Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Zebrafish_28hpf_whole3_PA, section s30.

Sample reads: 133,425. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. AC024175.4 AC024175.4 16963.67 127140.14
2. krt4 ENSDARG00000017624, ENSDARG00000115790 3078.27 23071.17 keratin 4 [Source:ZFIN;Acc:ZDB-GENE-000607-83]
3. tpma ENSDARG00000033683 1804.39 13523.63 alpha-tropomyosin [Source:ZFIN;Acc:ZDB-GENE-990415-269]
4. mt-nd2 ENSDARG00000063899 1579.27 11836.39 NADH dehydrogenase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-8]
5. mt-nd4 ENSDARG00000063917 1303.56 9769.98 NADH dehydrogenase 4, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-10]
6. ckmb ENSDARG00000040565 1198.85 8985.20 creatine kinase, muscle b [Source:ZFIN;Acc:ZDB-GENE-040426-2128]
7. mt-co2 ENSDARG00000063908 1169.19 8762.90 cytochrome c oxidase II, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-15]
8. ckma ENSDARG00000035327, ENSDARG00000114671 1163.95 8723.63 creatine kinase, muscle a [Source:ZFIN;Acc:ZDB-GENE-980526-109]
9. actc1b ENSDARG00000099197 1123.81 8422.79 actin, alpha, cardiac muscle 1b [Source:ZFIN;Acc:ZDB-GENE-000322-1]
10. mt-atp6 ENSDARG00000063911 1109.85 8318.16 ATP synthase 6, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-18]
11. mt-co3 ENSDARG00000063912 1043.54 7821.17 cytochrome c oxidase III, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-16]
12. atp2a1 ENSDARG00000020574 956.29 7167.25 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 1 [Source:ZFIN;Acc:ZDB-GENE-020905-1]
13. si:dkey-151g10.6 si:dkey-151g10.6 917.90 6879.52
14. actb2 ENSDARG00000037870 856.82 6421.74 actin, beta 2 [Source:ZFIN;Acc:ZDB-GENE-000329-3]
15. eef1a1l1 ENSDARG00000020850 832.39 6238.64 eukaryotic translation elongation factor 1 alpha 1, like 1 [Source:ZFIN;Acc:ZDB-GENE-990415-52]
16. tmsb4x ENSDARG00000077777 725.94 5440.81 thymosin beta 4 X-linked [Source:ZFIN;Acc:ZDB-GENE-030131-8304]
17. mylz3 ENSDARG00000017441 724.20 5427.77 myosin, light polypeptide 3, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-000322-6]
18. zgc:161979_1 zgc:161979_1 650.91 4878.47
19. mt-nd1 ENSDARG00000063895 596.81 4473.00 NADH dehydrogenase 1, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-7]
20. apoa1b ENSDARG00000101324 595.06 4459.88 apolipoprotein A-Ib [Source:ZFIN;Acc:ZDB-GENE-050302-172]
21. hspa8 ENSDARG00000068992, ENSDARG00000114726 575.87 4316.06 heat shock protein 8 [Source:ZFIN;Acc:ZDB-GENE-990415-92]
22. apoc1l apoc1l 547.95 4106.80
23. tnnc2 ENSDARG00000070835, ENSDARG00000111155 535.73 4015.22 troponin C type 2 (fast) [Source:ZFIN;Acc:ZDB-GENE-000322-2]
24. apoeb ENSDARG00000040295 516.54 3871.39 apolipoprotein Eb [Source:ZFIN;Acc:ZDB-GENE-980526-368]
25. ppiaa ENSDARG00000009212 506.07 3792.92 peptidylprolyl isomerase Aa (cyclophilin A) [Source:ZFIN;Acc:ZDB-GENE-030131-8556]
