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Experiment Zebrafish_28hpf_whole3_PA, section s63.

Sample reads: 133,402. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. ppiaa ENSDARG00000009212 7622.99 57142.79 peptidylprolyl isomerase Aa (cyclophilin A) [Source:ZFIN;Acc:ZDB-GENE-030131-8556]
2. AC024175.4 AC024175.4 5717.25 42857.15
3. tegt ENSDARG00000077934 5717.25 42857.15 testis enhanced gene transcript (BAX inhibitor 1) [Source:ZFIN;Acc:ZDB-GENE-030826-10]
4. anp32b ENSDARG00000023330 3811.50 28571.43 acidic (leucine-rich) nuclear phosphoprotein 32 family, member B [Source:ZFIN;Acc:ZDB-GENE-030131-719]
5. mt-co2 ENSDARG00000063908 3811.50 28571.43 cytochrome c oxidase II, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-15]
6. rbb4 rbb4 3811.50 28571.43
7. rpl27 ENSDARG00000015128 3811.50 28571.43 ribosomal protein L27 [Source:ZFIN;Acc:ZDB-GENE-030131-4343]
8. taf9 ENSDARG00000077870 3811.50 28571.43 TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor [Source:ZFIN;Acc:ZDB-GENE-030131-204]
9. tmsb4x ENSDARG00000077777 3811.50 28571.43 thymosin beta 4 X-linked [Source:ZFIN;Acc:ZDB-GENE-030131-8304]
10. uqcrq ENSDARG00000029064, ENSDARG00000116372 3811.50 28571.43 ubiquinol-cytochrome c reductase, complex III subunit VII [Source:ZFIN;Acc:ZDB-GENE-040718-199]
11. C25H1orf51 C25H1orf51 1905.75 14285.72
12. FOXK2 ENSDARG00000030583 1905.75 14285.72 forkhead box K2 [Source:ZFIN;Acc:ZDB-GENE-030131-2861]
13. acyp1 ENSDARG00000060126 1905.75 14285.72 acylphosphatase 1, erythrocyte (common) type [Source:ZFIN;Acc:ZDB-GENE-050309-125]
14. anxa1a ENSDARG00000026726 1905.75 14285.72 annexin A1a [Source:ZFIN;Acc:ZDB-GENE-030131-6664]
15. apoa1a ENSDARG00000012076, ENSDARG00000110395 1905.75 14285.72 apolipoprotein A-Ia [Source:ZFIN;Acc:ZDB-GENE-990415-14]
16. atp5g1 1905.75 14285.72 ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C1 (subunit 9)
17. atp5h 1905.75 14285.72 ATP synthase, H+ transporting, mitochondrial Fo complex, subunit d, transcript variant X1
18. capns1b ENSDARG00000013804 1905.75 14285.72 calpain, small subunit 1 b [Source:ZFIN;Acc:ZDB-GENE-030131-5206]
19. ccnd1 ENSDARG00000101637 1905.75 14285.72 cyclin D1 [Source:ZFIN;Acc:ZDB-GENE-980526-176]
20. eef2b ENSDARG00000100371, ENSDARG00000109247 1905.75 14285.72 eukaryotic translation elongation factor 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5128]
21. fbxo28 ENSDARG00000027159 1905.75 14285.72 F-box protein 28 [Source:ZFIN;Acc:ZDB-GENE-030131-4665]
22. furina ENSDARG00000062909, ENSDARG00000117158 1905.75 14285.72 furin (paired basic amino acid cleaving enzyme) a [Source:ZFIN;Acc:ZDB-GENE-040901-1]
23. hdac1 ENSDARG00000015427 1905.75 14285.72 histone deacetylase 1 [Source:ZFIN;Acc:ZDB-GENE-020419-32]
