Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Zebrafish_28hpf_whole2, section s60.

Sample reads: 133,406. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. krt4 ENSDARG00000017624, ENSDARG00000115790 5753.94 43131.19 keratin 4 [Source:ZFIN;Acc:ZDB-GENE-000607-83]
2. AC024175.4 AC024175.4 5151.28 38613.68
3. tmsb4x ENSDARG00000077777 2482.37 18607.70 thymosin beta 4 X-linked [Source:ZFIN;Acc:ZDB-GENE-030131-8304]
4. mt-nd2 ENSDARG00000063899 1865.37 13982.70 NADH dehydrogenase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-8]
5. mt-co2 ENSDARG00000063908 1807.97 13552.43 cytochrome c oxidase II, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-15]
6. tpma ENSDARG00000033683 1650.13 12369.27 alpha-tropomyosin [Source:ZFIN;Acc:ZDB-GENE-990415-269]
7. mt-atp6 ENSDARG00000063911 1320.11 9895.46 ATP synthase 6, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-18]
8. ckmb ENSDARG00000040565 1234.01 9250.06 creatine kinase, muscle b [Source:ZFIN;Acc:ZDB-GENE-040426-2128]
9. mt-nd4 ENSDARG00000063917 1205.31 9034.93 NADH dehydrogenase 4, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-10]
10. mt-co3 ENSDARG00000063912 1133.57 8497.17 cytochrome c oxidase III, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-16]
11. mt-nd1 ENSDARG00000063895 1119.22 8389.61 NADH dehydrogenase 1, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-7]
12. si:dkey-151g10.6 si:dkey-151g10.6 918.33 6883.75
13. rpl10a ENSDARG00000042905, ENSDARG00000115649 846.59 6345.99 ribosomal protein L10a [Source:ZFIN;Acc:ZDB-GENE-030131-2025]
14. eef1a1l1 ENSDARG00000020850 832.24 6238.42 eukaryotic translation elongation factor 1 alpha 1, like 1 [Source:ZFIN;Acc:ZDB-GENE-990415-52]
15. actb1 ENSDARG00000037746, ENSDARG00000113649 774.84 5808.15 actin, beta 1 [Source:ZFIN;Acc:ZDB-GENE-000329-1]
16. myl10 ENSDARG00000062592 760.50 5700.66 myosin, light chain 10, regulatory [Source:ZFIN;Acc:ZDB-GENE-050417-421]
17. mt-cyb ENSDARG00000063924 717.45 5377.96 cytochrome b, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-17]
18. actb2 ENSDARG00000037870 660.05 4947.69 actin, beta 2 [Source:ZFIN;Acc:ZDB-GENE-000329-3]
19. ckma ENSDARG00000035327, ENSDARG00000114671 631.35 4732.56 creatine kinase, muscle a [Source:ZFIN;Acc:ZDB-GENE-980526-109]
20. ppiaa ENSDARG00000009212 631.35 4732.56 peptidylprolyl isomerase Aa (cyclophilin A) [Source:ZFIN;Acc:ZDB-GENE-030131-8556]
21. rpl8 ENSDARG00000014867 602.66 4517.50 ribosomal protein L8 [Source:ZFIN;Acc:ZDB-GENE-040426-1670]
22. hmga1a ENSDARG00000028335 573.96 4302.37 high mobility group AT-hook 1a [Source:ZFIN;Acc:ZDB-GENE-010502-1]
23. rpl18a ENSDARG00000025073 573.96 4302.37 ribosomal protein L18a [Source:ZFIN;Acc:ZDB-GENE-040426-1071]
24. rpl23 ENSDARG00000053457 573.96 4302.37 ribosomal protein L23 [Source:ZFIN;Acc:ZDB-GENE-030131-8756]
