Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Experiment Zebrafish_28hpf_whole3_PA, section s39.

Sample reads: 133,387. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. AC024175.4 AC024175.4 19441.36 145753.14
2. krt4 ENSDARG00000017624, ENSDARG00000115790 4646.12 34832.26 keratin 4 [Source:ZFIN;Acc:ZDB-GENE-000607-83]
3. tpma ENSDARG00000033683 1490.57 11174.90 alpha-tropomyosin [Source:ZFIN;Acc:ZDB-GENE-990415-269]
4. apoeb ENSDARG00000040295 1483.71 11123.47 apolipoprotein Eb [Source:ZFIN;Acc:ZDB-GENE-980526-368]
5. zgc:161979_1 zgc:161979_1 1474.57 11054.95
6. apoc1l apoc1l 1469.24 11014.99
7. apoa1b ENSDARG00000101324 1402.98 10518.23 apolipoprotein A-Ib [Source:ZFIN;Acc:ZDB-GENE-050302-172]
8. apoa2 ENSDARG00000015866 1348.14 10107.09 apolipoprotein A-II [Source:ZFIN;Acc:ZDB-GENE-030131-1046]
9. mt-nd4 ENSDARG00000063917 1207.23 9050.68 NADH dehydrogenase 4, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-10]
10. apobb apobb 1128.78 8462.54
11. mt-nd2 ENSDARG00000063899 1080.03 8097.06 NADH dehydrogenase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-8]
12. actb2 ENSDARG00000037870 1039.67 7794.47 actin, beta 2 [Source:ZFIN;Acc:ZDB-GENE-000329-3]
13. ckma ENSDARG00000035327, ENSDARG00000114671 1009.96 7571.74 creatine kinase, muscle a [Source:ZFIN;Acc:ZDB-GENE-980526-109]
14. tmsb4x ENSDARG00000077777 1008.44 7560.34 thymosin beta 4 X-linked [Source:ZFIN;Acc:ZDB-GENE-030131-8304]
15. zgc:161979 zgc:161979 968.83 7263.38
16. actc1b ENSDARG00000099197 846.20 6344.02 actin, alpha, cardiac muscle 1b [Source:ZFIN;Acc:ZDB-GENE-000322-1]
17. apoa1a ENSDARG00000012076, ENSDARG00000110395 801.27 6007.17 apolipoprotein A-Ia [Source:ZFIN;Acc:ZDB-GENE-990415-14]
18. ckmb ENSDARG00000040565 796.70 5972.91 creatine kinase, muscle b [Source:ZFIN;Acc:ZDB-GENE-040426-2128]
19. mt-co3 ENSDARG00000063912 789.08 5915.78 cytochrome c oxidase III, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-16]
20. mt-co2 ENSDARG00000063908 785.27 5887.22 cytochrome c oxidase II, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-15]
21. atp2a1 ENSDARG00000020574 733.48 5498.95 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 1 [Source:ZFIN;Acc:ZDB-GENE-020905-1]
22. si:dkey-151g10.6 si:dkey-151g10.6 712.91 5344.73
23. mt-atp6 ENSDARG00000063911 645.89 4842.28 ATP synthase 6, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-18]
24. eef1a1l1 ENSDARG00000020850 642.84 4819.41 eukaryotic translation elongation factor 1 alpha 1, like 1 [Source:ZFIN;Acc:ZDB-GENE-990415-52]
25. zgc:153129 zgc:153129 563.63 4225.57
26. actb1 ENSDARG00000037746, ENSDARG00000113649 539.25 4042.79 actin, beta 1 [Source:ZFIN;Acc:ZDB-GENE-000329-1]
27. mylz3 ENSDARG00000017441 526.31 3945.78 myosin, light polypeptide 3, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-000322-6]
28. pvalb2 ENSDARG00000002768, ENSDARG00000114085 472.23 3540.34 parvalbumin 2 [Source:ZFIN;Acc:ZDB-GENE-000322-4]
29. ppiaa ENSDARG00000009212 452.43 3391.90 peptidylprolyl isomerase Aa (cyclophilin A) [Source:ZFIN;Acc:ZDB-GENE-030131-8556]
30. mt-nd1 ENSDARG00000063895 448.62 3363.33 NADH dehydrogenase 1, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-7]
31. tnnc2 ENSDARG00000070835, ENSDARG00000111155 445.57 3340.47 troponin C type 2 (fast) [Source:ZFIN;Acc:ZDB-GENE-000322-2]
32. bhmt ENSDARG00000013430 434.91 3260.55 betaine-homocysteine methyltransferase [Source:ZFIN;Acc:ZDB-GENE-030131-947]
33. hspa8 ENSDARG00000068992, ENSDARG00000114726 422.72 3169.16 heat shock protein 8 [Source:ZFIN;Acc:ZDB-GENE-990415-92]
