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Experiment Zebrafish_28hpf_whole3_PA, section s41.

Sample reads: 133,393. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. AC024175.4 AC024175.4 15518.27 116335.34
2. krt4 ENSDARG00000017624, ENSDARG00000115790 4692.15 35175.50 keratin 4 [Source:ZFIN;Acc:ZDB-GENE-000607-83]
3. apoc1l apoc1l 1480.49 11098.74
4. apoeb ENSDARG00000040295 1417.67 10627.80 apolipoprotein Eb [Source:ZFIN;Acc:ZDB-GENE-980526-368]
5. tmsb4x ENSDARG00000077777 1373.58 10297.28 thymosin beta 4 X-linked [Source:ZFIN;Acc:ZDB-GENE-030131-8304]
6. apoa1b ENSDARG00000101324 1368.74 10260.99 apolipoprotein A-Ib [Source:ZFIN;Acc:ZDB-GENE-050302-172]
7. apobb apobb 1360.89 10202.14
8. mt-nd4 ENSDARG00000063917 1276.33 9568.22 NADH dehydrogenase 4, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-10]
9. tpma ENSDARG00000033683 1258.81 9436.88 alpha-tropomyosin [Source:ZFIN;Acc:ZDB-GENE-990415-269]
10. mt-nd2 ENSDARG00000063899 1232.84 9242.19 NADH dehydrogenase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-8]
11. zgc:161979_1 zgc:161979_1 1178.47 8834.60
12. apoa2 ENSDARG00000015866 1043.17 7820.30 apolipoprotein A-II [Source:ZFIN;Acc:ZDB-GENE-030131-1046]
13. apoa1a ENSDARG00000012076, ENSDARG00000110395 924.17 6928.20 apolipoprotein A-Ia [Source:ZFIN;Acc:ZDB-GENE-990415-14]
14. zgc:161979 zgc:161979 902.43 6765.22
15. actb2 ENSDARG00000037870 892.76 6692.73 actin, beta 2 [Source:ZFIN;Acc:ZDB-GENE-000329-3]
16. ckma ENSDARG00000035327, ENSDARG00000114671 869.81 6520.68 creatine kinase, muscle a [Source:ZFIN;Acc:ZDB-GENE-980526-109]
17. mt-co2 ENSDARG00000063908 832.36 6239.93 cytochrome c oxidase II, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-15]
18. mt-co3 ENSDARG00000063912 823.30 6172.01 cytochrome c oxidase III, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-16]
19. ckmb ENSDARG00000040565 761.69 5710.14 creatine kinase, muscle b [Source:ZFIN;Acc:ZDB-GENE-040426-2128]
20. actc1b ENSDARG00000099197 712.76 5343.33 actin, alpha, cardiac muscle 1b [Source:ZFIN;Acc:ZDB-GENE-000322-1]
21. atp2a1 ENSDARG00000020574 650.55 4876.96 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 1 [Source:ZFIN;Acc:ZDB-GENE-020905-1]
22. eef1a1l1 ENSDARG00000020850 642.69 4818.03 eukaryotic translation elongation factor 1 alpha 1, like 1 [Source:ZFIN;Acc:ZDB-GENE-990415-52]
23. mt-atp6 ENSDARG00000063911 628.80 4713.91 ATP synthase 6, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-18]
24. si:dkey-151g10.6 si:dkey-151g10.6 616.72 4623.35
25. fabp2 ENSDARG00000006427, ENSDARG00000110230 564.17 4229.40 fatty acid binding protein 2, intestinal [Source:ZFIN;Acc:ZDB-GENE-991019-5]
26. bhmt ENSDARG00000013430 530.95 3980.36 betaine-homocysteine methyltransferase [Source:ZFIN;Acc:ZDB-GENE-030131-947]
27. mylz3 ENSDARG00000017441 507.99 3808.23 myosin, light polypeptide 3, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-000322-6]
28. zgc:153129 zgc:153129 497.73 3731.32
29. actb1 ENSDARG00000037746, ENSDARG00000113649 495.91 3717.67 actin, beta 1 [Source:ZFIN;Acc:ZDB-GENE-000329-1]
30. ppiaa ENSDARG00000009212 480.21 3599.98 peptidylprolyl isomerase Aa (cyclophilin A) [Source:ZFIN;Acc:ZDB-GENE-030131-8556]
31. pvalb2 ENSDARG00000002768, ENSDARG00000114085 462.69 3468.63 parvalbumin 2 [Source:ZFIN;Acc:ZDB-GENE-000322-4]
32. mt-cyb ENSDARG00000063924 430.68 3228.67 cytochrome b, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-17]
33. apoa4 apoa4 426.45 3196.95
34. mt-nd1 ENSDARG00000063895 418.60 3138.11 NADH dehydrogenase 1, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-7]
35. zgc:112425 zgc:112425 414.37 3106.39