26. zgc:66286 zgc:66286 504.32 3779.80
27. eef2b ENSDARG00000100371, ENSDARG00000109247 493.85 3701.33 eukaryotic translation elongation factor 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5128]
28. zgc:112425 zgc:112425 483.38 3622.86
29. hmga1a ENSDARG00000028335 455.46 3413.60 high mobility group AT-hook 1a [Source:ZFIN;Acc:ZDB-GENE-010502-1]
30. rpl18a ENSDARG00000025073 453.71 3400.49 ribosomal protein L18a [Source:ZFIN;Acc:ZDB-GENE-040426-1071]
31. rpl10a ENSDARG00000042905, ENSDARG00000115649 451.97 3387.45 ribosomal protein L10a [Source:ZFIN;Acc:ZDB-GENE-030131-2025]
32. apoa2 ENSDARG00000015866 441.50 3308.98 apolipoprotein A-II [Source:ZFIN;Acc:ZDB-GENE-030131-1046]
33. zgc:161979 zgc:161979 436.26 3269.70
34. apobb apobb 434.52 3256.66
35. actb1 ENSDARG00000037746, ENSDARG00000113649 431.03 3230.50 actin, beta 1 [Source:ZFIN;Acc:ZDB-GENE-000329-1]
36. btf3 ENSDARG00000035400, ENSDARG00000116462 425.79 3191.23 basic transcription factor 3 [Source:ZFIN;Acc:ZDB-GENE-030131-8731]
37. mylpfa ENSDARG00000053254, ENSDARG00000112448, ENSDARG00000113256 418.81 3138.92 myosin light chain, phosphorylatable, fast skeletal muscle a [Source:ZFIN;Acc:ZDB-GENE-990712-15]
38. mt-cyb ENSDARG00000063924 415.32 3112.76 cytochrome b, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-17]
39. myhz1.3 ENSDARG00000067997 410.09 3073.56 myosin, heavy polypeptide 1.3, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-070705-74]
40. rpl8 ENSDARG00000014867 408.34 3060.45 ribosomal protein L8 [Source:ZFIN;Acc:ZDB-GENE-040426-1670]
41. acta1a ENSDARG00000036371 389.15 2916.62 actin, alpha 1a, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-050417-267]
42. rpl23 ENSDARG00000053457 389.15 2916.62 ribosomal protein L23 [Source:ZFIN;Acc:ZDB-GENE-030131-8756]
43. zgc:153129 zgc:153129 387.40 2903.50
44. fabp3 ENSDARG00000023290 366.46 2746.56 fatty acid binding protein 3, muscle and heart [Source:ZFIN;Acc:ZDB-GENE-020318-2]
45. acta1b ENSDARG00000055618 362.97 2720.41 actin, alpha 1b, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-030131-55]
46. rps23 ENSDARG00000021838 361.23 2707.36 ribosomal protein S23 [Source:ZFIN;Acc:ZDB-GENE-080220-50]
47. rpl26 ENSDARG00000102317 354.25 2655.05 ribosomal protein L26 [Source:ZFIN;Acc:ZDB-GENE-040426-2117]
48. myl10 ENSDARG00000062592 349.01 2615.78 myosin, light chain 10, regulatory [Source:ZFIN;Acc:ZDB-GENE-050417-421]
49. apoa1a ENSDARG00000012076, ENSDARG00000110395 338.54 2537.31 apolipoprotein A-Ia [Source:ZFIN;Acc:ZDB-GENE-990415-14]
50. pvalb2 ENSDARG00000002768, ENSDARG00000114085 321.09 2406.52 parvalbumin 2 [Source:ZFIN;Acc:ZDB-GENE-000322-4]
51. rps26l ENSDARG00000030408 314.11 2354.21 ribosomal protein S26, like [Source:ZFIN;Acc:ZDB-GENE-040426-1706]