25. rpl26 ENSDARG00000102317 573.96 4302.37 ribosomal protein L26 [Source:ZFIN;Acc:ZDB-GENE-040426-2117]
26. zgc:92533 zgc:92533 573.96 4302.37
27. zgc:66286 zgc:66286 545.26 4087.24
28. hspa8 ENSDARG00000068992, ENSDARG00000114726 530.91 3979.67 heat shock protein 8 [Source:ZFIN;Acc:ZDB-GENE-990415-92]
29. rps23 ENSDARG00000021838 530.91 3979.67 ribosomal protein S23 [Source:ZFIN;Acc:ZDB-GENE-080220-50]
30. rpl21 ENSDARG00000010516, ENSDARG00000110263 502.21 3764.54 ribosomal protein L21 [Source:ZFIN;Acc:ZDB-GENE-030131-8512]
31. acta1a ENSDARG00000036371 487.87 3657.04 actin, alpha 1a, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-050417-267]
32. aldoab ENSDARG00000034470 487.87 3657.04 aldolase a, fructose-bisphosphate, b [Source:ZFIN;Acc:ZDB-GENE-040426-2299]
33. rps27a ENSDARG00000032725, ENSDARG00000114059 487.87 3657.04 ribosomal protein S27a [Source:ZFIN;Acc:ZDB-GENE-030131-10018]
34. mylz3 ENSDARG00000017441 473.52 3549.48 myosin, light polypeptide 3, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-000322-6]
35. rpl6 ENSDARG00000058451 473.52 3549.48 ribosomal protein L6 [Source:ZFIN;Acc:ZDB-GENE-030131-8671]
36. tnnc2 ENSDARG00000070835, ENSDARG00000111155 473.52 3549.48 troponin C type 2 (fast) [Source:ZFIN;Acc:ZDB-GENE-000322-2]
37. faua ENSDARG00000099022 459.17 3441.91 Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed a [Source:ZFIN;Acc:ZDB-GENE-040426-1700]
38. btf3 ENSDARG00000035400, ENSDARG00000116462 444.82 3334.34 basic transcription factor 3 [Source:ZFIN;Acc:ZDB-GENE-030131-8731]
39. rpl27 ENSDARG00000015128 444.82 3334.34 ribosomal protein L27 [Source:ZFIN;Acc:ZDB-GENE-030131-4343]
40. zgc:112425 zgc:112425 444.82 3334.34
41. col1a1a ENSDARG00000012405, ENSDARG00000116113 430.47 3226.78 collagen, type I, alpha 1a [Source:ZFIN;Acc:ZDB-GENE-030131-9102]
42. eef2b ENSDARG00000100371, ENSDARG00000109247 416.12 3119.21 eukaryotic translation elongation factor 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5128]
43. rpl11 ENSDARG00000043509 416.12 3119.21 ribosomal protein L11 [Source:ZFIN;Acc:ZDB-GENE-040625-147]
44. actc1b ENSDARG00000099197 401.77 3011.64 actin, alpha, cardiac muscle 1b [Source:ZFIN;Acc:ZDB-GENE-000322-1]
45. rpl7 ENSDARG00000007320 401.77 3011.64 ribosomal protein L7 [Source:ZFIN;Acc:ZDB-GENE-030131-8654]
46. mylpfa ENSDARG00000053254, ENSDARG00000112448, ENSDARG00000113256 387.42 2904.08 myosin light chain, phosphorylatable, fast skeletal muscle a [Source:ZFIN;Acc:ZDB-GENE-990712-15]
47. rpl36a ENSDARG00000058105, ENSDARG00000112656 387.42 2904.08 ribosomal protein L36A [Source:ZFIN;Acc:ZDB-GENE-020423-1]
48. rps15 ENSDARG00000070849, ENSDARG00000110979 387.42 2904.08 ribosomal protein S15 [Source:ZFIN;Acc:ZDB-GENE-030131-9092]