36. tnnc2 ENSDARG00000070835, ENSDARG00000111155 401.08 3006.76 troponin C type 2 (fast) [Source:ZFIN;Acc:ZDB-GENE-000322-2]
37. hspa8 ENSDARG00000068992, ENSDARG00000114726 396.85 2975.05 heat shock protein 8 [Source:ZFIN;Acc:ZDB-GENE-990415-92]
38. eef2b ENSDARG00000100371, ENSDARG00000109247 358.19 2685.23 eukaryotic translation elongation factor 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5128]
39. mylpfa ENSDARG00000053254, ENSDARG00000112448, ENSDARG00000113256 356.38 2671.66 myosin light chain, phosphorylatable, fast skeletal muscle a [Source:ZFIN;Acc:ZDB-GENE-990712-15]
40. si:dkey-150i13.2 ENSDARG00000071052 345.51 2590.17 si:dkey-150i13.2 [Source:ZFIN;Acc:ZDB-GENE-090312-157]
41. ctsla ENSDARG00000007836 323.16 2422.62 cathepsin La [Source:ZFIN;Acc:ZDB-GENE-030131-106]
42. hmga1a ENSDARG00000028335 320.74 2404.48 high mobility group AT-hook 1a [Source:ZFIN;Acc:ZDB-GENE-010502-1]
43. rpl10a ENSDARG00000042905, ENSDARG00000115649 306.25 2295.86 ribosomal protein L10a [Source:ZFIN;Acc:ZDB-GENE-030131-2025]
44. rpl23 ENSDARG00000053457 300.21 2250.58 ribosomal protein L23 [Source:ZFIN;Acc:ZDB-GENE-030131-8756]
45. btf3 ENSDARG00000035400, ENSDARG00000116462 295.37 2214.29 basic transcription factor 3 [Source:ZFIN;Acc:ZDB-GENE-030131-8731]
46. myhz1.3 ENSDARG00000067997 289.94 2173.58 myosin, heavy polypeptide 1.3, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-070705-74]
47. aldob ENSDARG00000053684 279.06 2092.02 aldolase b, fructose-bisphosphate [Source:ZFIN;Acc:ZDB-GENE-030131-383]
48. krt8 ENSDARG00000058358, ENSDARG00000109279 276.65 2073.95 keratin 8 [Source:ZFIN;Acc:ZDB-GENE-030411-5]
49. rpl26 ENSDARG00000102317 270.61 2028.67 ribosomal protein L26 [Source:ZFIN;Acc:ZDB-GENE-040426-2117]
50. rpl21 ENSDARG00000010516, ENSDARG00000110263 265.78 1992.46 ribosomal protein L21 [Source:ZFIN;Acc:ZDB-GENE-030131-8512]
51. rpl8 ENSDARG00000014867 260.94 1956.18 ribosomal protein L8 [Source:ZFIN;Acc:ZDB-GENE-040426-1670]
52. rpl9 ENSDARG00000037350, ENSDARG00000112384 256.11 1919.97 ribosomal protein L9 [Source:ZFIN;Acc:ZDB-GENE-030131-8646]
53. pabpc1a ENSDARG00000017219 254.30 1906.40 poly(A) binding protein, cytoplasmic 1a [Source:ZFIN;Acc:ZDB-GENE-030131-3238]
54. rbp4 ENSDARG00000101199 249.47 1870.19 retinol binding protein 4, plasma [Source:ZFIN;Acc:ZDB-GENE-000210-19]
55. acta1b ENSDARG00000055618 247.05 1852.05 actin, alpha 1b, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-030131-55]
56. rps23 ENSDARG00000021838 245.84 1842.98 ribosomal protein S23 [Source:ZFIN;Acc:ZDB-GENE-080220-50]
57. pla2g12b ENSDARG00000015662 236.78 1775.06 phospholipase A2, group XIIB [Source:ZFIN;Acc:ZDB-GENE-040426-2771]
58. myl1 ENSDARG00000014196 234.37 1756.99 myosin, light chain 1, alkali; skeletal, fast [Source:ZFIN;Acc:ZDB-GENE-030131-8109]
59. ptmab ENSDARG00000101766 225.91 1693.57 prothymosin alpha b [Source:ZFIN;Acc:ZDB-GENE-030131-8681]
60. eif5a ENSDARG00000017235 225.31 1689.07 eukaryotic translation initiation factor 5A [Source:ZFIN;Acc:ZDB-GENE-040426-2229]
61. tnnt3a ENSDARG00000030270 213.83 1603.01 troponin T type 3a (skeletal, fast) [Source:ZFIN;Acc:ZDB-GENE-000322-3]
62. zgc:66286 zgc:66286 213.83 1603.01
63. ttna ttna 212.02 1589.44
64. rpl18a ENSDARG00000025073 211.41 1584.87 ribosomal protein L18a [Source:ZFIN;Acc:ZDB-GENE-040426-1071]
65. gamt ENSDARG00000070844, ENSDARG00000109945 207.79 1557.73 guanidinoacetate N-methyltransferase [Source:ZFIN;Acc:ZDB-GENE-051030-97]
66. rpl36a ENSDARG00000058105, ENSDARG00000112656 207.18 1553.16 ribosomal protein L36A [Source:ZFIN;Acc:ZDB-GENE-020423-1]
