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Experiment Zebrafish_28hpf_whole2, section s66.

Sample reads: 133,407. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. krt4 ENSDARG00000017624, ENSDARG00000115790 5881.76 44088.79 keratin 4 [Source:ZFIN;Acc:ZDB-GENE-000607-83]
2. AC024175.4 AC024175.4 3981.83 29847.20
3. tmsb4x ENSDARG00000077777 2009.12 15060.06 thymosin beta 4 X-linked [Source:ZFIN;Acc:ZDB-GENE-030131-8304]
4. mt-nd2 ENSDARG00000063899 1368.53 10258.29 NADH dehydrogenase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-8]
5. actb1 ENSDARG00000037746, ENSDARG00000113649 1157.43 8675.92 actin, beta 1 [Source:ZFIN;Acc:ZDB-GENE-000329-1]
6. actb2 ENSDARG00000037870 1062.79 7966.51 actin, beta 2 [Source:ZFIN;Acc:ZDB-GENE-000329-3]
7. mt-co2 ENSDARG00000063908 1026.40 7693.74 cytochrome c oxidase II, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-15]
8. mt-atp6 ENSDARG00000063911 917.21 6875.27 ATP synthase 6, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-18]
9. eef1a1l1 ENSDARG00000020850 902.65 6766.13 eukaryotic translation elongation factor 1 alpha 1, like 1 [Source:ZFIN;Acc:ZDB-GENE-990415-52]
10. hmga1a ENSDARG00000028335 902.65 6766.13 high mobility group AT-hook 1a [Source:ZFIN;Acc:ZDB-GENE-010502-1]
11. mt-nd4 ENSDARG00000063917 858.97 6438.71 NADH dehydrogenase 4, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-10]
12. zgc:112425 zgc:112425 829.85 6220.43
13. mt-nd1 ENSDARG00000063895 771.62 5783.95 NADH dehydrogenase 1, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-7]
14. si:dkey-151g10.6 si:dkey-151g10.6 764.34 5729.38
15. ppiaa ENSDARG00000009212 727.94 5456.53 peptidylprolyl isomerase Aa (cyclophilin A) [Source:ZFIN;Acc:ZDB-GENE-030131-8556]
16. rpl10a ENSDARG00000042905, ENSDARG00000115649 669.71 5020.05 ribosomal protein L10a [Source:ZFIN;Acc:ZDB-GENE-030131-2025]
17. mt-co3 ENSDARG00000063912 633.31 4747.20 cytochrome c oxidase III, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-16]
18. eef2b ENSDARG00000100371, ENSDARG00000109247 596.91 4474.35 eukaryotic translation elongation factor 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5128]
19. hspa8 ENSDARG00000068992, ENSDARG00000114726 589.63 4419.78 heat shock protein 8 [Source:ZFIN;Acc:ZDB-GENE-990415-92]
20. tpma ENSDARG00000033683 589.63 4419.78 alpha-tropomyosin [Source:ZFIN;Acc:ZDB-GENE-990415-269]
21. rpl18a ENSDARG00000025073 553.23 4146.93 ribosomal protein L18a [Source:ZFIN;Acc:ZDB-GENE-040426-1071]
22. rpl8 ENSDARG00000014867 553.23 4146.93 ribosomal protein L8 [Source:ZFIN;Acc:ZDB-GENE-040426-1670]
23. rpl21 ENSDARG00000010516, ENSDARG00000110263 509.56 3819.59 ribosomal protein L21 [Source:ZFIN;Acc:ZDB-GENE-030131-8512]
24. rps23 ENSDARG00000021838 502.28 3765.02 ribosomal protein S23 [Source:ZFIN;Acc:ZDB-GENE-080220-50]
