Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Zebrafish_28hpf_whole3_PA, section s43.

Sample reads: 133,406. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. AC024175.4 AC024175.4 15168.79 113704.08
2. krt4 ENSDARG00000017624, ENSDARG00000115790 4385.79 32875.54 keratin 4 [Source:ZFIN;Acc:ZDB-GENE-000607-83]
3. apobb apobb 1496.00 11213.90
4. apoc1l apoc1l 1439.70 10791.88
5. apoa1b ENSDARG00000101324 1427.57 10700.96 apolipoprotein A-Ib [Source:ZFIN;Acc:ZDB-GENE-050302-172]
6. zgc:161979_1 zgc:161979_1 1358.27 10181.49
7. tmsb4x ENSDARG00000077777 1225.73 9187.98 thymosin beta 4 X-linked [Source:ZFIN;Acc:ZDB-GENE-030131-8304]
8. apoeb ENSDARG00000040295 1196.28 8967.22 apolipoprotein Eb [Source:ZFIN;Acc:ZDB-GENE-980526-368]
9. apoa2 ENSDARG00000015866 1170.30 8772.48 apolipoprotein A-II [Source:ZFIN;Acc:ZDB-GENE-030131-1046]
10. tpma ENSDARG00000033683 1157.30 8675.03 alpha-tropomyosin [Source:ZFIN;Acc:ZDB-GENE-990415-269]
11. mt-nd4 ENSDARG00000063917 1131.31 8480.21 NADH dehydrogenase 4, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-10]
12. actb2 ENSDARG00000037870 1096.66 8220.48 actin, beta 2 [Source:ZFIN;Acc:ZDB-GENE-000329-3]
13. mt-nd2 ENSDARG00000063899 1049.89 7869.89 NADH dehydrogenase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-8]
14. apoa1a ENSDARG00000012076, ENSDARG00000110395 936.41 7019.26 apolipoprotein A-Ia [Source:ZFIN;Acc:ZDB-GENE-990415-14]
15. zgc:161979 zgc:161979 929.48 6967.31
16. ckma ENSDARG00000035327, ENSDARG00000114671 876.64 6571.23 creatine kinase, muscle a [Source:ZFIN;Acc:ZDB-GENE-980526-109]
17. mt-co2 ENSDARG00000063908 871.44 6532.25 cytochrome c oxidase II, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-15]
18. he1a 822.07 6162.17 hatching enzyme 1a, transcript variant X1
19. mt-co3 ENSDARG00000063912 822.07 6162.17 cytochrome c oxidase III, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-16]
20. si:dkey-151g10.6 si:dkey-151g10.6 692.13 5188.15
21. ckmb ENSDARG00000040565 685.20 5136.21 creatine kinase, muscle b [Source:ZFIN;Acc:ZDB-GENE-040426-2128]
22. eef1a1l1 ENSDARG00000020850 602.91 4519.37 eukaryotic translation elongation factor 1 alpha 1, like 1 [Source:ZFIN;Acc:ZDB-GENE-990415-52]
23. ctslb ENSDARG00000039173, ENSDARG00000074306 600.31 4499.88 cathepsin Lb [Source:ZFIN;Acc:ZDB-GENE-980526-285]
24. mt-atp6 ENSDARG00000063911 596.84 4473.87 ATP synthase 6, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-18]
25. zgc:153129 zgc:153129 595.11 4460.90
26. atp2a1 ENSDARG00000020574 588.18 4408.95 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 1 [Source:ZFIN;Acc:ZDB-GENE-020905-1]
27. actc1b ENSDARG00000099197 572.59 4292.09 actin, alpha, cardiac muscle 1b [Source:ZFIN;Acc:ZDB-GENE-000322-1]
28. fabp2 ENSDARG00000006427, ENSDARG00000110230 511.08 3831.02 fatty acid binding protein 2, intestinal [Source:ZFIN;Acc:ZDB-GENE-991019-5]
29. bhmt ENSDARG00000013430 487.70 3655.76 betaine-homocysteine methyltransferase [Source:ZFIN;Acc:ZDB-GENE-030131-947]
30. zgc:174855 ENSDARG00000094559 469.50 3519.34 zgc:174855 [Source:ZFIN;Acc:ZDB-GENE-071004-74]
31. zgc:112425 zgc:112425 459.98 3447.97
32. wu:fa26c03 449.58 3370.02 wu:fa26c03
33. ppiaa ENSDARG00000009212 427.06 3201.21 peptidylprolyl isomerase Aa (cyclophilin A) [Source:ZFIN;Acc:ZDB-GENE-030131-8556]
34. actb1 ENSDARG00000037746, ENSDARG00000113649 423.59 3175.20 actin, beta 1 [Source:ZFIN;Acc:ZDB-GENE-000329-1]
35. mt-cyb ENSDARG00000063924 420.99 3155.71 cytochrome b, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-17]
36. CABZ01044814.2 CABZ01044814.2 413.20 3097.32