52. ttna ttna 312.36 2341.09
53. rpl36a ENSDARG00000058105, ENSDARG00000112656 307.13 2301.89 ribosomal protein L36A [Source:ZFIN;Acc:ZDB-GENE-020423-1]
54. hsp90aa1.1 ENSDARG00000010478 303.64 2275.74 heat shock protein 90, alpha (cytosolic), class A member 1, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-990415-94]
55. rpl9 ENSDARG00000037350, ENSDARG00000112384 301.89 2262.62 ribosomal protein L9 [Source:ZFIN;Acc:ZDB-GENE-030131-8646]
56. eif5a ENSDARG00000017235 294.91 2210.31 eukaryotic translation initiation factor 5A [Source:ZFIN;Acc:ZDB-GENE-040426-2229]
57. rpl11 ENSDARG00000043509 287.93 2157.99 ribosomal protein L11 [Source:ZFIN;Acc:ZDB-GENE-040625-147]
58. rps14 ENSDARG00000036629 286.19 2144.95 ribosomal protein S14 [Source:ZFIN;Acc:ZDB-GENE-030131-8631]
59. tnnt3a ENSDARG00000030270 286.19 2144.95 troponin T type 3a (skeletal, fast) [Source:ZFIN;Acc:ZDB-GENE-000322-3]
60. rpl19 ENSDARG00000013307 277.46 2079.52 ribosomal protein L19 [Source:ZFIN;Acc:ZDB-GENE-040426-2290]
61. pabpc1a ENSDARG00000017219 273.97 2053.36 poly(A) binding protein, cytoplasmic 1a [Source:ZFIN;Acc:ZDB-GENE-030131-3238]
62. myl1 ENSDARG00000014196 265.25 1988.01 myosin, light chain 1, alkali; skeletal, fast [Source:ZFIN;Acc:ZDB-GENE-030131-8109]
63. rps27a ENSDARG00000032725, ENSDARG00000114059 263.50 1974.89 ribosomal protein S27a [Source:ZFIN;Acc:ZDB-GENE-030131-10018]
64. rpl5b ENSDARG00000015862, ENSDARG00000109661 261.76 1961.85 ribosomal protein L5b [Source:ZFIN;Acc:ZDB-GENE-040625-93]
65. rpl21 ENSDARG00000010516, ENSDARG00000110263 258.27 1935.69 ribosomal protein L21 [Source:ZFIN;Acc:ZDB-GENE-030131-8512]
66. rpl36 ENSDARG00000100588 246.05 1844.11 ribosomal protein L36 [Source:ZFIN;Acc:ZDB-GENE-040622-2]
67. tnni2b.1 ENSDARG00000035958 242.56 1817.95 troponin I type 2b (skeletal, fast), tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-050417-49]
68. tpm3 ENSDARG00000005162 242.56 1817.95 tropomyosin 3 [Source:ZFIN;Acc:ZDB-GENE-030826-16]
69. rpl15 ENSDARG00000009285 240.82 1804.91 ribosomal protein L15 [Source:ZFIN;Acc:ZDB-GENE-040801-183]
70. rplp1 ENSDARG00000021864 235.58 1765.64 ribosomal protein, large, P1 [Source:ZFIN;Acc:ZDB-GENE-030131-8663]
71. rps6 ENSDARG00000019778 235.58 1765.64 ribosomal protein S6 [Source:ZFIN;Acc:ZDB-GENE-040801-8]
72. ptmab ENSDARG00000101766 230.35 1726.44 prothymosin alpha b [Source:ZFIN;Acc:ZDB-GENE-030131-8681]
73. id1 ENSDARG00000040764 228.60 1713.32 inhibitor of DNA binding 1 [Source:ZFIN;Acc:ZDB-GENE-990415-96]
74. rps2 ENSDARG00000077291 228.60 1713.32 ribosomal protein S2 [Source:ZFIN;Acc:ZDB-GENE-040426-2454]
75. rps10 ENSDARG00000034897 225.11 1687.17 ribosomal protein S10 [Source:ZFIN;Acc:ZDB-GENE-040426-1481]
76. rpl27 ENSDARG00000015128 223.37 1674.12 ribosomal protein L27 [Source:ZFIN;Acc:ZDB-GENE-030131-4343]
77. rpl18 ENSDARG00000029533 221.62 1661.01 ribosomal protein L18 [Source:ZFIN;Acc:ZDB-GENE-040801-165]
78. rplp0 ENSDARG00000051783 221.62 1661.01 ribosomal protein, large, P0 [Source:ZFIN;Acc:ZDB-GENE-000629-1]
79. rps15 ENSDARG00000070849, ENSDARG00000110979 221.62 1661.01 ribosomal protein S15 [Source:ZFIN;Acc:ZDB-GENE-030131-9092]
80. rpl7 ENSDARG00000007320 216.39 1621.81 ribosomal protein L7 [Source:ZFIN;Acc:ZDB-GENE-030131-8654]
81. rps15a ENSDARG00000010160 216.39 1621.81 ribosomal protein S15a [Source:ZFIN;Acc:ZDB-GENE-030131-8708]
82. rps20 ENSDARG00000036044 216.39 1621.81 ribosomal protein S20 [Source:ZFIN;Acc:ZDB-GENE-040426-2284]
83. ttnb ttnb 216.39 1621.81
84. ATP5B 209.41 1569.50 ATP synthase, H+ transporting, mitochondrial F1 complex, beta polypeptide
85. rps27.1 ENSDARG00000023298 207.66 1556.38 ribosomal protein S27, isoform 1 [Source:ZFIN;Acc:ZDB-GENE-050522-549]
86. rpsa ENSDARG00000019181 207.66 1556.38 ribosomal protein SA [Source:ZFIN;Acc:ZDB-GENE-040426-811]
87. rps29 ENSDARG00000041232 205.92 1543.34 ribosomal protein S29 [Source:ZFIN;Acc:ZDB-GENE-040622-5]
88. rps9 ENSDARG00000011405, ENSDARG00000113248 205.92 1543.34 ribosomal protein S9 [Source:ZFIN;Acc:ZDB-GENE-010724-15]
89. cfl1l ENSDARG00000012972 202.43 1517.18 cofilin 1 (non-muscle), like [Source:ZFIN;Acc:ZDB-GENE-040426-2770]
90. rpl39 ENSDARG00000036316, ENSDARG00000117167 200.68 1504.07 ribosomal protein L39 [Source:ZFIN;Acc:ZDB-GENE-040625-51]
91. ctsla ENSDARG00000007836 198.94 1491.03 cathepsin La [Source:ZFIN;Acc:ZDB-GENE-030131-106]
92. si:dkey-150i13.2 ENSDARG00000071052 198.94 1491.03 si:dkey-150i13.2 [Source:ZFIN;Acc:ZDB-GENE-090312-157]
93. faua ENSDARG00000099022 195.45 1464.87 Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed a [Source:ZFIN;Acc:ZDB-GENE-040426-1700]
94. rps19 ENSDARG00000030602 195.45 1464.87 ribosomal protein S19 [Source:ZFIN;Acc:ZDB-GENE-040426-1716]
95. tnnt2c ENSDARG00000032242 195.45 1464.87 troponin T2c, cardiac [Source:ZFIN;Acc:ZDB-GENE-030520-1]
96. fabp2 ENSDARG00000006427, ENSDARG00000110230 193.70 1451.75 fatty acid binding protein 2, intestinal [Source:ZFIN;Acc:ZDB-GENE-991019-5]
97. rps12 ENSDARG00000036875, ENSDARG00000115157 190.21 1425.60 ribosomal protein S12 [Source:ZFIN;Acc:ZDB-GENE-030131-8951]
98. hnrnpa0l ENSDARG00000036161, ENSDARG00000076380, ENSDARG00000114889 188.47 1412.55 heterogeneous nuclear ribonucleoprotein A0, like [Source:ZFIN;Acc:ZDB-GENE-030131-618]
99. si:dkeyp-86f7.3 si:dkeyp-86f7.3 188.47 1412.55
100. RPL29 ENSDARG00000077717 186.72 1399.44 ribosomal protein L29 [Source:ZFIN;Acc:ZDB-GENE-040801-167]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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