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Experiment Zebrafish_28hpf_whole2, section s61.

Sample reads: 133,404. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. krt4 ENSDARG00000017624, ENSDARG00000115790 5892.66 44171.43 keratin 4 [Source:ZFIN;Acc:ZDB-GENE-000607-83]
2. tmsb4x ENSDARG00000077777 2481.12 18598.50 thymosin beta 4 X-linked [Source:ZFIN;Acc:ZDB-GENE-030131-8304]
3. AC024175.4 AC024175.4 2311.95 17330.40
4. mt-co2 ENSDARG00000063908 1578.89 11835.37 cytochrome c oxidase II, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-15]
5. ckmb ENSDARG00000040565 1381.53 10355.96 creatine kinase, muscle b [Source:ZFIN;Acc:ZDB-GENE-040426-2128]
6. mt-nd2 ENSDARG00000063899 1311.05 9827.64 NADH dehydrogenase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-8]
7. mt-nd1 ENSDARG00000063895 1212.36 9087.86 NADH dehydrogenase 1, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-7]
8. mt-atp6 ENSDARG00000063911 1155.98 8665.24 ATP synthase 6, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-18]
9. tpma ENSDARG00000033683 1113.68 8348.15 alpha-tropomyosin [Source:ZFIN;Acc:ZDB-GENE-990415-269]
10. mt-nd4 ENSDARG00000063917 1085.49 8136.84 NADH dehydrogenase 4, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-10]
11. si:dkey-151g10.6 si:dkey-151g10.6 958.61 7185.75
12. ppiaa ENSDARG00000009212 859.93 6446.04 peptidylprolyl isomerase Aa (cyclophilin A) [Source:ZFIN;Acc:ZDB-GENE-030131-8556]
13. zgc:112425 zgc:112425 859.93 6446.04
14. hspa8 ENSDARG00000068992, ENSDARG00000114726 775.35 5812.03 heat shock protein 8 [Source:ZFIN;Acc:ZDB-GENE-990415-92]
15. mt-co3 ENSDARG00000063912 761.25 5706.34 cytochrome c oxidase III, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-16]
16. eef1a1l1 ENSDARG00000020850 718.96 5389.33 eukaryotic translation elongation factor 1 alpha 1, like 1 [Source:ZFIN;Acc:ZDB-GENE-990415-52]
17. rpl10a ENSDARG00000042905, ENSDARG00000115649 704.86 5283.64 ribosomal protein L10a [Source:ZFIN;Acc:ZDB-GENE-030131-2025]
18. rpl18a ENSDARG00000025073 676.67 5072.32 ribosomal protein L18a [Source:ZFIN;Acc:ZDB-GENE-040426-1071]
19. rpl21 ENSDARG00000010516, ENSDARG00000110263 676.67 5072.32 ribosomal protein L21 [Source:ZFIN;Acc:ZDB-GENE-030131-8512]
20. actb1 ENSDARG00000037746, ENSDARG00000113649 648.47 4860.94 actin, beta 1 [Source:ZFIN;Acc:ZDB-GENE-000329-1]
21. rpl8 ENSDARG00000014867 648.47 4860.94 ribosomal protein L8 [Source:ZFIN;Acc:ZDB-GENE-040426-1670]
22. rps23 ENSDARG00000021838 648.47 4860.94 ribosomal protein S23 [Source:ZFIN;Acc:ZDB-GENE-080220-50]
23. ckma ENSDARG00000035327, ENSDARG00000114671 620.28 4649.62 creatine kinase, muscle a [Source:ZFIN;Acc:ZDB-GENE-980526-109]
24. hmga1a ENSDARG00000028335 592.08 4438.24 high mobility group AT-hook 1a [Source:ZFIN;Acc:ZDB-GENE-010502-1]
25. rpl23 ENSDARG00000053457 577.99 4332.62 ribosomal protein L23 [Source:ZFIN;Acc:ZDB-GENE-030131-8756]
26. rps27a ENSDARG00000032725, ENSDARG00000114059 577.99 4332.62 ribosomal protein S27a [Source:ZFIN;Acc:ZDB-GENE-030131-10018]
27. rps26l ENSDARG00000030408 549.79 4121.23 ribosomal protein S26, like [Source:ZFIN;Acc:ZDB-GENE-040426-1706]
28. rpl26 ENSDARG00000102317 535.70 4015.61 ribosomal protein L26 [Source:ZFIN;Acc:ZDB-GENE-040426-2117]
29. rpl27 ENSDARG00000015128 535.70 4015.61 ribosomal protein L27 [Source:ZFIN;Acc:ZDB-GENE-030131-4343]
30. rpl36 ENSDARG00000100588 535.70 4015.61 ribosomal protein L36 [Source:ZFIN;Acc:ZDB-GENE-040622-2]
31. actb2 ENSDARG00000037870 521.60 3909.92 actin, beta 2 [Source:ZFIN;Acc:ZDB-GENE-000329-3]
32. atp2a1 ENSDARG00000020574 521.60 3909.92 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 1 [Source:ZFIN;Acc:ZDB-GENE-020905-1]
33. tnnc2 ENSDARG00000070835, ENSDARG00000111155 521.60 3909.92 troponin C type 2 (fast) [Source:ZFIN;Acc:ZDB-GENE-000322-2]
34. zgc:66286 zgc:66286 521.60 3909.92
35. btf3 ENSDARG00000035400, ENSDARG00000116462 507.50 3804.22 basic transcription factor 3 [Source:ZFIN;Acc:ZDB-GENE-030131-8731]
36. eef2b ENSDARG00000100371, ENSDARG00000109247 507.50 3804.22 eukaryotic translation elongation factor 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5128]
37. rpl9 ENSDARG00000037350, ENSDARG00000112384 493.40 3698.53 ribosomal protein L9 [Source:ZFIN;Acc:ZDB-GENE-030131-8646]
38. zgc:92533 zgc:92533 493.40 3698.53
39. mt-cyb ENSDARG00000063924 479.31 3592.91 cytochrome b, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-17]
40. rps15 ENSDARG00000070849, ENSDARG00000110979 479.31 3592.91 ribosomal protein S15 [Source:ZFIN;Acc:ZDB-GENE-030131-9092]
41. rps6 ENSDARG00000019778 451.11 3381.52 ribosomal protein S6 [Source:ZFIN;Acc:ZDB-GENE-040801-8]
42. mylz3 ENSDARG00000017441 422.92 3170.21 myosin, light polypeptide 3, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-000322-6]
43. actc1b ENSDARG00000099197 408.82 3064.52 actin, alpha, cardiac muscle 1b [Source:ZFIN;Acc:ZDB-GENE-000322-1]
44. cirbp cirbp 408.82 3064.52
45. mylpfa ENSDARG00000053254, ENSDARG00000112448, ENSDARG00000113256 408.82 3064.52 myosin light chain, phosphorylatable, fast skeletal muscle a [Source:ZFIN;Acc:ZDB-GENE-990712-15]
46. tnni2b.1 ENSDARG00000035958 408.82 3064.52 troponin I type 2b (skeletal, fast), tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-050417-49]
47. myl10 ENSDARG00000062592 394.72 2958.82 myosin, light chain 10, regulatory [Source:ZFIN;Acc:ZDB-GENE-050417-421]
48. rps12 ENSDARG00000036875, ENSDARG00000115157 394.72 2958.82 ribosomal protein S12 [Source:ZFIN;Acc:ZDB-GENE-030131-8951]
49. rps27.1 ENSDARG00000023298 394.72 2958.82 ribosomal protein S27, isoform 1 [Source:ZFIN;Acc:ZDB-GENE-050522-549]
50. rpl19 ENSDARG00000013307 380.63 2853.21 ribosomal protein L19 [Source:ZFIN;Acc:ZDB-GENE-040426-2290]
51. rpl6 ENSDARG00000058451 380.63 2853.21 ribosomal protein L6 [Source:ZFIN;Acc:ZDB-GENE-030131-8671]
52. rps19 ENSDARG00000030602 380.63 2853.21 ribosomal protein S19 [Source:ZFIN;Acc:ZDB-GENE-040426-1716]
53. rps2 ENSDARG00000077291 380.63 2853.21 ribosomal protein S2 [Source:ZFIN;Acc:ZDB-GENE-040426-2454]
54. rps20 ENSDARG00000036044 380.63 2853.21 ribosomal protein S20 [Source:ZFIN;Acc:ZDB-GENE-040426-2284]
55. col1a1a ENSDARG00000012405, ENSDARG00000116113 366.53 2747.51 collagen, type I, alpha 1a [Source:ZFIN;Acc:ZDB-GENE-030131-9102]
56. rps9 ENSDARG00000011405, ENSDARG00000113248 366.53 2747.51 ribosomal protein S9 [Source:ZFIN;Acc:ZDB-GENE-010724-15]
57. tpm3 ENSDARG00000005162 352.43 2641.82 tropomyosin 3 [Source:ZFIN;Acc:ZDB-GENE-030826-16]
58. acta1b ENSDARG00000055618 338.33 2536.12 actin, alpha 1b, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-030131-55]
59. cyt1l ENSDARG00000036832 338.33 2536.12 type I cytokeratin, enveloping layer, like [Source:ZFIN;Acc:ZDB-GENE-061026-4]
60. mt-co1 ENSDARG00000063905 338.33 2536.12 cytochrome c oxidase I, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-14]
61. rps29 ENSDARG00000041232 338.33 2536.12 ribosomal protein S29 [Source:ZFIN;Acc:ZDB-GENE-040622-5]
62. rpl7 ENSDARG00000007320 324.24 2430.51 ribosomal protein L7 [Source:ZFIN;Acc:ZDB-GENE-030131-8654]
63. rps13 ENSDARG00000036298, ENSDARG00000112818 324.24 2430.51 ribosomal protein S13 [Source:ZFIN;Acc:ZDB-GENE-040625-52]
64. rps4x ENSDARG00000014690 324.24 2430.51 ribosomal protein S4 X-linked [Source:ZFIN;Acc:ZDB-GENE-040927-19]
65. aldoab ENSDARG00000034470 310.14 2324.81 aldolase a, fructose-bisphosphate, b [Source:ZFIN;Acc:ZDB-GENE-040426-2299]
66. npm1a ENSDARG00000014329, ENSDARG00000113199 310.14 2324.81 nucleophosmin 1a [Source:ZFIN;Acc:ZDB-GENE-021028-1]
67. rpl22 ENSDARG00000070437 310.14 2324.81 ribosomal protein L22 [Source:ZFIN;Acc:ZDB-GENE-051113-276]
68. acta1a ENSDARG00000036371 296.04 2219.12 actin, alpha 1a, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-050417-267]
69. fkbp1aa ENSDARG00000022684 296.04 2219.12 FK506 binding protein 1Aa [Source:ZFIN;Acc:ZDB-GENE-030131-7275]
70. hsp90aa1.1 ENSDARG00000010478 296.04 2219.12 heat shock protein 90, alpha (cytosolic), class A member 1, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-990415-94]
71. rpl18 ENSDARG00000029533 296.04 2219.12 ribosomal protein L18 [Source:ZFIN;Acc:ZDB-GENE-040801-165]
72. eef1g ENSDARG00000056119 281.95 2113.50 eukaryotic translation elongation factor 1 gamma [Source:ZFIN;Acc:ZDB-GENE-020423-3]
73. eif5a ENSDARG00000017235 281.95 2113.50 eukaryotic translation initiation factor 5A [Source:ZFIN;Acc:ZDB-GENE-040426-2229]
74. fabp3 ENSDARG00000023290 281.95 2113.50 fatty acid binding protein 3, muscle and heart [Source:ZFIN;Acc:ZDB-GENE-020318-2]
75. rpl35 ENSDARG00000018334 281.95 2113.50 ribosomal protein L35 [Source:ZFIN;Acc:ZDB-GENE-020419-2]
76. rpl36a ENSDARG00000058105, ENSDARG00000112656 281.95 2113.50 ribosomal protein L36A [Source:ZFIN;Acc:ZDB-GENE-020423-1]
77. rplp1 ENSDARG00000021864 281.95 2113.50 ribosomal protein, large, P1 [Source:ZFIN;Acc:ZDB-GENE-030131-8663]
78. si:dkeyp-86f7.3 si:dkeyp-86f7.3 281.95 2113.50
79. RPL37A RPL37A 267.85 2007.81
80. cfl1l ENSDARG00000012972 267.85 2007.81 cofilin 1 (non-muscle), like [Source:ZFIN;Acc:ZDB-GENE-040426-2770]
81. faua ENSDARG00000099022 267.85 2007.81 Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed a [Source:ZFIN;Acc:ZDB-GENE-040426-1700]
82. myhz2 ENSDARG00000012944 253.75 1902.11 myosin, heavy polypeptide 2, fast muscle specific [Source:ZFIN;Acc:ZDB-GENE-020604-1]
83. rpl5b ENSDARG00000015862, ENSDARG00000109661 253.75 1902.11 ribosomal protein L5b [Source:ZFIN;Acc:ZDB-GENE-040625-93]
84. rplp0 ENSDARG00000051783 253.75 1902.11 ribosomal protein, large, P0 [Source:ZFIN;Acc:ZDB-GENE-000629-1]
85. rps18 ENSDARG00000100392 253.75 1902.11 ribosomal protein S18 [Source:ZFIN;Acc:ZDB-GENE-020419-20]
86. rps7 ENSDARG00000042566 253.75 1902.11 ribosomal protein S7 [Source:ZFIN;Acc:ZDB-GENE-040426-1718]
87. tnnt2c ENSDARG00000032242 253.75 1902.11 troponin T2c, cardiac [Source:ZFIN;Acc:ZDB-GENE-030520-1]
88. RPL29 ENSDARG00000077717 239.65 1796.42 ribosomal protein L29 [Source:ZFIN;Acc:ZDB-GENE-040801-167]
89. rpl28 ENSDARG00000005791 239.65 1796.42 ribosomal protein L28 [Source:ZFIN;Acc:ZDB-GENE-040930-10]
90. rps14 ENSDARG00000036629 239.65 1796.42 ribosomal protein S14 [Source:ZFIN;Acc:ZDB-GENE-030131-8631]
91. rps5 ENSDARG00000043453 239.65 1796.42 ribosomal protein S5 [Source:ZFIN;Acc:ZDB-GENE-020419-12]
92. smyhc1 ENSDARG00000099959, ENSDARG00000115916 239.65 1796.42 slow myosin heavy chain 1 [Source:ZFIN;Acc:ZDB-GENE-030131-271]
93. ttna ttna 239.65 1796.42
94. RPS17L RPS17L 225.56 1690.80
95. cd81 cd81 225.56 1690.80
96. efemp2a ENSDARG00000094324 225.56 1690.80 EGF containing fibulin extracellular matrix protein 2a [Source:ZFIN;Acc:ZDB-GENE-041212-8]
97. hnrnpab hnrnpab 225.56 1690.80
98. rpl11 ENSDARG00000043509 225.56 1690.80 ribosomal protein L11 [Source:ZFIN;Acc:ZDB-GENE-040625-147]
99. rps10 ENSDARG00000034897 225.56 1690.80 ribosomal protein S10 [Source:ZFIN;Acc:ZDB-GENE-040426-1481]
100. rps16 ENSDARG00000045487 225.56 1690.80 ribosomal protein S16 [Source:ZFIN;Acc:ZDB-GENE-050506-107]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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