24. krt4 ENSDARG00000017624, ENSDARG00000115790 1905.75 14285.72 keratin 4 [Source:ZFIN;Acc:ZDB-GENE-000607-83]
25. mrps25 ENSDARG00000041306 1905.75 14285.72 mitochondrial ribosomal protein S25 [Source:ZFIN;Acc:ZDB-GENE-050417-52]
26. mt-co3 ENSDARG00000063912 1905.75 14285.72 cytochrome c oxidase III, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-16]
27. mt-nd4 ENSDARG00000063917 1905.75 14285.72 NADH dehydrogenase 4, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-10]
28. ncalda ENSDARG00000070688 1905.75 14285.72 neurocalcin delta a [Source:ZFIN;Acc:ZDB-GENE-080220-28]
29. ndrg3b ENSDARG00000010052, ENSDARG00000109420 1905.75 14285.72 ndrg family member 3b [Source:ZFIN;Acc:ZDB-GENE-030131-5606]
30. nip7 ENSDARG00000059075 1905.75 14285.72 NIP7, nucleolar pre-rRNA processing protein [Source:ZFIN;Acc:ZDB-GENE-050522-256]
31. nrp2a_1 ENSDARG00000096546 1905.75 14285.72 neuropilin 2a [Source:ZFIN;Acc:ZDB-GENE-040611-2]
32. pcgf6 ENSDARG00000069681 1905.75 14285.72 polycomb group ring finger 6 [Source:ZFIN;Acc:ZDB-GENE-060526-178]
33. phgdh ENSDARG00000001873 1905.75 14285.72 phosphoglycerate dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-030131-647]
34. ppp5c ENSDARG00000034313 1905.75 14285.72 protein phosphatase 5, catalytic subunit [Source:ZFIN;Acc:ZDB-GENE-050327-75]
35. ptmab ENSDARG00000101766 1905.75 14285.72 prothymosin alpha b [Source:ZFIN;Acc:ZDB-GENE-030131-8681]
36. ptprnb ENSDARG00000077047 1905.75 14285.72 protein tyrosine phosphatase, receptor type, Nb [Source:ZFIN;Acc:ZDB-GENE-100505-1]
37. rpl13a ENSDARG00000044093, ENSDARG00000116541 1905.75 14285.72 ribosomal protein L13a [Source:ZFIN;Acc:ZDB-GENE-030131-168]
38. rpl18a ENSDARG00000025073 1905.75 14285.72 ribosomal protein L18a [Source:ZFIN;Acc:ZDB-GENE-040426-1071]
39. rplp1 ENSDARG00000021864 1905.75 14285.72 ribosomal protein, large, P1 [Source:ZFIN;Acc:ZDB-GENE-030131-8663]
40. rps15a ENSDARG00000010160 1905.75 14285.72 ribosomal protein S15a [Source:ZFIN;Acc:ZDB-GENE-030131-8708]
41. rps23 ENSDARG00000021838 1905.75 14285.72 ribosomal protein S23 [Source:ZFIN;Acc:ZDB-GENE-080220-50]
42. rps25 ENSDARG00000041811 1905.75 14285.72 ribosomal protein S25 [Source:ZFIN;Acc:ZDB-GENE-040426-1788]
43. sap130a ENSDARG00000056924 1905.75 14285.72 Sin3A-associated protein a [Source:ZFIN;Acc:ZDB-GENE-070615-5]
44. sh3kbp1 ENSDARG00000075853 1905.75 14285.72 SH3-domain kinase binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-091204-186]
45. si:dkey-151g10.6 si:dkey-151g10.6 1905.75 14285.72
46. si:dkey-191j3.3 si:dkey-191j3.3 1905.75 14285.72
47. six3b ENSDARG00000054879 1905.75 14285.72 SIX homeobox 3b [Source:ZFIN;Acc:ZDB-GENE-990415-128]
48. snap25a ENSDARG00000020609 1905.75 14285.72 synaptosomal-associated protein, 25a [Source:ZFIN;Acc:ZDB-GENE-980526-468]