49. rps15a ENSDARG00000010160 387.42 2904.08 ribosomal protein S15a [Source:ZFIN;Acc:ZDB-GENE-030131-8708]
50. rps4x ENSDARG00000014690 387.42 2904.08 ribosomal protein S4 X-linked [Source:ZFIN;Acc:ZDB-GENE-040927-19]
51. tnni2b.1 ENSDARG00000035958 387.42 2904.08 troponin I type 2b (skeletal, fast), tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-050417-49]
52. RPL29 ENSDARG00000077717 373.07 2796.51 ribosomal protein L29 [Source:ZFIN;Acc:ZDB-GENE-040801-167]
53. rps26l ENSDARG00000030408 373.07 2796.51 ribosomal protein S26, like [Source:ZFIN;Acc:ZDB-GENE-040426-1706]
54. fabp3 ENSDARG00000023290 358.72 2688.94 fatty acid binding protein 3, muscle and heart [Source:ZFIN;Acc:ZDB-GENE-020318-2]
55. rps14 ENSDARG00000036629 358.72 2688.94 ribosomal protein S14 [Source:ZFIN;Acc:ZDB-GENE-030131-8631]
56. ttna ttna 358.72 2688.94
57. atp2a1 ENSDARG00000020574 344.38 2581.45 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 1 [Source:ZFIN;Acc:ZDB-GENE-020905-1]
58. cyt1l ENSDARG00000036832 344.38 2581.45 type I cytokeratin, enveloping layer, like [Source:ZFIN;Acc:ZDB-GENE-061026-4]
59. rplp2l ENSDARG00000011201 344.38 2581.45 ribosomal protein, large P2, like [Source:ZFIN;Acc:ZDB-GENE-070327-2]
60. si:ch1073-429i10.3 344.38 2581.45 si:ch1073-429i10.3, transcript variant X2
61. cfl1l ENSDARG00000012972 330.03 2473.88 cofilin 1 (non-muscle), like [Source:ZFIN;Acc:ZDB-GENE-040426-2770]
62. rps20 ENSDARG00000036044 330.03 2473.88 ribosomal protein S20 [Source:ZFIN;Acc:ZDB-GENE-040426-2284]
63. rps27.1 ENSDARG00000023298 330.03 2473.88 ribosomal protein S27, isoform 1 [Source:ZFIN;Acc:ZDB-GENE-050522-549]
64. rps9 ENSDARG00000011405, ENSDARG00000113248 330.03 2473.88 ribosomal protein S9 [Source:ZFIN;Acc:ZDB-GENE-010724-15]
65. hsp90aa1.1 ENSDARG00000010478 315.68 2366.32 heat shock protein 90, alpha (cytosolic), class A member 1, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-990415-94]
66. id1 ENSDARG00000040764 315.68 2366.32 inhibitor of DNA binding 1 [Source:ZFIN;Acc:ZDB-GENE-990415-96]
67. rpl19 ENSDARG00000013307 315.68 2366.32 ribosomal protein L19 [Source:ZFIN;Acc:ZDB-GENE-040426-2290]
68. rps12 ENSDARG00000036875, ENSDARG00000115157 315.68 2366.32 ribosomal protein S12 [Source:ZFIN;Acc:ZDB-GENE-030131-8951]
69. rps2 ENSDARG00000077291 315.68 2366.32 ribosomal protein S2 [Source:ZFIN;Acc:ZDB-GENE-040426-2454]
70. eif5a ENSDARG00000017235 301.33 2258.75 eukaryotic translation initiation factor 5A [Source:ZFIN;Acc:ZDB-GENE-040426-2229]
71. rpl15 ENSDARG00000009285 301.33 2258.75 ribosomal protein L15 [Source:ZFIN;Acc:ZDB-GENE-040801-183]
72. rpl36 ENSDARG00000100588 301.33 2258.75 ribosomal protein L36 [Source:ZFIN;Acc:ZDB-GENE-040622-2]
73. rplp1 ENSDARG00000021864 301.33 2258.75 ribosomal protein, large, P1 [Source:ZFIN;Acc:ZDB-GENE-030131-8663]
74. rps24 ENSDARG00000039347 301.33 2258.75 ribosomal protein S24 [Source:ZFIN;Acc:ZDB-GENE-040109-5]
75. hsp90ab1 ENSDARG00000029150 286.98 2151.18 heat shock protein 90, alpha (cytosolic), class B member 1 [Source:ZFIN;Acc:ZDB-GENE-990415-95]
76. myhz2 ENSDARG00000012944 286.98 2151.18 myosin, heavy polypeptide 2, fast muscle specific [Source:ZFIN;Acc:ZDB-GENE-020604-1]
77. pabpc1a ENSDARG00000017219 286.98 2151.18 poly(A) binding protein, cytoplasmic 1a [Source:ZFIN;Acc:ZDB-GENE-030131-3238]
78. rps29 ENSDARG00000041232 286.98 2151.18 ribosomal protein S29 [Source:ZFIN;Acc:ZDB-GENE-040622-5]
79. rps5 ENSDARG00000043453 286.98 2151.18 ribosomal protein S5 [Source:ZFIN;Acc:ZDB-GENE-020419-12]
80. zgc:113413 zgc:113413 286.98 2151.18
81. krt8 ENSDARG00000058358, ENSDARG00000109279 258.28 1936.05 keratin 8 [Source:ZFIN;Acc:ZDB-GENE-030411-5]
82. rpl23a ENSDARG00000006316 258.28 1936.05 ribosomal protein L23a [Source:ZFIN;Acc:ZDB-GENE-030131-7479]
83. smyhc1 ENSDARG00000099959, ENSDARG00000115916 258.28 1936.05 slow myosin heavy chain 1 [Source:ZFIN;Acc:ZDB-GENE-030131-271]
84. cirbp cirbp 243.93 1828.48
85. pfn1 ENSDARG00000088091 243.93 1828.48 profilin 1 [Source:ZFIN;Acc:ZDB-GENE-031002-33]
86. rpl28 ENSDARG00000005791 243.93 1828.48 ribosomal protein L28 [Source:ZFIN;Acc:ZDB-GENE-040930-10]
87. rps7 ENSDARG00000042566 243.93 1828.48 ribosomal protein S7 [Source:ZFIN;Acc:ZDB-GENE-040426-1718]
88. rpsa ENSDARG00000019181 243.93 1828.48 ribosomal protein SA [Source:ZFIN;Acc:ZDB-GENE-040426-811]
89. tnnt2c ENSDARG00000032242 243.93 1828.48 troponin T2c, cardiac [Source:ZFIN;Acc:ZDB-GENE-030520-1]
90. RPL37A RPL37A 229.58 1720.92
91. RPS17L RPS17L 229.58 1720.92
92. mt-co1 ENSDARG00000063905 229.58 1720.92 cytochrome c oxidase I, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-14]
93. tpm2 ENSDARG00000104682 229.58 1720.92 tropomyosin 2 (beta) [Source:ZFIN;Acc:ZDB-GENE-040625-114]
94. COX5B_1 ENSDARG00000015978 215.23 1613.35 cytochrome c oxidase subunit 5B [Source:HGNC Symbol;Acc:HGNC:2269]
95. col1a1b ENSDARG00000035809 215.23 1613.35 collagen, type I, alpha 1b [Source:ZFIN;Acc:ZDB-GENE-030131-4400]
96. rpl18 ENSDARG00000029533 215.23 1613.35 ribosomal protein L18 [Source:ZFIN;Acc:ZDB-GENE-040801-165]
97. rps19 ENSDARG00000030602 215.23 1613.35 ribosomal protein S19 [Source:ZFIN;Acc:ZDB-GENE-040426-1716]
98. tpm3 ENSDARG00000005162 215.23 1613.35 tropomyosin 3 [Source:ZFIN;Acc:ZDB-GENE-030826-16]
99. uba52 ENSDARG00000041435 215.23 1613.35 ubiquitin A-52 residue ribosomal protein fusion product 1 [Source:ZFIN;Acc:ZDB-GENE-051023-7]
100. cycsb ENSDARG00000044562 200.89 1505.86 cytochrome c, somatic b [Source:ZFIN;Acc:ZDB-GENE-040625-38]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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