34. fabp2 ENSDARG00000006427, ENSDARG00000110230 407.49 3054.98 fatty acid binding protein 2, intestinal [Source:ZFIN;Acc:ZDB-GENE-991019-5]
35. mt-cyb ENSDARG00000063924 400.63 3003.55 cytochrome b, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-17]
36. eef2b ENSDARG00000100371, ENSDARG00000109247 367.12 2752.32 eukaryotic translation elongation factor 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5128]
37. mylpfa ENSDARG00000053254, ENSDARG00000112448, ENSDARG00000113256 358.74 2689.50 myosin light chain, phosphorylatable, fast skeletal muscle a [Source:ZFIN;Acc:ZDB-GENE-990712-15]
38. zgc:112425 zgc:112425 353.41 2649.54
39. hmga1a ENSDARG00000028335 352.65 2643.84 high mobility group AT-hook 1a [Source:ZFIN;Acc:ZDB-GENE-010502-1]
40. myhz1.3 ENSDARG00000067997 322.94 2421.10 myosin, heavy polypeptide 1.3, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-070705-74]
41. btf3 ENSDARG00000035400, ENSDARG00000116462 320.66 2404.01 basic transcription factor 3 [Source:ZFIN;Acc:ZDB-GENE-030131-8731]
42. ctsla ENSDARG00000007836 320.66 2404.01 cathepsin La [Source:ZFIN;Acc:ZDB-GENE-030131-106]
43. apoa4 apoa4 316.09 2369.75
44. rpl10a ENSDARG00000042905, ENSDARG00000115649 313.80 2352.58 ribosomal protein L10a [Source:ZFIN;Acc:ZDB-GENE-030131-2025]
45. rbp4 ENSDARG00000101199 295.52 2215.53 retinol binding protein 4, plasma [Source:ZFIN;Acc:ZDB-GENE-000210-19]
46. zgc:66286 zgc:66286 278.77 2089.96
47. rpl23 ENSDARG00000053457 271.91 2038.53 ribosomal protein L23 [Source:ZFIN;Acc:ZDB-GENE-030131-8756]
48. acta1b ENSDARG00000055618 271.15 2032.83 actin, alpha 1b, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-030131-55]
49. si:dkey-150i13.2 ENSDARG00000071052 265.06 1987.17 si:dkey-150i13.2 [Source:ZFIN;Acc:ZDB-GENE-090312-157]
50. rpl26 ENSDARG00000102317 259.73 1947.21 ribosomal protein L26 [Source:ZFIN;Acc:ZDB-GENE-040426-2117]
51. rpl21 ENSDARG00000010516, ENSDARG00000110263 249.06 1867.22 ribosomal protein L21 [Source:ZFIN;Acc:ZDB-GENE-030131-8512]
52. cfl1l ENSDARG00000012972 242.21 1815.86 cofilin 1 (non-muscle), like [Source:ZFIN;Acc:ZDB-GENE-040426-2770]
53. acta1a ENSDARG00000036371 240.68 1804.39 actin, alpha 1a, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-050417-267]
54. rpl15 ENSDARG00000009285 239.16 1793.00 ribosomal protein L15 [Source:ZFIN;Acc:ZDB-GENE-040801-183]
55. rpl18a ENSDARG00000025073 239.16 1793.00 ribosomal protein L18a [Source:ZFIN;Acc:ZDB-GENE-040426-1071]
56. rpl9 ENSDARG00000037350, ENSDARG00000112384 237.64 1781.60 ribosomal protein L9 [Source:ZFIN;Acc:ZDB-GENE-030131-8646]
57. rpl8 ENSDARG00000014867 236.88 1775.90 ribosomal protein L8 [Source:ZFIN;Acc:ZDB-GENE-040426-1670]
58. gamt ENSDARG00000070844, ENSDARG00000109945 228.50 1713.08 guanidinoacetate N-methyltransferase [Source:ZFIN;Acc:ZDB-GENE-051030-97]
59. rpl19 ENSDARG00000013307 228.50 1713.08 ribosomal protein L19 [Source:ZFIN;Acc:ZDB-GENE-040426-2290]
60. aldob ENSDARG00000053684 227.74 1707.38 aldolase b, fructose-bisphosphate [Source:ZFIN;Acc:ZDB-GENE-030131-383]
61. myl1 ENSDARG00000014196 226.21 1695.91 myosin, light chain 1, alkali; skeletal, fast [Source:ZFIN;Acc:ZDB-GENE-030131-8109]
62. ttna ttna 225.45 1690.21
63. pabpc1a ENSDARG00000017219 221.64 1661.65 poly(A) binding protein, cytoplasmic 1a [Source:ZFIN;Acc:ZDB-GENE-030131-3238]
64. krt8 ENSDARG00000058358, ENSDARG00000109279 217.07 1627.39 keratin 8 [Source:ZFIN;Acc:ZDB-GENE-030411-5]
65. rps23 ENSDARG00000021838 210.22 1576.03 ribosomal protein S23 [Source:ZFIN;Acc:ZDB-GENE-080220-50]
66. tnnt3a ENSDARG00000030270 208.69 1564.56 troponin T type 3a (skeletal, fast) [Source:ZFIN;Acc:ZDB-GENE-000322-3]
