Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Zebrafish_28hpf_whole2, section s64.

Sample reads: 133,404. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. krt4 ENSDARG00000017624, ENSDARG00000115790 5102.00 38250.12 keratin 4 [Source:ZFIN;Acc:ZDB-GENE-000607-83]
2. AC024175.4 AC024175.4 4576.80 34312.65
3. tmsb4x ENSDARG00000077777 1819.46 13640.64 thymosin beta 4 X-linked [Source:ZFIN;Acc:ZDB-GENE-030131-8304]
4. mt-nd2 ENSDARG00000063899 1575.62 11812.56 NADH dehydrogenase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-8]
5. actb2 ENSDARG00000037870 1237.99 9281.32 actin, beta 2 [Source:ZFIN;Acc:ZDB-GENE-000329-3]
6. mt-co2 ENSDARG00000063908 1181.71 8859.38 cytochrome c oxidase II, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-15]
7. tpma ENSDARG00000033683 1125.44 8437.52 alpha-tropomyosin [Source:ZFIN;Acc:ZDB-GENE-990415-269]
8. actb1 ENSDARG00000037746, ENSDARG00000113649 1069.17 8015.66 actin, beta 1 [Source:ZFIN;Acc:ZDB-GENE-000329-1]
9. eef1a1l1 ENSDARG00000020850 975.38 7312.51 eukaryotic translation elongation factor 1 alpha 1, like 1 [Source:ZFIN;Acc:ZDB-GENE-990415-52]
10. ppiaa ENSDARG00000009212 975.38 7312.51 peptidylprolyl isomerase Aa (cyclophilin A) [Source:ZFIN;Acc:ZDB-GENE-030131-8556]
11. mt-nd4 ENSDARG00000063917 881.60 6609.43 NADH dehydrogenase 4, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-10]
12. mt-atp6 ENSDARG00000063911 806.57 6046.92 ATP synthase 6, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-18]
13. ckmb ENSDARG00000040565 787.81 5906.28 creatine kinase, muscle b [Source:ZFIN;Acc:ZDB-GENE-040426-2128]
14. si:dkey-151g10.6 si:dkey-151g10.6 731.54 5484.42
15. mt-co3 ENSDARG00000063912 712.78 5343.77 cytochrome c oxidase III, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-16]
16. zgc:112425 zgc:112425 656.51 4921.91
17. hmga1a ENSDARG00000028335 637.75 4781.27 high mobility group AT-hook 1a [Source:ZFIN;Acc:ZDB-GENE-010502-1]
18. mt-nd1 ENSDARG00000063895 637.75 4781.27 NADH dehydrogenase 1, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-7]
19. myl10 ENSDARG00000062592 618.99 4640.62 myosin, light chain 10, regulatory [Source:ZFIN;Acc:ZDB-GENE-050417-421]
20. rpl18a ENSDARG00000025073 618.99 4640.62 ribosomal protein L18a [Source:ZFIN;Acc:ZDB-GENE-040426-1071]
21. rps27a ENSDARG00000032725, ENSDARG00000114059 562.72 4218.76 ribosomal protein S27a [Source:ZFIN;Acc:ZDB-GENE-030131-10018]
22. fabp3 ENSDARG00000023290 543.96 4078.11 fatty acid binding protein 3, muscle and heart [Source:ZFIN;Acc:ZDB-GENE-020318-2]
23. eef2b ENSDARG00000100371, ENSDARG00000109247 525.21 3937.54 eukaryotic translation elongation factor 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5128]
24. zgc:66286 zgc:66286 525.21 3937.54
25. acta1a ENSDARG00000036371 506.45 3796.90 actin, alpha 1a, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-050417-267]
26. rps23 ENSDARG00000021838 506.45 3796.90 ribosomal protein S23 [Source:ZFIN;Acc:ZDB-GENE-080220-50]
27. rpl10a ENSDARG00000042905, ENSDARG00000115649 487.69 3656.25 ribosomal protein L10a [Source:ZFIN;Acc:ZDB-GENE-030131-2025]
28. rpl26 ENSDARG00000102317 487.69 3656.25 ribosomal protein L26 [Source:ZFIN;Acc:ZDB-GENE-040426-2117]
29. rps15 ENSDARG00000070849, ENSDARG00000110979 468.93 3515.61 ribosomal protein S15 [Source:ZFIN;Acc:ZDB-GENE-030131-9092]
30. cfl1l ENSDARG00000012972 412.66 3093.75 cofilin 1 (non-muscle), like [Source:ZFIN;Acc:ZDB-GENE-040426-2770]
31. ckma ENSDARG00000035327, ENSDARG00000114671 412.66 3093.75 creatine kinase, muscle a [Source:ZFIN;Acc:ZDB-GENE-980526-109]
32. hsp90aa1.1 ENSDARG00000010478 393.90 2953.10 heat shock protein 90, alpha (cytosolic), class A member 1, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-990415-94]
33. rpl23 ENSDARG00000053457 393.90 2953.10 ribosomal protein L23 [Source:ZFIN;Acc:ZDB-GENE-030131-8756]
34. rpl6 ENSDARG00000058451 393.90 2953.10 ribosomal protein L6 [Source:ZFIN;Acc:ZDB-GENE-030131-8671]
35. rps4x ENSDARG00000014690 393.90 2953.10 ribosomal protein S4 X-linked [Source:ZFIN;Acc:ZDB-GENE-040927-19]
36. mt-cyb ENSDARG00000063924 375.15 2812.53 cytochrome b, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-17]
37. rpl8 ENSDARG00000014867 375.15 2812.53 ribosomal protein L8 [Source:ZFIN;Acc:ZDB-GENE-040426-1670]
38. rps2 ENSDARG00000077291 375.15 2812.53 ribosomal protein S2 [Source:ZFIN;Acc:ZDB-GENE-040426-2454]
39. rpl28 ENSDARG00000005791 356.39 2671.89 ribosomal protein L28 [Source:ZFIN;Acc:ZDB-GENE-040930-10]
40. rpl11 ENSDARG00000043509 337.63 2531.24 ribosomal protein L11 [Source:ZFIN;Acc:ZDB-GENE-040625-147]
41. tnnc2 ENSDARG00000070835, ENSDARG00000111155 337.63 2531.24 troponin C type 2 (fast) [Source:ZFIN;Acc:ZDB-GENE-000322-2]
42. zgc:92533 zgc:92533 337.63 2531.24
43. actc1b ENSDARG00000099197 318.88 2390.67 actin, alpha, cardiac muscle 1b [Source:ZFIN;Acc:ZDB-GENE-000322-1]
44. atp2a1 ENSDARG00000020574 318.88 2390.67 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 1 [Source:ZFIN;Acc:ZDB-GENE-020905-1]
45. btf3 ENSDARG00000035400, ENSDARG00000116462 318.88 2390.67 basic transcription factor 3 [Source:ZFIN;Acc:ZDB-GENE-030131-8731]
46. col11a1a ENSDARG00000026165, ENSDARG00000115341 318.88 2390.67 collagen, type XI, alpha 1a [Source:ZFIN;Acc:ZDB-GENE-070209-167]
47. col1a1a ENSDARG00000012405, ENSDARG00000116113 318.88 2390.67 collagen, type I, alpha 1a [Source:ZFIN;Acc:ZDB-GENE-030131-9102]
48. mylz3 ENSDARG00000017441 318.88 2390.67 myosin, light polypeptide 3, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-000322-6]
49. rpl17 ENSDARG00000057556 318.88 2390.67 ribosomal protein L17 [Source:ZFIN;Acc:ZDB-GENE-030131-8585]
50. rpl19 ENSDARG00000013307 318.88 2390.67 ribosomal protein L19 [Source:ZFIN;Acc:ZDB-GENE-040426-2290]
51. rpl7 ENSDARG00000007320 318.88 2390.67 ribosomal protein L7 [Source:ZFIN;Acc:ZDB-GENE-030131-8654]
52. RPL29 ENSDARG00000077717 300.12 2250.02 ribosomal protein L29 [Source:ZFIN;Acc:ZDB-GENE-040801-167]
53. cirbp cirbp 300.12 2250.02
54. efemp2a ENSDARG00000094324 300.12 2250.02 EGF containing fibulin extracellular matrix protein 2a [Source:ZFIN;Acc:ZDB-GENE-041212-8]
55. fkbp1aa ENSDARG00000022684 300.12 2250.02 FK506 binding protein 1Aa [Source:ZFIN;Acc:ZDB-GENE-030131-7275]
56. h3f3b.1 ENSDARG00000020504, ENSDARG00000068434, ENSDARG00000068436 300.12 2250.02 H3 histone, family 3B.1 [Source:ZFIN;Acc:ZDB-GENE-050417-65]
57. hmgn2 ENSDARG00000099572 300.12 2250.02 high mobility group nucleosomal binding domain 2 [Source:ZFIN;Acc:ZDB-GENE-051030-81]
58. rpl36a ENSDARG00000058105, ENSDARG00000112656 300.12 2250.02 ribosomal protein L36A [Source:ZFIN;Acc:ZDB-GENE-020423-1]
59. si:ch1073-429i10.3 300.12 2250.02 si:ch1073-429i10.3, transcript variant X2
60. hspa8 ENSDARG00000068992, ENSDARG00000114726 281.36 2109.38 heat shock protein 8 [Source:ZFIN;Acc:ZDB-GENE-990415-92]
61. rpl27 ENSDARG00000015128 281.36 2109.38 ribosomal protein L27 [Source:ZFIN;Acc:ZDB-GENE-030131-4343]
62. rpl9 ENSDARG00000037350, ENSDARG00000112384 281.36 2109.38 ribosomal protein L9 [Source:ZFIN;Acc:ZDB-GENE-030131-8646]
63. rplp0 ENSDARG00000051783 281.36 2109.38 ribosomal protein, large, P0 [Source:ZFIN;Acc:ZDB-GENE-000629-1]
64. rps20 ENSDARG00000036044 281.36 2109.38 ribosomal protein S20 [Source:ZFIN;Acc:ZDB-GENE-040426-2284]
65. rps26l ENSDARG00000030408 281.36 2109.38 ribosomal protein S26, like [Source:ZFIN;Acc:ZDB-GENE-040426-1706]
66. rps6 ENSDARG00000019778 281.36 2109.38 ribosomal protein S6 [Source:ZFIN;Acc:ZDB-GENE-040801-8]
67. cyt1l ENSDARG00000036832 262.60 1968.73 type I cytokeratin, enveloping layer, like [Source:ZFIN;Acc:ZDB-GENE-061026-4]
68. faua ENSDARG00000099022 262.60 1968.73 Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed a [Source:ZFIN;Acc:ZDB-GENE-040426-1700]
69. pabpc1a ENSDARG00000017219 262.60 1968.73 poly(A) binding protein, cytoplasmic 1a [Source:ZFIN;Acc:ZDB-GENE-030131-3238]
70. rpl24 ENSDARG00000099104 262.60 1968.73 ribosomal protein L24 [Source:ZFIN;Acc:ZDB-GENE-020419-25]
71. tnnt2c ENSDARG00000032242 262.60 1968.73 troponin T2c, cardiac [Source:ZFIN;Acc:ZDB-GENE-030520-1]
72. zgc:123194 zgc:123194 262.60 1968.73
73. zgc:165571 zgc:165571 262.60 1968.73
74. RPL37A RPL37A 243.85 1828.16
75. cfl1 ENSDARG00000021124 243.85 1828.16 cofilin 1 [Source:ZFIN;Acc:ZDB-GENE-030131-215]
76. cox4i1 ENSDARG00000032970 243.85 1828.16 cytochrome c oxidase subunit 4I1 [Source:ZFIN;Acc:ZDB-GENE-030131-5175]
77. cycsb ENSDARG00000044562 243.85 1828.16 cytochrome c, somatic b [Source:ZFIN;Acc:ZDB-GENE-040625-38]
78. id1 ENSDARG00000040764 243.85 1828.16 inhibitor of DNA binding 1 [Source:ZFIN;Acc:ZDB-GENE-990415-96]
79. pnrc2 ENSDARG00000053291, ENSDARG00000112537 243.85 1828.16 proline-rich nuclear receptor coactivator 2 [Source:ZFIN;Acc:ZDB-GENE-030131-5475]
80. rplp1 ENSDARG00000021864 243.85 1828.16 ribosomal protein, large, P1 [Source:ZFIN;Acc:ZDB-GENE-030131-8663]
81. rplp2l ENSDARG00000011201 243.85 1828.16 ribosomal protein, large P2, like [Source:ZFIN;Acc:ZDB-GENE-070327-2]
82. rpsa ENSDARG00000019181 243.85 1828.16 ribosomal protein SA [Source:ZFIN;Acc:ZDB-GENE-040426-811]
83. anxa1c ENSDARG00000104359 225.09 1687.52 annexin A1c [Source:ZFIN;Acc:ZDB-GENE-030131-5274]
84. cd81 cd81 225.09 1687.52
85. col1a1b ENSDARG00000035809 225.09 1687.52 collagen, type I, alpha 1b [Source:ZFIN;Acc:ZDB-GENE-030131-4400]
86. col9a1 col9a1 225.09 1687.52
87. emp2 ENSDARG00000044588 225.09 1687.52 epithelial membrane protein 2 [Source:ZFIN;Acc:ZDB-GENE-040822-24]
88. mylpfa ENSDARG00000053254, ENSDARG00000112448, ENSDARG00000113256 225.09 1687.52 myosin light chain, phosphorylatable, fast skeletal muscle a [Source:ZFIN;Acc:ZDB-GENE-990712-15]
89. rpl38 ENSDARG00000006413 225.09 1687.52 ribosomal protein L38 [Source:ZFIN;Acc:ZDB-GENE-030131-8752]
90. rpl5b ENSDARG00000015862, ENSDARG00000109661 225.09 1687.52 ribosomal protein L5b [Source:ZFIN;Acc:ZDB-GENE-040625-93]
91. rps12 ENSDARG00000036875, ENSDARG00000115157 225.09 1687.52 ribosomal protein S12 [Source:ZFIN;Acc:ZDB-GENE-030131-8951]
92. rps18 ENSDARG00000100392 225.09 1687.52 ribosomal protein S18 [Source:ZFIN;Acc:ZDB-GENE-020419-20]
93. rps9 ENSDARG00000011405, ENSDARG00000113248 225.09 1687.52 ribosomal protein S9 [Source:ZFIN;Acc:ZDB-GENE-010724-15]
94. acta1b ENSDARG00000055618 206.33 1546.87 actin, alpha 1b, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-030131-55]
95. icn ENSDARG00000009978 206.33 1546.87 ictacalcin [Source:ZFIN;Acc:ZDB-GENE-030131-8599]
96. mt-co1 ENSDARG00000063905 206.33 1546.87 cytochrome c oxidase I, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-14]
97. rpl36 ENSDARG00000100588 206.33 1546.87 ribosomal protein L36 [Source:ZFIN;Acc:ZDB-GENE-040622-2]
98. rps13 ENSDARG00000036298, ENSDARG00000112818 206.33 1546.87 ribosomal protein S13 [Source:ZFIN;Acc:ZDB-GENE-040625-52]
99. rps19 ENSDARG00000030602 206.33 1546.87 ribosomal protein S19 [Source:ZFIN;Acc:ZDB-GENE-040426-1716]
100. rps27.1 ENSDARG00000023298 206.33 1546.87 ribosomal protein S27, isoform 1 [Source:ZFIN;Acc:ZDB-GENE-050522-549]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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