25. btf3 ENSDARG00000035400, ENSDARG00000116462 495.00 3710.45 basic transcription factor 3 [Source:ZFIN;Acc:ZDB-GENE-030131-8731]
26. rps27a ENSDARG00000032725, ENSDARG00000114059 495.00 3710.45 ribosomal protein S27a [Source:ZFIN;Acc:ZDB-GENE-030131-10018]
27. zgc:92533 zgc:92533 487.72 3655.88
28. col1a1a ENSDARG00000012405, ENSDARG00000116113 473.16 3546.74 collagen, type I, alpha 1a [Source:ZFIN;Acc:ZDB-GENE-030131-9102]
29. id1 ENSDARG00000040764 465.88 3492.17 inhibitor of DNA binding 1 [Source:ZFIN;Acc:ZDB-GENE-990415-96]
30. rps14 ENSDARG00000036629 436.76 3273.89 ribosomal protein S14 [Source:ZFIN;Acc:ZDB-GENE-030131-8631]
31. rplp1 ENSDARG00000021864 414.93 3110.25 ribosomal protein, large, P1 [Source:ZFIN;Acc:ZDB-GENE-030131-8663]
32. mt-cyb ENSDARG00000063924 407.65 3055.68 cytochrome b, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-17]
33. zgc:66286 zgc:66286 400.37 3001.11
34. myl10 ENSDARG00000062592 385.81 2891.97 myosin, light chain 10, regulatory [Source:ZFIN;Acc:ZDB-GENE-050417-421]
35. rpl27 ENSDARG00000015128 385.81 2891.97 ribosomal protein L27 [Source:ZFIN;Acc:ZDB-GENE-030131-4343]
36. rpl26 ENSDARG00000102317 378.53 2837.40 ribosomal protein L26 [Source:ZFIN;Acc:ZDB-GENE-040426-2117]
37. ptmab ENSDARG00000101766 371.25 2782.83 prothymosin alpha b [Source:ZFIN;Acc:ZDB-GENE-030131-8681]
38. rpl9 ENSDARG00000037350, ENSDARG00000112384 371.25 2782.83 ribosomal protein L9 [Source:ZFIN;Acc:ZDB-GENE-030131-8646]
39. cfl1l ENSDARG00000012972 363.97 2728.26 cofilin 1 (non-muscle), like [Source:ZFIN;Acc:ZDB-GENE-040426-2770]
40. pcna ENSDARG00000054155 363.97 2728.26 proliferating cell nuclear antigen [Source:ZFIN;Acc:ZDB-GENE-000210-8]
41. efemp2a ENSDARG00000094324 356.69 2673.69 EGF containing fibulin extracellular matrix protein 2a [Source:ZFIN;Acc:ZDB-GENE-041212-8]
42. rps26l ENSDARG00000030408 356.69 2673.69 ribosomal protein S26, like [Source:ZFIN;Acc:ZDB-GENE-040426-1706]
43. rps12 ENSDARG00000036875, ENSDARG00000115157 349.41 2619.12 ribosomal protein S12 [Source:ZFIN;Acc:ZDB-GENE-030131-8951]
44. cyt1l ENSDARG00000036832 342.13 2564.56 type I cytokeratin, enveloping layer, like [Source:ZFIN;Acc:ZDB-GENE-061026-4]
45. rps2 ENSDARG00000077291 334.85 2509.99 ribosomal protein S2 [Source:ZFIN;Acc:ZDB-GENE-040426-2454]
46. rpl23 ENSDARG00000053457 327.57 2455.42 ribosomal protein L23 [Source:ZFIN;Acc:ZDB-GENE-030131-8756]
47. rpl36 ENSDARG00000100588 327.57 2455.42 ribosomal protein L36 [Source:ZFIN;Acc:ZDB-GENE-040622-2]
48. ckmb ENSDARG00000040565 320.29 2400.85 creatine kinase, muscle b [Source:ZFIN;Acc:ZDB-GENE-040426-2128]
49. eif5a ENSDARG00000017235 320.29 2400.85 eukaryotic translation initiation factor 5A [Source:ZFIN;Acc:ZDB-GENE-040426-2229]
50. rpl18 ENSDARG00000029533 320.29 2400.85 ribosomal protein L18 [Source:ZFIN;Acc:ZDB-GENE-040801-165]
51. mt-co1 ENSDARG00000063905 313.01 2346.28 cytochrome c oxidase I, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-14]
52. rpl19 ENSDARG00000013307 313.01 2346.28 ribosomal protein L19 [Source:ZFIN;Acc:ZDB-GENE-040426-2290]
53. rpl6 ENSDARG00000058451 313.01 2346.28 ribosomal protein L6 [Source:ZFIN;Acc:ZDB-GENE-030131-8671]
54. rpl11 ENSDARG00000043509 298.46 2237.21 ribosomal protein L11 [Source:ZFIN;Acc:ZDB-GENE-040625-147]
55. rps5 ENSDARG00000043453 298.46 2237.21 ribosomal protein S5 [Source:ZFIN;Acc:ZDB-GENE-020419-12]
56. actc1b ENSDARG00000099197 283.90 2128.07 actin, alpha, cardiac muscle 1b [Source:ZFIN;Acc:ZDB-GENE-000322-1]
57. cd81 cd81 283.90 2128.07
58. cirbp cirbp 283.90 2128.07
59. rpl15 ENSDARG00000009285 276.62 2073.50 ribosomal protein L15 [Source:ZFIN;Acc:ZDB-GENE-040801-183]
60. RPL29 ENSDARG00000077717 269.34 2018.93 ribosomal protein L29 [Source:ZFIN;Acc:ZDB-GENE-040801-167]
61. ckma ENSDARG00000035327, ENSDARG00000114671 269.34 2018.93 creatine kinase, muscle a [Source:ZFIN;Acc:ZDB-GENE-980526-109]
62. rps20 ENSDARG00000036044 269.34 2018.93 ribosomal protein S20 [Source:ZFIN;Acc:ZDB-GENE-040426-2284]
63. rps29 ENSDARG00000041232 269.34 2018.93 ribosomal protein S29 [Source:ZFIN;Acc:ZDB-GENE-040622-5]
64. fabp3 ENSDARG00000023290 262.06 1964.36 fatty acid binding protein 3, muscle and heart [Source:ZFIN;Acc:ZDB-GENE-020318-2]
65. faua ENSDARG00000099022 262.06 1964.36 Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed a [Source:ZFIN;Acc:ZDB-GENE-040426-1700]
66. hmgn2 ENSDARG00000099572 254.78 1909.79 high mobility group nucleosomal binding domain 2 [Source:ZFIN;Acc:ZDB-GENE-051030-81]
67. rpl7 ENSDARG00000007320 254.78 1909.79 ribosomal protein L7 [Source:ZFIN;Acc:ZDB-GENE-030131-8654]
68. rps15 ENSDARG00000070849, ENSDARG00000110979 254.78 1909.79 ribosomal protein S15 [Source:ZFIN;Acc:ZDB-GENE-030131-9092]
69. cfl1 ENSDARG00000021124 247.50 1855.22 cofilin 1 [Source:ZFIN;Acc:ZDB-GENE-030131-215]
70. hsp90ab1 ENSDARG00000029150 247.50 1855.22 heat shock protein 90, alpha (cytosolic), class B member 1 [Source:ZFIN;Acc:ZDB-GENE-990415-95]
71. rps19 ENSDARG00000030602 247.50 1855.22 ribosomal protein S19 [Source:ZFIN;Acc:ZDB-GENE-040426-1716]
72. rps27.1 ENSDARG00000023298 247.50 1855.22 ribosomal protein S27, isoform 1 [Source:ZFIN;Acc:ZDB-GENE-050522-549]
73. rps6 ENSDARG00000019778 247.50 1855.22 ribosomal protein S6 [Source:ZFIN;Acc:ZDB-GENE-040801-8]
74. rps9 ENSDARG00000011405, ENSDARG00000113248 247.50 1855.22 ribosomal protein S9 [Source:ZFIN;Acc:ZDB-GENE-010724-15]
75. RPS17L RPS17L 240.22 1800.65
76. acta1a ENSDARG00000036371 240.22 1800.65 actin, alpha 1a, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-050417-267]