67. cyt1l ENSDARG00000036832 207.93 1558.86 type I cytokeratin, enveloping layer, like [Source:ZFIN;Acc:ZDB-GENE-061026-4]
68. eif5a ENSDARG00000017235 207.93 1558.86 eukaryotic translation initiation factor 5A [Source:ZFIN;Acc:ZDB-GENE-040426-2229]
69. col1a1b ENSDARG00000035809 206.41 1547.47 collagen, type I, alpha 1b [Source:ZFIN;Acc:ZDB-GENE-030131-4400]
70. myl10 ENSDARG00000062592 204.89 1536.07 myosin, light chain 10, regulatory [Source:ZFIN;Acc:ZDB-GENE-050417-421]
71. rps14 ENSDARG00000036629 201.84 1513.21 ribosomal protein S14 [Source:ZFIN;Acc:ZDB-GENE-030131-8631]
72. pla2g12b ENSDARG00000015662 201.08 1507.51 phospholipase A2, group XIIB [Source:ZFIN;Acc:ZDB-GENE-040426-2771]
73. rpl11 ENSDARG00000043509 200.32 1501.81 ribosomal protein L11 [Source:ZFIN;Acc:ZDB-GENE-040625-147]
74. rps26l ENSDARG00000030408 197.27 1478.95 ribosomal protein S26, like [Source:ZFIN;Acc:ZDB-GENE-040426-1706]
75. ttnb ttnb 195.75 1467.55
76. aldoab ENSDARG00000034470 194.22 1456.08 aldolase a, fructose-bisphosphate, b [Source:ZFIN;Acc:ZDB-GENE-040426-2299]
77. tpm3 ENSDARG00000005162 193.46 1450.38 tropomyosin 3 [Source:ZFIN;Acc:ZDB-GENE-030826-16]
78. rpl36a ENSDARG00000058105, ENSDARG00000112656 191.18 1433.29 ribosomal protein L36A [Source:ZFIN;Acc:ZDB-GENE-020423-1]
79. atp6v1g1 ENSDARG00000022315, ENSDARG00000110951 185.84 1393.25 ATPase H+ transporting V1 subunit G1 [Source:ZFIN;Acc:ZDB-GENE-030131-6965]
80. APOB APOB 183.56 1376.16
81. ptmab ENSDARG00000101766 182.80 1370.46 prothymosin alpha b [Source:ZFIN;Acc:ZDB-GENE-030131-8681]
82. rpl27 ENSDARG00000015128 176.71 1324.81 ribosomal protein L27 [Source:ZFIN;Acc:ZDB-GENE-030131-4343]
83. rps2 ENSDARG00000077291 175.94 1319.03 ribosomal protein S2 [Source:ZFIN;Acc:ZDB-GENE-040426-2454]
84. dbi ENSDARG00000026369 172.90 1296.24 diazepam binding inhibitor (GABA receptor modulator, acyl-CoA binding protein) [Source:ZFIN;Acc:ZDB-GENE-040426-1861]
85. rps10 ENSDARG00000034897 169.85 1273.38 ribosomal protein S10 [Source:ZFIN;Acc:ZDB-GENE-040426-1481]
86. tnni2b.1 ENSDARG00000035958 169.85 1273.38 troponin I type 2b (skeletal, fast), tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-050417-49]
87. rps27a ENSDARG00000032725, ENSDARG00000114059 168.33 1261.98 ribosomal protein S27a [Source:ZFIN;Acc:ZDB-GENE-030131-10018]
88. sepp1a 168.33 1261.98 selenoprotein P, plasma, 1a
89. tfa ENSDARG00000016771 168.33 1261.98 transferrin-a [Source:ZFIN;Acc:ZDB-GENE-980526-35]
90. mt-co1 ENSDARG00000063905 167.57 1256.28 cytochrome c oxidase I, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-14]
91. pvalb9 ENSDARG00000071601, ENSDARG00000113946 166.04 1244.81 parvalbumin 9 [Source:ZFIN;Acc:ZDB-GENE-030805-4]
92. rplp0 ENSDARG00000051783 163.76 1227.72 ribosomal protein, large, P0 [Source:ZFIN;Acc:ZDB-GENE-000629-1]
93. fabp3 ENSDARG00000023290 159.95 1199.16 fatty acid binding protein 3, muscle and heart [Source:ZFIN;Acc:ZDB-GENE-020318-2]
94. ATP5B 159.19 1193.46 ATP synthase, H+ transporting, mitochondrial F1 complex, beta polypeptide
95. rpl36 ENSDARG00000100588 157.66 1181.99 ribosomal protein L36 [Source:ZFIN;Acc:ZDB-GENE-040622-2]
96. rps12 ENSDARG00000036875, ENSDARG00000115157 156.90 1176.29 ribosomal protein S12 [Source:ZFIN;Acc:ZDB-GENE-030131-8951]
97. zgc:92533 zgc:92533 156.90 1176.29
98. rps27.1 ENSDARG00000023298 156.14 1170.59 ribosomal protein S27, isoform 1 [Source:ZFIN;Acc:ZDB-GENE-050522-549]
99. si:dkeyp-86f7.3 si:dkeyp-86f7.3 151.57 1136.33
100. si:ch211-226o13.2 150.05 1124.93 si:ch211-226o13.2
First Previous 1 2 3 Next Last
Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA