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Experiment Zebrafish_28hpf_whole3_PA, section s62.

Sample reads: 133,403. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. AC024175.4 AC024175.4 11475.47 86021.09
2. hmga1a ENSDARG00000028335 2008.21 15053.71 high mobility group AT-hook 1a [Source:ZFIN;Acc:ZDB-GENE-010502-1]
3. krt4 ENSDARG00000017624, ENSDARG00000115790 1721.32 12903.16 keratin 4 [Source:ZFIN;Acc:ZDB-GENE-000607-83]
4. mt-nd4 ENSDARG00000063917 1721.32 12903.16 NADH dehydrogenase 4, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-10]
5. mt-nd2 ENSDARG00000063899 1434.43 10752.61 NADH dehydrogenase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-8]
6. ppiaa ENSDARG00000009212 1434.43 10752.61 peptidylprolyl isomerase Aa (cyclophilin A) [Source:ZFIN;Acc:ZDB-GENE-030131-8556]
7. ptmab ENSDARG00000101766 1434.43 10752.61 prothymosin alpha b [Source:ZFIN;Acc:ZDB-GENE-030131-8681]
8. rpl19 ENSDARG00000013307 1434.43 10752.61 ribosomal protein L19 [Source:ZFIN;Acc:ZDB-GENE-040426-2290]
9. zgc:112425 zgc:112425 1434.43 10752.61
10. dbx2 1147.55 8602.13 developing brain homeobox 2
11. hmgn2 ENSDARG00000099572 1147.55 8602.13 high mobility group nucleosomal binding domain 2 [Source:ZFIN;Acc:ZDB-GENE-051030-81]
12. mt-co3 ENSDARG00000063912 1147.55 8602.13 cytochrome c oxidase III, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-16]
13. si:ch1073-429i10.3 1147.55 8602.13 si:ch1073-429i10.3, transcript variant X2
14. si:dkey-151g10.6 si:dkey-151g10.6 1147.55 8602.13
15. ZBTB22 ZBTB22 860.66 6451.58
16. arf2 arf2 860.66 6451.58
17. hspa8 ENSDARG00000068992, ENSDARG00000114726 860.66 6451.58 heat shock protein 8 [Source:ZFIN;Acc:ZDB-GENE-990415-92]
18. id1 ENSDARG00000040764 860.66 6451.58 inhibitor of DNA binding 1 [Source:ZFIN;Acc:ZDB-GENE-990415-96]
19. ilf2 ENSDARG00000014591 860.66 6451.58 interleukin enhancer binding factor 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2345]
20. mt-co2 ENSDARG00000063908 860.66 6451.58 cytochrome c oxidase II, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-15]
21. rpl14 ENSDARG00000103433 860.66 6451.58 ribosomal protein L14 [Source:ZFIN;Acc:ZDB-GENE-030131-2085]
22. rpl36a ENSDARG00000058105, ENSDARG00000112656 860.66 6451.58 ribosomal protein L36A [Source:ZFIN;Acc:ZDB-GENE-020423-1]
23. rpl9 ENSDARG00000037350, ENSDARG00000112384 860.66 6451.58 ribosomal protein L9 [Source:ZFIN;Acc:ZDB-GENE-030131-8646]
24. rps2 ENSDARG00000077291 860.66 6451.58 ribosomal protein S2 [Source:ZFIN;Acc:ZDB-GENE-040426-2454]
25. tmsb4x ENSDARG00000077777 860.66 6451.58 thymosin beta 4 X-linked [Source:ZFIN;Acc:ZDB-GENE-030131-8304]
26. ACVR2B 573.77 4301.03 activin A receptor, type IIB
27. CABZ01076275.1 ENSDARG00000100753 573.77 4301.03 scavenger receptor class B, member 2b [Source:NCBI gene;Acc:564077]
28. CCDC106 CCDC106 573.77 4301.03
29. PARL 573.77 4301.03 presenilin associated rhomboid like
30. USMG5 USMG5 573.77 4301.03
31. actb2 ENSDARG00000037870 573.77 4301.03 actin, beta 2 [Source:ZFIN;Acc:ZDB-GENE-000329-3]
32. cand1 ENSDARG00000017841 573.77 4301.03 cullin-associated and neddylation-dissociated 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2872]
33. chd2 ENSDARG00000060687 573.77 4301.03 chromodomain helicase DNA binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-050419-256]
34. cirbp cirbp 573.77 4301.03
35. clstn1 ENSDARG00000031720 573.77 4301.03 calsyntenin 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1064]
36. eef1a1l1 ENSDARG00000020850 573.77 4301.03 eukaryotic translation elongation factor 1 alpha 1, like 1 [Source:ZFIN;Acc:ZDB-GENE-990415-52]
37. eef2b ENSDARG00000100371, ENSDARG00000109247 573.77 4301.03 eukaryotic translation elongation factor 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5128]
38. eif5a2 ENSDARG00000056186 573.77 4301.03 eukaryotic translation initiation factor 5A2 [Source:ZFIN;Acc:ZDB-GENE-040426-2405]
39. fabp3 ENSDARG00000023290 573.77 4301.03 fatty acid binding protein 3, muscle and heart [Source:ZFIN;Acc:ZDB-GENE-020318-2]
40. ftsjd2 ftsjd2 573.77 4301.03
41. gars ENSDARG00000059070 573.77 4301.03 glycyl-tRNA synthetase [Source:ZFIN;Acc:ZDB-GENE-030131-9174]
42. gch2 ENSDARG00000099101 573.77 4301.03 GTP cyclohydrolase 2 [Source:ZFIN;Acc:ZDB-GENE-001205-3]
43. h2afva ENSDARG00000068820 573.77 4301.03 H2A histone family, member Va [Source:ZFIN;Acc:ZDB-GENE-020717-1]
44. h3f3a 573.77 4301.03 H3 histone, family 3A, transcript variant X1
45. hmgn3 ENSDARG00000036754, ENSDARG00000116728 573.77 4301.03 high mobility group nucleosomal binding domain 3 [Source:ZFIN;Acc:ZDB-GENE-041114-180]
46. hnrnpab hnrnpab 573.77 4301.03
47. kifc1 ENSDARG00000001558 573.77 4301.03 kinesin family member C1 [Source:ZFIN;Acc:ZDB-GENE-000208-21]
48. mccc1 ENSDARG00000102538, ENSDARG00000115996 573.77 4301.03 methylcrotonoyl-CoA carboxylase 1 (alpha) [Source:ZFIN;Acc:ZDB-GENE-050208-450]
49. metap1 ENSDARG00000033440, ENSDARG00000110334 573.77 4301.03 methionyl aminopeptidase 1 [Source:ZFIN;Acc:ZDB-GENE-050626-124]
50. mt-cyb ENSDARG00000063924 573.77 4301.03 cytochrome b, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-17]
51. ndc1 ENSDARG00000021120 573.77 4301.03 NDC1 transmembrane nucleoporin [Source:ZFIN;Acc:ZDB-GENE-030131-7176]
52. nrip1b ENSDARG00000068894 573.77 4301.03 nuclear receptor interacting protein 1b [Source:ZFIN;Acc:ZDB-GENE-030131-4173]
53. pabpc1a ENSDARG00000017219 573.77 4301.03 poly(A) binding protein, cytoplasmic 1a [Source:ZFIN;Acc:ZDB-GENE-030131-3238]
54. pcna ENSDARG00000054155 573.77 4301.03 proliferating cell nuclear antigen [Source:ZFIN;Acc:ZDB-GENE-000210-8]
55. ppm1g ENSDARG00000075559 573.77 4301.03 protein phosphatase, Mg2+/Mn2+ dependent, 1G [Source:ZFIN;Acc:ZDB-GENE-030425-4]
56. puf60b ENSDARG00000001241 573.77 4301.03 poly-U binding splicing factor b [Source:ZFIN;Acc:ZDB-GENE-040625-116]
57. rbm28 ENSDARG00000025332 573.77 4301.03 RNA binding motif protein 28 [Source:ZFIN;Acc:ZDB-GENE-040426-960]
58. rmnd5b ENSDARG00000043359 573.77 4301.03 required for meiotic nuclear division 5 homolog B [Source:ZFIN;Acc:ZDB-GENE-040426-1744]
59. rpl10a ENSDARG00000042905, ENSDARG00000115649 573.77 4301.03 ribosomal protein L10a [Source:ZFIN;Acc:ZDB-GENE-030131-2025]
60. rpl18a ENSDARG00000025073 573.77 4301.03 ribosomal protein L18a [Source:ZFIN;Acc:ZDB-GENE-040426-1071]
61. rpl23a ENSDARG00000006316 573.77 4301.03 ribosomal protein L23a [Source:ZFIN;Acc:ZDB-GENE-030131-7479]
62. rpl6 ENSDARG00000058451 573.77 4301.03 ribosomal protein L6 [Source:ZFIN;Acc:ZDB-GENE-030131-8671]
63. rps26l ENSDARG00000030408 573.77 4301.03 ribosomal protein S26, like [Source:ZFIN;Acc:ZDB-GENE-040426-1706]
64. si:dkeyp-86f7.3 si:dkeyp-86f7.3 573.77 4301.03
65. srsf2a ENSDARG00000057484 573.77 4301.03 serine/arginine-rich splicing factor 2a [Source:ZFIN;Acc:ZDB-GENE-040426-2706]
66. ywhaba ENSDARG00000013078 573.77 4301.03 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide a [Source:ZFIN;Acc:ZDB-GENE-030131-6583]
67. zgc:123194 zgc:123194 573.77 4301.03
68. AL954137.2 ENSDARG00000114408 286.89 2150.55
69. ARHGAP23 ARHGAP23 286.89 2150.55
70. ATP5B 286.89 2150.55 ATP synthase, H+ transporting, mitochondrial F1 complex, beta polypeptide
71. ATXN7 ENSDARG00000074804 286.89 2150.55 ataxin 7 [Source:ZFIN;Acc:ZDB-GENE-110621-1]
72. C7H4orf48 C7H4orf48 286.89 2150.55
73. CABZ01028296.1 CABZ01028296.1 286.89 2150.55
74. CABZ01111496.1 ENSDARG00000003041 286.89 2150.55 E3 ubiquitin-protein ligase pellino homolog 2-like [Source:NCBI gene;Acc:100334245]
75. EIF4G1 EIF4G1 286.89 2150.55
76. FP016176.1 FP016176.1 286.89 2150.55
77. HNRNPA2B1 HNRNPA2B1 286.89 2150.55
78. MAP4_1 MAP4_1 286.89 2150.55
79. MAPRE2 ENSDARG00000099943 286.89 2150.55 microtubule-associated protein, RP/EB family, member 2 [Source:ZFIN;Acc:ZDB-GENE-071004-41]
80. MEX3D MEX3D 286.89 2150.55
81. MRPL51 ENSDARG00000041340, ENSDARG00000113440 286.89 2150.55 mitochondrial ribosomal protein L51 [Source:ZFIN;Acc:ZDB-GENE-050320-40]
82. NRD1 NRD1 286.89 2150.55
83. PHLDB1 PHLDB1 286.89 2150.55
84. PSIP1 PSIP1 286.89 2150.55
85. RNF38 ENSDARG00000062055 286.89 2150.55 ring finger protein 38 [Source:ZFIN;Acc:ZDB-GENE-030131-8693]
86. RPL29 ENSDARG00000077717 286.89 2150.55 ribosomal protein L29 [Source:ZFIN;Acc:ZDB-GENE-040801-167]
87. RPL37A RPL37A 286.89 2150.55
88. SERP1_1 ENSDARG00000076223 286.89 2150.55 stress associated endoplasmic reticulum protein 1 [Source:HGNC Symbol;Acc:HGNC:10759]
89. SRR SRR 286.89 2150.55
90. TANC2 TANC2 286.89 2150.55
91. TBC1D8B ENSDARG00000062192 286.89 2150.55 TBC1 domain family member 8B [Source:HGNC Symbol;Acc:HGNC:24715]
92. TIMM21 ENSDARG00000071594 286.89 2150.55 translocase of inner mitochondrial membrane 21 [Source:HGNC Symbol;Acc:HGNC:25010]
93. ZNF609 ZNF609 286.89 2150.55
94. ZNF70_2 ZNF70_2 286.89 2150.55
95. aclya ENSDARG00000099079 286.89 2150.55 ATP citrate lyase a [Source:ZFIN;Acc:ZDB-GENE-031113-1]
96. actb1 ENSDARG00000037746, ENSDARG00000113649 286.89 2150.55 actin, beta 1 [Source:ZFIN;Acc:ZDB-GENE-000329-1]
97. acvr1b acvr1b 286.89 2150.55
98. ahcy ENSDARG00000005191 286.89 2150.55 adenosylhomocysteinase [Source:ZFIN;Acc:ZDB-GENE-031219-6]
99. aldoaa ENSDARG00000011665 286.89 2150.55 aldolase a, fructose-bisphosphate, a [Source:ZFIN;Acc:ZDB-GENE-030131-8369]
100. anapc10 ENSDARG00000090152 286.89 2150.55 anaphase promoting complex subunit 10 [Source:ZFIN;Acc:ZDB-GENE-060224-2]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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