49. tnnc2 ENSDARG00000070835, ENSDARG00000111155 1905.75 14285.72 troponin C type 2 (fast) [Source:ZFIN;Acc:ZDB-GENE-000322-2]
50. tpma ENSDARG00000033683 1905.75 14285.72 alpha-tropomyosin [Source:ZFIN;Acc:ZDB-GENE-990415-269]
51. uba52 ENSDARG00000041435 1905.75 14285.72 ubiquitin A-52 residue ribosomal protein fusion product 1 [Source:ZFIN;Acc:ZDB-GENE-051023-7]
52. vps35 ENSDARG00000008224 1905.75 14285.72 vacuolar protein sorting 35 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-2042]
53. zgc:112425 zgc:112425 1905.75 14285.72
54. zgc:158409 zgc:158409 1905.75 14285.72
55. zgc:92533 zgc:92533 1905.75 14285.72
56. znf706 ENSDARG00000056307 1905.75 14285.72 zinc finger protein 706 [Source:ZFIN;Acc:ZDB-GENE-040718-454]
57. 5S_rRNA 5S_rRNA 0.00 0.00
58. 5S_rRNA_1 5S_rRNA_1 0.00 0.00
59. 5S_rRNA_10 5S_rRNA_10 0.00 0.00
60. 5S_rRNA_11 5S_rRNA_11 0.00 0.00
61. 5S_rRNA_12 5S_rRNA_12 0.00 0.00
62. 5S_rRNA_13 5S_rRNA_13 0.00 0.00
63. 5S_rRNA_14 5S_rRNA_14 0.00 0.00
64. 5S_rRNA_15 5S_rRNA_15 0.00 0.00
65. 5S_rRNA_16 5S_rRNA_16 0.00 0.00
66. 5S_rRNA_17 5S_rRNA_17 0.00 0.00
67. 5S_rRNA_18 5S_rRNA_18 0.00 0.00
68. 5S_rRNA_19 5S_rRNA_19 0.00 0.00
69. 5S_rRNA_2 5S_rRNA_2 0.00 0.00
70. 5S_rRNA_20 5S_rRNA_20 0.00 0.00
71. 5S_rRNA_21 5S_rRNA_21 0.00 0.00
72. 5S_rRNA_22 5S_rRNA_22 0.00 0.00
73. 5S_rRNA_23 5S_rRNA_23 0.00 0.00
74. 5S_rRNA_24 5S_rRNA_24 0.00 0.00
75. 5S_rRNA_25 5S_rRNA_25 0.00 0.00
76. 5S_rRNA_26 5S_rRNA_26 0.00 0.00
77. 5S_rRNA_27 5S_rRNA_27 0.00 0.00
78. 5S_rRNA_28 5S_rRNA_28 0.00 0.00
79. 5S_rRNA_29 5S_rRNA_29 0.00 0.00
80. 5S_rRNA_3 5S_rRNA_3 0.00 0.00
81. 5S_rRNA_30 5S_rRNA_30 0.00 0.00
82. 5S_rRNA_31 5S_rRNA_31 0.00 0.00
83. 5S_rRNA_4 5S_rRNA_4 0.00 0.00
84. 5S_rRNA_5 5S_rRNA_5 0.00 0.00
85. 5S_rRNA_6 5S_rRNA_6 0.00 0.00
86. 5S_rRNA_7 5S_rRNA_7 0.00 0.00
87. 5S_rRNA_8 5S_rRNA_8 0.00 0.00
88. 5S_rRNA_9 5S_rRNA_9 0.00 0.00
89. 5_8S_rRNA 5_8S_rRNA 0.00 0.00
90. 5_8S_rRNA_1 5_8S_rRNA_1 0.00 0.00
91. 5_8S_rRNA_2 5_8S_rRNA_2 0.00 0.00
92. 5_8S_rRNA_3 5_8S_rRNA_3 0.00 0.00
93. 5_8S_rRNA_4 5_8S_rRNA_4 0.00 0.00
94. 5_8S_rRNA_5 5_8S_rRNA_5 0.00 0.00
95. AADAT ENSDARG00000011410 0.00 0.00 aminoadipate aminotransferase [Source:ZFIN;Acc:ZDB-GENE-111229-1]
96. AAED1 ENSDARG00000075299 0.00 0.00 AhpC/TSA antioxidant enzyme domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-110914-194]
97. AAK1 AAK1 0.00 0.00
98. ABCA7 ABCA7 0.00 0.00
99. ABCC1 ENSDARG00000104719 0.00 0.00 ATP-binding cassette, sub-family C (CFTR/MRP), member 1 [Source:ZFIN;Acc:ZDB-GENE-050517-15]
100. ABCC10 ENSDARG00000077988, ENSDARG00000111885, ENSDARG00000113210 0.00 0.00 ATP-binding cassette, sub-family C (CFTR/MRP), member 10 [Source:ZFIN;Acc:ZDB-GENE-050517-24]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA