Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Zebrafish_28hpf_whole2, section s9.

Sample reads: 133,411. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. krt4 ENSDARG00000017624, ENSDARG00000115790 5825.49 43665.87 keratin 4 [Source:ZFIN;Acc:ZDB-GENE-000607-83]
2. AC024175.4 AC024175.4 4779.60 35826.24
3. zgc:112425 zgc:112425 1507.89 11302.62
4. tmsb4x ENSDARG00000077777 1420.36 10646.53 thymosin beta 4 X-linked [Source:ZFIN;Acc:ZDB-GENE-030131-8304]
5. hmga1a ENSDARG00000028335 1174.40 8802.90 high mobility group AT-hook 1a [Source:ZFIN;Acc:ZDB-GENE-010502-1]
6. mt-co2 ENSDARG00000063908 1162.22 8711.60 cytochrome c oxidase II, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-15]
7. eef1a1l1 ENSDARG00000020850 972.76 7291.47 eukaryotic translation elongation factor 1 alpha 1, like 1 [Source:ZFIN;Acc:ZDB-GENE-990415-52]
8. ppiaa ENSDARG00000009212 858.64 6436.07 peptidylprolyl isomerase Aa (cyclophilin A) [Source:ZFIN;Acc:ZDB-GENE-030131-8556]
9. mt-nd4 ENSDARG00000063917 847.57 6353.09 NADH dehydrogenase 4, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-10]
10. actb2 ENSDARG00000037870 845.35 6336.45 actin, beta 2 [Source:ZFIN;Acc:ZDB-GENE-000329-3]
11. si:dkey-151g10.6 si:dkey-151g10.6 822.08 6162.03
12. mt-nd2 ENSDARG00000063899 794.38 5954.40 NADH dehydrogenase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-8]
13. mt-atp6 ENSDARG00000063911 750.07 5622.27 ATP synthase 6, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-18]
14. zgc:92533 zgc:92533 706.86 5298.38
15. gch2 ENSDARG00000099101 691.35 5182.12 GTP cyclohydrolase 2 [Source:ZFIN;Acc:ZDB-GENE-001205-3]
16. ptmab ENSDARG00000101766 684.70 5132.28 prothymosin alpha b [Source:ZFIN;Acc:ZDB-GENE-030131-8681]
17. actb1 ENSDARG00000037746, ENSDARG00000113649 668.08 5007.70 actin, beta 1 [Source:ZFIN;Acc:ZDB-GENE-000329-1]
18. rpl23 ENSDARG00000053457 664.76 4982.81 ribosomal protein L23 [Source:ZFIN;Acc:ZDB-GENE-030131-8756]
19. mt-co3 ENSDARG00000063912 651.46 4883.12 cytochrome c oxidase III, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-16]
20. rpl10a ENSDARG00000042905, ENSDARG00000115649 599.39 4492.82 ribosomal protein L10a [Source:ZFIN;Acc:ZDB-GENE-030131-2025]
21. pcna ENSDARG00000054155 590.53 4426.41 proliferating cell nuclear antigen [Source:ZFIN;Acc:ZDB-GENE-000210-8]
22. id1 ENSDARG00000040764 575.02 4310.15 inhibitor of DNA binding 1 [Source:ZFIN;Acc:ZDB-GENE-990415-96]
23. eef2b ENSDARG00000100371, ENSDARG00000109247 541.78 4061.00 eukaryotic translation elongation factor 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5128]
24. cyt1l ENSDARG00000036832 498.57 3737.11 type I cytokeratin, enveloping layer, like [Source:ZFIN;Acc:ZDB-GENE-061026-4]
25. rpl8 ENSDARG00000014867 495.24 3712.15 ribosomal protein L8 [Source:ZFIN;Acc:ZDB-GENE-040426-1670]
26. AL954137.2 ENSDARG00000114408 483.06 3620.85
27. hmgn2 ENSDARG00000099572 473.09 3546.12 high mobility group nucleosomal binding domain 2 [Source:ZFIN;Acc:ZDB-GENE-051030-81]
28. hspa8 ENSDARG00000068992, ENSDARG00000114726 464.22 3479.63 heat shock protein 8 [Source:ZFIN;Acc:ZDB-GENE-990415-92]
29. rps26l ENSDARG00000030408 438.74 3288.64 ribosomal protein S26, like [Source:ZFIN;Acc:ZDB-GENE-040426-1706]
30. hsp90ab1 ENSDARG00000029150 432.09 3238.80 heat shock protein 90, alpha (cytosolic), class B member 1 [Source:ZFIN;Acc:ZDB-GENE-990415-95]
31. rpl21 ENSDARG00000010516, ENSDARG00000110263 430.98 3230.48 ribosomal protein L21 [Source:ZFIN;Acc:ZDB-GENE-030131-8512]
32. icn ENSDARG00000009978 405.50 3039.49 ictacalcin [Source:ZFIN;Acc:ZDB-GENE-030131-8599]
33. mt-nd1 ENSDARG00000063895 403.29 3022.92 NADH dehydrogenase 1, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-7]
34. rps23 ENSDARG00000021838 402.18 3014.60 ribosomal protein S23 [Source:ZFIN;Acc:ZDB-GENE-080220-50]
35. cirbp cirbp 399.96 2997.96
36. zgc:113413 zgc:113413 399.96 2997.96
37. mt-cyb ENSDARG00000063924 385.56 2890.03 cytochrome b, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-17]
38. rpl9 ENSDARG00000037350, ENSDARG00000112384 385.56 2890.03 ribosomal protein L9 [Source:ZFIN;Acc:ZDB-GENE-030131-8646]
39. rps27a ENSDARG00000032725, ENSDARG00000114059 385.56 2890.03 ribosomal protein S27a [Source:ZFIN;Acc:ZDB-GENE-030131-10018]
40. rpl18a ENSDARG00000025073 383.34 2873.38 ribosomal protein L18a [Source:ZFIN;Acc:ZDB-GENE-040426-1071]
41. rpl36a ENSDARG00000058105, ENSDARG00000112656 368.94 2765.45 ribosomal protein L36A [Source:ZFIN;Acc:ZDB-GENE-020423-1]
42. zgc:123194 zgc:123194 368.94 2765.45
43. hnrnpab hnrnpab 365.62 2740.56
44. rplp1 ENSDARG00000021864 356.75 2674.08 ribosomal protein, large, P1 [Source:ZFIN;Acc:ZDB-GENE-030131-8663]
45. rpl26 ENSDARG00000102317 341.24 2557.82 ribosomal protein L26 [Source:ZFIN;Acc:ZDB-GENE-040426-2117]
46. rpl19 ENSDARG00000013307 336.81 2524.61 ribosomal protein L19 [Source:ZFIN;Acc:ZDB-GENE-040426-2290]
47. ran ENSDARG00000057026 334.59 2507.97 RAN, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-990415-88]
48. rpl36 ENSDARG00000100588 334.59 2507.97 ribosomal protein L36 [Source:ZFIN;Acc:ZDB-GENE-040622-2]
49. h3f3a 331.27 2483.09 H3 histone, family 3A, transcript variant X1
50. rpl27 ENSDARG00000015128 330.16 2474.77 ribosomal protein L27 [Source:ZFIN;Acc:ZDB-GENE-030131-4343]
51. btf3 ENSDARG00000035400, ENSDARG00000116462 326.84 2449.88 basic transcription factor 3 [Source:ZFIN;Acc:ZDB-GENE-030131-8731]
52. rps15 ENSDARG00000070849, ENSDARG00000110979 320.19 2400.03 ribosomal protein S15 [Source:ZFIN;Acc:ZDB-GENE-030131-9092]
53. fabp3 ENSDARG00000023290 317.98 2383.47 fatty acid binding protein 3, muscle and heart [Source:ZFIN;Acc:ZDB-GENE-020318-2]
54. rps29 ENSDARG00000041232 304.68 2283.78 ribosomal protein S29 [Source:ZFIN;Acc:ZDB-GENE-040622-5]
55. cfl1l ENSDARG00000012972 298.03 2233.93 cofilin 1 (non-muscle), like [Source:ZFIN;Acc:ZDB-GENE-040426-2770]
56. tuba8l4 ENSDARG00000006260 283.63 2125.99 tubulin, alpha 8 like 4 [Source:ZFIN;Acc:ZDB-GENE-040426-860]
57. eif5a ENSDARG00000017235 282.52 2117.67 eukaryotic translation initiation factor 5A [Source:ZFIN;Acc:ZDB-GENE-040426-2229]
58. rps20 ENSDARG00000036044 282.52 2117.67 ribosomal protein S20 [Source:ZFIN;Acc:ZDB-GENE-040426-2284]
59. rpl11 ENSDARG00000043509 273.66 2051.26 ribosomal protein L11 [Source:ZFIN;Acc:ZDB-GENE-040625-147]
60. tuba8l ENSDARG00000042708 273.66 2051.26 tubulin, alpha 8 like [Source:ZFIN;Acc:ZDB-GENE-030131-9167]
61. RPL29 ENSDARG00000077717 269.23 2018.06 ribosomal protein L29 [Source:ZFIN;Acc:ZDB-GENE-040801-167]
62. rps9 ENSDARG00000011405, ENSDARG00000113248 269.23 2018.06 ribosomal protein S9 [Source:ZFIN;Acc:ZDB-GENE-010724-15]
63. rps24 ENSDARG00000039347 264.79 1984.77 ribosomal protein S24 [Source:ZFIN;Acc:ZDB-GENE-040109-5]
64. rps15a ENSDARG00000010160 262.58 1968.21 ribosomal protein S15a [Source:ZFIN;Acc:ZDB-GENE-030131-8708]
65. khdrbs1a ENSDARG00000052856 261.47 1959.89 KH domain containing, RNA binding, signal transduction associated 1a [Source:ZFIN;Acc:ZDB-GENE-000210-25]
66. rpl18 ENSDARG00000029533 259.26 1943.32 ribosomal protein L18 [Source:ZFIN;Acc:ZDB-GENE-040801-165]
67. rps14 ENSDARG00000036629 259.26 1943.32 ribosomal protein S14 [Source:ZFIN;Acc:ZDB-GENE-030131-8631]
68. rps2 ENSDARG00000077291 257.04 1926.68 ribosomal protein S2 [Source:ZFIN;Acc:ZDB-GENE-040426-2454]
69. hnrnpa0l ENSDARG00000036161, ENSDARG00000076380, ENSDARG00000114889 255.93 1918.36 heterogeneous nuclear ribonucleoprotein A0, like [Source:ZFIN;Acc:ZDB-GENE-030131-618]
70. rpsa ENSDARG00000019181 255.93 1918.36 ribosomal protein SA [Source:ZFIN;Acc:ZDB-GENE-040426-811]
71. marcksb ENSDARG00000008803 252.61 1893.48 myristoylated alanine-rich protein kinase C substrate b [Source:ZFIN;Acc:ZDB-GENE-030131-1921]
72. zgc:165571 zgc:165571 252.61 1893.48
73. rpl15 ENSDARG00000009285 250.39 1876.84 ribosomal protein L15 [Source:ZFIN;Acc:ZDB-GENE-040801-183]
74. rps27.1 ENSDARG00000023298 250.39 1876.84 ribosomal protein S27, isoform 1 [Source:ZFIN;Acc:ZDB-GENE-050522-549]
75. eif5a2 ENSDARG00000056186 248.18 1860.27 eukaryotic translation initiation factor 5A2 [Source:ZFIN;Acc:ZDB-GENE-040426-2405]
76. faua ENSDARG00000099022 248.18 1860.27 Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed a [Source:ZFIN;Acc:ZDB-GENE-040426-1700]
77. rps12 ENSDARG00000036875, ENSDARG00000115157 248.18 1860.27 ribosomal protein S12 [Source:ZFIN;Acc:ZDB-GENE-030131-8951]
78. rpl39 ENSDARG00000036316, ENSDARG00000117167 247.07 1851.95 ribosomal protein L39 [Source:ZFIN;Acc:ZDB-GENE-040625-51]
79. rpl6 ENSDARG00000058451 247.07 1851.95 ribosomal protein L6 [Source:ZFIN;Acc:ZDB-GENE-030131-8671]
80. rplp0 ENSDARG00000051783 234.88 1760.58 ribosomal protein, large, P0 [Source:ZFIN;Acc:ZDB-GENE-000629-1]
81. rplp2l ENSDARG00000011201 234.88 1760.58 ribosomal protein, large P2, like [Source:ZFIN;Acc:ZDB-GENE-070327-2]
82. col1a1a ENSDARG00000012405, ENSDARG00000116113 233.77 1752.26 collagen, type I, alpha 1a [Source:ZFIN;Acc:ZDB-GENE-030131-9102]
83. pabpc1a ENSDARG00000017219 231.56 1735.69 poly(A) binding protein, cytoplasmic 1a [Source:ZFIN;Acc:ZDB-GENE-030131-3238]
84. rps4x ENSDARG00000014690 228.23 1710.73 ribosomal protein S4 X-linked [Source:ZFIN;Acc:ZDB-GENE-040927-19]
85. rps5 ENSDARG00000043453 228.23 1710.73 ribosomal protein S5 [Source:ZFIN;Acc:ZDB-GENE-020419-12]
86. rps6 ENSDARG00000019778 228.23 1710.73 ribosomal protein S6 [Source:ZFIN;Acc:ZDB-GENE-040801-8]
87. rpl7 ENSDARG00000007320 222.69 1669.21 ribosomal protein L7 [Source:ZFIN;Acc:ZDB-GENE-030131-8654]
88. rpl14 ENSDARG00000103433 217.15 1627.68 ribosomal protein L14 [Source:ZFIN;Acc:ZDB-GENE-030131-2085]
89. calm3a_1 ENSDARG00000015050, ENSDARG00000100825 209.40 1569.59 calmodulin 3a (phosphorylase kinase, delta) [Source:ZFIN;Acc:ZDB-GENE-030131-5590]
90. rps19 ENSDARG00000030602 206.07 1544.63 ribosomal protein S19 [Source:ZFIN;Acc:ZDB-GENE-040426-1716]
91. si:dkeyp-86f7.3 si:dkeyp-86f7.3 206.07 1544.63
92. rpl35 ENSDARG00000018334 204.97 1536.38 ribosomal protein L35 [Source:ZFIN;Acc:ZDB-GENE-020419-2]
93. pfn1 ENSDARG00000088091 203.86 1528.06 profilin 1 [Source:ZFIN;Acc:ZDB-GENE-031002-33]
94. rpl5b ENSDARG00000015862, ENSDARG00000109661 202.75 1519.74 ribosomal protein L5b [Source:ZFIN;Acc:ZDB-GENE-040625-93]
95. zgc:153129 zgc:153129 202.75 1519.74
96. rps10 ENSDARG00000034897 200.54 1503.18 ribosomal protein S10 [Source:ZFIN;Acc:ZDB-GENE-040426-1481]
97. h2afvb ENSDARG00000116491 199.43 1494.86 H2A histone family, member Vb [Source:ZFIN;Acc:ZDB-GENE-050506-24]
98. rps18 ENSDARG00000100392 197.21 1478.22 ribosomal protein S18 [Source:ZFIN;Acc:ZDB-GENE-020419-20]
99. cfl1 ENSDARG00000021124 196.10 1469.90 cofilin 1 [Source:ZFIN;Acc:ZDB-GENE-030131-215]
100. fkbp1aa ENSDARG00000022684 196.10 1469.90 FK506 binding protein 1Aa [Source:ZFIN;Acc:ZDB-GENE-030131-7275]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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