77. hnrnpa0l ENSDARG00000036161, ENSDARG00000076380, ENSDARG00000114889 240.22 1800.65 heterogeneous nuclear ribonucleoprotein A0, like [Source:ZFIN;Acc:ZDB-GENE-030131-618]
78. hsp90aa1.1 ENSDARG00000010478 240.22 1800.65 heat shock protein 90, alpha (cytosolic), class A member 1, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-990415-94]
79. rplp2l ENSDARG00000011201 240.22 1800.65 ribosomal protein, large P2, like [Source:ZFIN;Acc:ZDB-GENE-070327-2]
80. si:dkeyp-86f7.3 si:dkeyp-86f7.3 240.22 1800.65
81. tnnc2 ENSDARG00000070835, ENSDARG00000111155 232.94 1746.08 troponin C type 2 (fast) [Source:ZFIN;Acc:ZDB-GENE-000322-2]
82. rplp0 ENSDARG00000051783 225.66 1691.51 ribosomal protein, large, P0 [Source:ZFIN;Acc:ZDB-GENE-000629-1]
83. tpm3 ENSDARG00000005162 225.66 1691.51 tropomyosin 3 [Source:ZFIN;Acc:ZDB-GENE-030826-16]
84. marcksb ENSDARG00000008803 218.38 1636.94 myristoylated alanine-rich protein kinase C substrate b [Source:ZFIN;Acc:ZDB-GENE-030131-1921]
85. pabpc1a ENSDARG00000017219 218.38 1636.94 poly(A) binding protein, cytoplasmic 1a [Source:ZFIN;Acc:ZDB-GENE-030131-3238]
86. rpl36a ENSDARG00000058105, ENSDARG00000112656 218.38 1636.94 ribosomal protein L36A [Source:ZFIN;Acc:ZDB-GENE-020423-1]
87. rpl39 ENSDARG00000036316, ENSDARG00000117167 218.38 1636.94 ribosomal protein L39 [Source:ZFIN;Acc:ZDB-GENE-040625-51]
88. col2a1a ENSDARG00000069093, ENSDARG00000111202 211.10 1582.37 collagen, type II, alpha 1a [Source:ZFIN;Acc:ZDB-GENE-980526-192]
89. ran ENSDARG00000057026 203.82 1527.80 RAN, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-990415-88]
90. rpsa ENSDARG00000019181 203.82 1527.80 ribosomal protein SA [Source:ZFIN;Acc:ZDB-GENE-040426-811]
91. rps13 ENSDARG00000036298, ENSDARG00000112818 196.54 1473.23 ribosomal protein S13 [Source:ZFIN;Acc:ZDB-GENE-040625-52]
92. rps15a ENSDARG00000010160 196.54 1473.23 ribosomal protein S15a [Source:ZFIN;Acc:ZDB-GENE-030131-8708]
93. si:ch1073-429i10.3 196.54 1473.23 si:ch1073-429i10.3, transcript variant X2
94. smyhc1 ENSDARG00000099959, ENSDARG00000115916 196.54 1473.23 slow myosin heavy chain 1 [Source:ZFIN;Acc:ZDB-GENE-030131-271]
95. h3f3a 189.26 1418.66 H3 histone, family 3A, transcript variant X1
96. rpl24 ENSDARG00000099104 189.26 1418.66 ribosomal protein L24 [Source:ZFIN;Acc:ZDB-GENE-020419-25]
97. rpl30 ENSDARG00000035871, ENSDARG00000109253 189.26 1418.66 ribosomal protein L30 [Source:ZFIN;Acc:ZDB-GENE-030131-8657]
98. rps24 ENSDARG00000039347 189.26 1418.66 ribosomal protein S24 [Source:ZFIN;Acc:ZDB-GENE-040109-5]
99. rps4x ENSDARG00000014690 189.26 1418.66 ribosomal protein S4 X-linked [Source:ZFIN;Acc:ZDB-GENE-040927-19]
100. uba52 ENSDARG00000041435 189.26 1418.66 ubiquitin A-52 residue ribosomal protein fusion product 1 [Source:ZFIN;Acc:ZDB-GENE-051023-7]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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