37. pvalb2 ENSDARG00000002768, ENSDARG00000114085 411.47 3084.35 parvalbumin 2 [Source:ZFIN;Acc:ZDB-GENE-000322-4]
38. hspa8 ENSDARG00000068992, ENSDARG00000114726 403.67 3025.88 heat shock protein 8 [Source:ZFIN;Acc:ZDB-GENE-990415-92]
39. mt-nd1 ENSDARG00000063895 398.47 2986.90 NADH dehydrogenase 1, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-7]
40. apoa4 apoa4 388.08 2909.02
41. mylz3 ENSDARG00000017441 388.08 2909.02 myosin, light polypeptide 3, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-000322-6]
42. wu:fb37b09 wu:fb37b09 383.75 2876.56
43. eef2b ENSDARG00000100371, ENSDARG00000109247 382.01 2863.52 eukaryotic translation elongation factor 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5128]
44. hmga1a ENSDARG00000028335 356.89 2675.22 high mobility group AT-hook 1a [Source:ZFIN;Acc:ZDB-GENE-010502-1]
45. ctsla ENSDARG00000007836 353.43 2649.28 cathepsin La [Source:ZFIN;Acc:ZDB-GENE-030131-106]
46. pabpc1a ENSDARG00000017219 332.64 2493.44 poly(A) binding protein, cytoplasmic 1a [Source:ZFIN;Acc:ZDB-GENE-030131-3238]
47. tnnc2 ENSDARG00000070835, ENSDARG00000111155 326.57 2447.94 troponin C type 2 (fast) [Source:ZFIN;Acc:ZDB-GENE-000322-2]
48. rpl10a ENSDARG00000042905, ENSDARG00000115649 323.98 2428.53 ribosomal protein L10a [Source:ZFIN;Acc:ZDB-GENE-030131-2025]
49. mylpfa ENSDARG00000053254, ENSDARG00000112448, ENSDARG00000113256 311.85 2337.60 myosin light chain, phosphorylatable, fast skeletal muscle a [Source:ZFIN;Acc:ZDB-GENE-990712-15]
50. krt8 ENSDARG00000058358, ENSDARG00000109279 309.25 2318.11 keratin 8 [Source:ZFIN;Acc:ZDB-GENE-030411-5]
51. si:dkey-150i13.2 ENSDARG00000071052 297.99 2233.71 si:dkey-150i13.2 [Source:ZFIN;Acc:ZDB-GENE-090312-157]
52. rpl18a ENSDARG00000025073 281.53 2110.33 ribosomal protein L18a [Source:ZFIN;Acc:ZDB-GENE-040426-1071]
53. btf3 ENSDARG00000035400, ENSDARG00000116462 280.66 2103.81 basic transcription factor 3 [Source:ZFIN;Acc:ZDB-GENE-030131-8731]
54. si:dkey-239j18.3 ENSDARG00000089806 275.47 2064.90 si:dkey-239j18.3 [Source:ZFIN;Acc:ZDB-GENE-121214-39]
55. rpl8 ENSDARG00000014867 271.13 2032.37 ribosomal protein L8 [Source:ZFIN;Acc:ZDB-GENE-040426-1670]
56. rpl23 ENSDARG00000053457 264.20 1980.42 ribosomal protein L23 [Source:ZFIN;Acc:ZDB-GENE-030131-8756]
57. rpl26 ENSDARG00000102317 261.61 1961.01 ribosomal protein L26 [Source:ZFIN;Acc:ZDB-GENE-040426-2117]
58. zgc:174153 ENSDARG00000079376 249.48 1870.08 zgc:174153 [Source:ZFIN;Acc:ZDB-GENE-080215-7]
59. aldob ENSDARG00000053684 243.41 1824.58 aldolase b, fructose-bisphosphate [Source:ZFIN;Acc:ZDB-GENE-030131-383]
60. rpl21 ENSDARG00000010516, ENSDARG00000110263 228.69 1714.24 ribosomal protein L21 [Source:ZFIN;Acc:ZDB-GENE-030131-8512]
61. zgc:66286 zgc:66286 227.82 1707.72
62. rpl9 ENSDARG00000037350, ENSDARG00000112384 221.76 1662.30 ribosomal protein L9 [Source:ZFIN;Acc:ZDB-GENE-030131-8646]
63. ptmab ENSDARG00000101766 216.56 1623.32 prothymosin alpha b [Source:ZFIN;Acc:ZDB-GENE-030131-8681]
64. rpl19 ENSDARG00000013307 215.69 1616.80 ribosomal protein L19 [Source:ZFIN;Acc:ZDB-GENE-040426-2290]
65. sepp1a 213.10 1597.38 selenoprotein P, plasma, 1a
66. eif5a ENSDARG00000017235 211.36 1584.34 eukaryotic translation initiation factor 5A [Source:ZFIN;Acc:ZDB-GENE-040426-2229]
67. rps23 ENSDARG00000021838 207.03 1551.88 ribosomal protein S23 [Source:ZFIN;Acc:ZDB-GENE-080220-50]
68. gamt ENSDARG00000070844, ENSDARG00000109945 205.30 1538.91 guanidinoacetate N-methyltransferase [Source:ZFIN;Acc:ZDB-GENE-051030-97]
69. rpl36a ENSDARG00000058105, ENSDARG00000112656 202.70 1519.42 ribosomal protein L36A [Source:ZFIN;Acc:ZDB-GENE-020423-1]
70. rps26l ENSDARG00000030408 202.70 1519.42 ribosomal protein S26, like [Source:ZFIN;Acc:ZDB-GENE-040426-1706]
71. rps14 ENSDARG00000036629 201.83 1512.90 ribosomal protein S14 [Source:ZFIN;Acc:ZDB-GENE-030131-8631]
72. si:dkey-269i1.3 201.83 1512.90 si:dkey-269i1.3
73. APOB APOB 199.24 1493.49
74. rpl36 ENSDARG00000100588 198.37 1486.97 ribosomal protein L36 [Source:ZFIN;Acc:ZDB-GENE-040622-2]
75. pla2g12b ENSDARG00000015662 189.71 1422.05 phospholipase A2, group XIIB [Source:ZFIN;Acc:ZDB-GENE-040426-2771]
76. si:dkey-26g8.5 ENSDARG00000089750 189.71 1422.05 si:dkey-26g8.5 [Source:ZFIN;Acc:ZDB-GENE-121214-19]
77. pvalb9 ENSDARG00000071601, ENSDARG00000113946 187.11 1402.56 parvalbumin 9 [Source:ZFIN;Acc:ZDB-GENE-030805-4]
78. rps27a ENSDARG00000032725, ENSDARG00000114059 186.24 1396.04 ribosomal protein S27a [Source:ZFIN;Acc:ZDB-GENE-030131-10018]
79. gatm ENSDARG00000036239 185.38 1389.59 glycine amidinotransferase (L-arginine:glycine amidinotransferase) [Source:ZFIN;Acc:ZDB-GENE-021015-1]
80. rpl11 ENSDARG00000043509 182.78 1370.10 ribosomal protein L11 [Source:ZFIN;Acc:ZDB-GENE-040625-147]
81. cfl1l ENSDARG00000012972 179.31 1344.09 cofilin 1 (non-muscle), like [Source:ZFIN;Acc:ZDB-GENE-040426-2770]
82. paics ENSDARG00000033539 178.45 1337.65 phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoimidazole succinocarboxamide synthetase [Source:ZFIN;Acc:ZDB-GENE-030131-9762]
83. rbp4 ENSDARG00000101199 178.45 1337.65 retinol binding protein 4, plasma [Source:ZFIN;Acc:ZDB-GENE-000210-19]
84. atp6v1g1 ENSDARG00000022315, ENSDARG00000110951 177.58 1331.13 ATPase H+ transporting V1 subunit G1 [Source:ZFIN;Acc:ZDB-GENE-030131-6965]
85. myl1 ENSDARG00000014196 176.71 1324.60 myosin, light chain 1, alkali; skeletal, fast [Source:ZFIN;Acc:ZDB-GENE-030131-8109]
86. npc2 ENSDARG00000090912 173.25 1298.67 Niemann-Pick disease, type C2 [Source:ZFIN;Acc:ZDB-GENE-021206-13]
87. he1b 170.65 1279.18 hatching enzyme 1b
88. myhz1.3 ENSDARG00000067997 170.65 1279.18 myosin, heavy polypeptide 1.3, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-070705-74]
89. fabp3 ENSDARG00000023290 169.78 1272.66 fatty acid binding protein 3, muscle and heart [Source:ZFIN;Acc:ZDB-GENE-020318-2]
90. rps27.1 ENSDARG00000023298 169.78 1272.66 ribosomal protein S27, isoform 1 [Source:ZFIN;Acc:ZDB-GENE-050522-549]
91. apoc2 ENSDARG00000092155 165.45 1240.20 apolipoprotein C-II [Source:ZFIN;Acc:ZDB-GENE-030131-2168]
92. si:ch211-226o13.2 165.45 1240.20 si:ch211-226o13.2
93. acta1a ENSDARG00000036371 164.59 1233.75 actin, alpha 1a, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-050417-267]
94. slc43a2b ENSDARG00000061120, ENSDARG00000117188 163.72 1227.23 solute carrier family 43 (amino acid system L transporter), member 2b [Source:ZFIN;Acc:ZDB-GENE-041212-6]
95. tfa ENSDARG00000016771 163.72 1227.23 transferrin-a [Source:ZFIN;Acc:ZDB-GENE-980526-35]
96. prps1a ENSDARG00000015524 162.85 1220.71 phosphoribosyl pyrophosphate synthetase 1A [Source:ZFIN;Acc:ZDB-GENE-011212-5]
97. rps6 ENSDARG00000019778 162.85 1220.71 ribosomal protein S6 [Source:ZFIN;Acc:ZDB-GENE-040801-8]
98. tpm3 ENSDARG00000005162 162.85 1220.71 tropomyosin 3 [Source:ZFIN;Acc:ZDB-GENE-030826-16]
99. mt-co1 ENSDARG00000063905 161.99 1214.26 cytochrome c oxidase I, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-14]
100. rps10 ENSDARG00000034897 161.12 1207.74 ribosomal protein S10 [Source:ZFIN;Acc:ZDB-GENE-040426-1481]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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