67. dbi ENSDARG00000026369 201.14 1507.88 diazepam binding inhibitor (GABA receptor modulator, acyl-CoA binding protein) [Source:ZFIN;Acc:ZDB-GENE-040426-1861]
68. rpl19 ENSDARG00000013307 201.14 1507.88 ribosomal protein L19 [Source:ZFIN;Acc:ZDB-GENE-040426-2290]
69. cyt1l ENSDARG00000036832 199.94 1498.88 type I cytokeratin, enveloping layer, like [Source:ZFIN;Acc:ZDB-GENE-061026-4]
70. fetub ENSDARG00000053973 198.73 1489.81 fetuin B [Source:ZFIN;Acc:ZDB-GENE-050208-4]
71. ttnb ttnb 195.71 1467.17
72. rps26l ENSDARG00000030408 195.10 1462.60 ribosomal protein S26, like [Source:ZFIN;Acc:ZDB-GENE-040426-1706]
73. gatm ENSDARG00000036239 192.08 1439.96 glycine amidinotransferase (L-arginine:glycine amidinotransferase) [Source:ZFIN;Acc:ZDB-GENE-021015-1]
74. rps14 ENSDARG00000036629 190.88 1430.96 ribosomal protein S14 [Source:ZFIN;Acc:ZDB-GENE-030131-8631]
75. rpl11 ENSDARG00000043509 190.27 1426.39 ribosomal protein L11 [Source:ZFIN;Acc:ZDB-GENE-040625-147]
76. cfl1l ENSDARG00000012972 189.67 1421.89 cofilin 1 (non-muscle), like [Source:ZFIN;Acc:ZDB-GENE-040426-2770]
77. rpl27 ENSDARG00000015128 188.46 1412.82 ribosomal protein L27 [Source:ZFIN;Acc:ZDB-GENE-030131-4343]
78. mt-co1 ENSDARG00000063905 187.85 1408.25 cytochrome c oxidase I, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-14]
79. sepp1a 186.04 1394.68 selenoprotein P, plasma, 1a
80. slc43a2b ENSDARG00000061120, ENSDARG00000117188 185.44 1390.18 solute carrier family 43 (amino acid system L transporter), member 2b [Source:ZFIN;Acc:ZDB-GENE-041212-6]
81. rpl36 ENSDARG00000100588 183.63 1376.61 ribosomal protein L36 [Source:ZFIN;Acc:ZDB-GENE-040622-2]
82. APOB APOB 181.21 1358.47
83. zgc:92533 zgc:92533 178.19 1335.83
84. si:dkeyp-86f7.3 si:dkeyp-86f7.3 176.98 1326.76
85. acta1a ENSDARG00000036371 175.17 1313.19 actin, alpha 1a, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-050417-267]
86. tfa ENSDARG00000016771 173.36 1299.62 transferrin-a [Source:ZFIN;Acc:ZDB-GENE-980526-35]
87. tpm3 ENSDARG00000005162 171.55 1286.05 tropomyosin 3 [Source:ZFIN;Acc:ZDB-GENE-030826-16]
88. rps2 ENSDARG00000077291 170.94 1281.48 ribosomal protein S2 [Source:ZFIN;Acc:ZDB-GENE-040426-2454]
89. gapdh ENSDARG00000043457 169.13 1267.91 glyceraldehyde-3-phosphate dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-030115-1]
90. rplp0 ENSDARG00000051783 169.13 1267.91 ribosomal protein, large, P0 [Source:ZFIN;Acc:ZDB-GENE-000629-1]
91. si:ch211-226o13.2 167.92 1258.84 si:ch211-226o13.2
92. npc2 ENSDARG00000090912 166.11 1245.27 Niemann-Pick disease, type C2 [Source:ZFIN;Acc:ZDB-GENE-021206-13]
93. rps10 ENSDARG00000034897 164.30 1231.70 ribosomal protein S10 [Source:ZFIN;Acc:ZDB-GENE-040426-1481]
94. rps27a ENSDARG00000032725, ENSDARG00000114059 163.69 1227.13 ribosomal protein S27a [Source:ZFIN;Acc:ZDB-GENE-030131-10018]
95. myl10 ENSDARG00000062592 163.09 1222.63 myosin, light chain 10, regulatory [Source:ZFIN;Acc:ZDB-GENE-050417-421]
96. apoc2 ENSDARG00000092155 162.49 1218.13 apolipoprotein C-II [Source:ZFIN;Acc:ZDB-GENE-030131-2168]
97. col1a1b ENSDARG00000035809 162.49 1218.13 collagen, type I, alpha 1b [Source:ZFIN;Acc:ZDB-GENE-030131-4400]
98. fabp3 ENSDARG00000023290 159.47 1195.49 fatty acid binding protein 3, muscle and heart [Source:ZFIN;Acc:ZDB-GENE-020318-2]
99. rplp1 ENSDARG00000021864 159.47 1195.49 ribosomal protein, large, P1 [Source:ZFIN;Acc:ZDB-GENE-030131-8663]
100. pvalb9 ENSDARG00000071601, ENSDARG00000113946 158.86 1190.92 parvalbumin 9 [Source:ZFIN;Acc:ZDB-GENE-030805-4]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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