.27 ribosomal protein L38 [Source:ZFIN;Acc:ZDB-GENE-030131-8752]
30. rplp0 ENSDARG00000051783 3031.87 22727.27 ribosomal protein, large, P0 [Source:ZFIN;Acc:ZDB-GENE-000629-1]
31. rps23 ENSDARG00000021838 3031.87 22727.27 ribosomal protein S23 [Source:ZFIN;Acc:ZDB-GENE-080220-50]
32. rps25 ENSDARG00000041811 3031.87 22727.27 ribosomal protein S25 [Source:ZFIN;Acc:ZDB-GENE-040426-1788]
33. rps26l ENSDARG00000030408 3031.87 22727.27 ribosomal protein S26, like [Source:ZFIN;Acc:ZDB-GENE-040426-1706]
34. sesn3 ENSDARG00000015822 3031.87 22727.27 sestrin 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2924]
35. si:ch73-21g5.7 ENSDARG00000093156 3031.87 22727.27 si:ch73-21g5.7 [Source:ZFIN;Acc:ZDB-GENE-081104-260]
36. snrnp200 ENSDARG00000077536, ENSDARG00000114486 3031.87 22727.27 small nuclear ribonucleoprotein 200 (U5) [Source:ZFIN;Acc:ZDB-GENE-081105-64]
37. strap ENSDARG00000007405 3031.87 22727.27 serine/threonine kinase receptor associated protein [Source:ZFIN;Acc:ZDB-GENE-040426-1110]
38. tox ENSDARG00000032317 3031.87 22727.27 thymocyte selection-associated high mobility group box [Source:ZFIN;Acc:ZDB-GENE-070912-181]
39. zgc:112425 zgc:112425 3031.87 22727.27
40. zgc:174153 ENSDARG00000079376 3031.87 22727.27 zgc:174153 [Source:ZFIN;Acc:ZDB-GENE-080215-7]
41. 5S_rRNA 5S_rRNA 0.00 0.00
42. 5S_rRNA_1 5S_rRNA_1 0.00 0.00
43. 5S_rRNA_10 5S_rRNA_10 0.00 0.00
44. 5S_rRNA_11 5S_rRNA_11 0.00 0.00
45. 5S_rRNA_12 5S_rRNA_12 0.00 0.00
46. 5S_rRNA_13 5S_rRNA_13 0.00 0.00
47. 5S_rRNA_14 5S_rRNA_14 0.00 0.00
48. 5S_rRNA_15 5S_rRNA_15 0.00 0.00
49. 5S_rRNA_16 5S_rRNA_16 0.00 0.00
50. 5S_rRNA_17 5S_rRNA_17 0.00 0.00
51. 5S_rRNA_18 5S_rRNA_18 0.00 0.00
52. 5S_rRNA_19 5S_rRNA_19 0.00 0.00
53. 5S_rRNA_2 5S_rRNA_2 0.00 0.00
54. 5S_rRNA_20 5S_rRNA_20 0.00 0.00
55. 5S_rRNA_21 5S_rRNA_21 0.00 0.00
56. 5S_rRNA_22 5S_rRNA_22 0.00 0.00
57. 5S_rRNA_23 5S_rRNA_23 0.00 0.00
58. 5S_rRNA_24 5S_rRNA_24 0.00 0.00
59. 5S_rRNA_25 5S_rRNA_25 0.00 0.00
60. 5S_rRNA_26 5S_rRNA_26 0.00 0.00
61. 5S_rRNA_27 5S_rRNA_27 0.00 0.00
62. 5S_rRNA_28 5S_rRNA_28 0.00 0.00
63. 5S_rRNA_29 5S_rRNA_29 0.00 0.00
64. 5S_rRNA_3 5S_rRNA_3 0.00 0.00
65. 5S_rRNA_30 5S_rRNA_30 0.00 0.00
66. 5S_rRNA_31 5S_rRNA_31 0.00 0.00
67. 5S_rRNA_4 5S_rRNA_4 0.00 0.00
68. 5S_rRNA_5 5S_rRNA_5 0.00 0.00
69. 5S_rRNA_6 5S_rRNA_6 0.00 0.00
70. 5S_rRNA_7 5S_rRNA_7 0.00 0.00
71. 5S_rRNA_8 5S_rRNA_8 0.00 0.00
72. 5S_rRNA_9 5S_rRNA_9 0.00 0.00
73. 5_8S_rRNA 5_8S_rRNA 0.00 0.00
74. 5_8S_rRNA_1 5_8S_rRNA_1 0.00 0.00
75. 5_8S_rRNA_2 5_8S_rRNA_2 0.00 0.00
76. 5_8S_rRNA_3 5_8S_rRNA_3 0.00 0.00
77. 5_8S_rRNA_4 5_8S_rRNA_4 0.00 0.00
78. 5_8S_rRNA_5 5_8S_rRNA_5 0.00 0.00
79. AADAT ENSDARG00000011410 0.00 0.00 aminoadipate aminotransferase [Source:ZFIN;Acc:ZDB-GENE-111229-1]
80. AAED1 ENSDARG00000075299 0.00 0.00 AhpC/TSA antioxidant enzyme domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-110914-194]
81. AAK1 AAK1 0.00 0.00
82. ABCA7 ABCA7 0.00 0.00
83. ABCC1 ENSDARG00000104719 0.00 0.00 ATP-binding cassette, sub-family C (CFTR/MRP), member 1 [Source:ZFIN;Acc:ZDB-GENE-050517-15]
84. ABCC10 ENSDARG00000077988, ENSDARG00000111885, ENSDARG00000113210 0.00 0.00 ATP-binding cassette, sub-family C (CFTR/MRP), member 10 [Source:ZFIN;Acc:ZDB-GENE-050517-24]
85. ABCC3 ENSDARG00000096662 0.00 0.00 ATP-binding cassette, sub-family C (CFTR/MRP), member 3 [Source:ZFIN;Acc:ZDB-GENE-050517-16]
86. ABCC6 ABCC6 0.00 0.00
87. ABCC6_1 ABCC6_1 0.00 0.00
88. ABCD2 ENSDARG00000059409 0.00 0.00 ATP-binding cassette, sub-family D (ALD), member 2 [Source:ZFIN;Acc:ZDB-GENE-050517-28]
89. ABCD2_1 ABCD2_1 0.00 0.00
90. ABCF3 ENSDARG00000089705 0.00 0.00 ATP-binding cassette, sub-family F (GCN20), member 3 [Source:ZFIN;Acc:ZDB-GENE-050517-32]
91. ABHD12B ABHD12B 0.00 0.00
92. ABHD12B_1 ABHD12B_1 0.00 0.00
93. ABHD15 ABHD15 0.00 0.00
94. ABHD17A ABHD17A 0.00 0.00
95. ABHD17A_1 ABHD17A_1 0.00 0.00
96. ABI3 ABI3 0.00 0.00
97. ABI3BP 0.00 0.00 ABI family member 3 binding protein, transcript variant X3
98. ABI3_1 ABI3_1 0.00 0.00
99. ABR ENSDARG00000095180 0.00 0.00 ABR, RhoGEF and GTPase activating protein [Source:ZFIN;Acc:ZDB-GENE-070705-146]
100. ABR_1 ABR_1 0.00 0.00
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA