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Experiment Zebrafish_28hpf_whole2, section s55.

Sample reads: 133,396. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. krt4 ENSDARG00000017624, ENSDARG00000115790 6790.69 50908.87 keratin 4 [Source:ZFIN;Acc:ZDB-GENE-000607-83]
2. tpma ENSDARG00000033683 3618.74 27129.20 alpha-tropomyosin [Source:ZFIN;Acc:ZDB-GENE-990415-269]
3. mt-nd4 ENSDARG00000063917 2373.84 17796.35 NADH dehydrogenase 4, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-10]
4. mt-co2 ENSDARG00000063908 2158.97 16185.50 cytochrome c oxidase II, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-15]
5. mt-nd2 ENSDARG00000063899 1879.29 14088.78 NADH dehydrogenase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-8]
6. AC024175.4 AC024175.4 1391.56 10432.33
7. tmsb4x ENSDARG00000077777 1210.80 9077.20 thymosin beta 4 X-linked [Source:ZFIN;Acc:ZDB-GENE-030131-8304]
8. actc1b ENSDARG00000099197 1200.56 9000.43 actin, alpha, cardiac muscle 1b [Source:ZFIN;Acc:ZDB-GENE-000322-1]
9. rps26l ENSDARG00000030408 1159.64 8693.66 ribosomal protein S26, like [Source:ZFIN;Acc:ZDB-GENE-040426-1706]
10. mt-atp6 ENSDARG00000063911 1132.35 8489.07 ATP synthase 6, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-18]
11. aldoab ENSDARG00000034470 1081.19 8105.53 aldolase a, fructose-bisphosphate, b [Source:ZFIN;Acc:ZDB-GENE-040426-2299]
12. ckma ENSDARG00000035327, ENSDARG00000114671 1064.14 7977.71 creatine kinase, muscle a [Source:ZFIN;Acc:ZDB-GENE-980526-109]
13. si:dkey-151g10.6 si:dkey-151g10.6 1033.44 7747.56
14. mt-co3 ENSDARG00000063912 1016.39 7619.74 cytochrome c oxidase III, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-16]
15. ckmb ENSDARG00000040565 944.76 7082.74 creatine kinase, muscle b [Source:ZFIN;Acc:ZDB-GENE-040426-2128]
16. actb2 ENSDARG00000037870 900.42 6750.33 actin, beta 2 [Source:ZFIN;Acc:ZDB-GENE-000329-3]
17. hbbe3 ENSDARG00000038147, ENSDARG00000109344 828.80 6213.40 hemoglobin beta embryonic-3 [Source:ZFIN;Acc:ZDB-GENE-980526-287]
18. atp2a1 ENSDARG00000020574 798.10 5983.25 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 1 [Source:ZFIN;Acc:ZDB-GENE-020905-1]
19. myhz1.3 ENSDARG00000067997 767.41 5753.17 myosin, heavy polypeptide 1.3, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-070705-74]
20. mt-nd1 ENSDARG00000063895 760.58 5701.96 NADH dehydrogenase 1, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-7]
21. tnnc2 ENSDARG00000070835, ENSDARG00000111155 712.83 5343.99 troponin C type 2 (fast) [Source:ZFIN;Acc:ZDB-GENE-000322-2]
22. mylpfa ENSDARG00000053254, ENSDARG00000112448, ENSDARG00000113256 675.32 5062.78 myosin light chain, phosphorylatable, fast skeletal muscle a [Source:ZFIN;Acc:ZDB-GENE-990712-15]
23. ppiaa ENSDARG00000009212 668.50 5011.65 peptidylprolyl isomerase Aa (cyclophilin A) [Source:ZFIN;Acc:ZDB-GENE-030131-8556]
24. eef1a1l1 ENSDARG00000020850 630.98 4730.37 eukaryotic translation elongation factor 1 alpha 1, like 1 [Source:ZFIN;Acc:ZDB-GENE-990415-52]
25. rps9 ENSDARG00000011405, ENSDARG00000113248 613.92 4602.47 ribosomal protein S9 [Source:ZFIN;Acc:ZDB-GENE-010724-15]
26. eef2b ENSDARG00000100371, ENSDARG00000109247 610.51 4576.91 eukaryotic translation elongation factor 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5128]
27. rpl18a ENSDARG00000025073 610.51 4576.91 ribosomal protein L18a [Source:ZFIN;Acc:ZDB-GENE-040426-1071]
28. rps23 ENSDARG00000021838 603.69 4525.78 ribosomal protein S23 [Source:ZFIN;Acc:ZDB-GENE-080220-50]
29. rpl36 ENSDARG00000100588 596.87 4474.65 ribosomal protein L36 [Source:ZFIN;Acc:ZDB-GENE-040622-2]
30. myl10 ENSDARG00000062592 579.82 4346.83 myosin, light chain 10, regulatory [Source:ZFIN;Acc:ZDB-GENE-050417-421]
31. rpl9 ENSDARG00000037350, ENSDARG00000112384 515.01 3860.96 ribosomal protein L9 [Source:ZFIN;Acc:ZDB-GENE-030131-8646]
32. rpl26 ENSDARG00000102317 511.60 3835.39 ribosomal protein L26 [Source:ZFIN;Acc:ZDB-GENE-040426-2117]
33. rpl10a ENSDARG00000042905, ENSDARG00000115649 508.19 3809.83 ribosomal protein L10a [Source:ZFIN;Acc:ZDB-GENE-030131-2025]
34. hbae3 ENSDARG00000079305 504.78 3784.27 hemoglobin alpha embryonic-3 [Source:ZFIN;Acc:ZDB-GENE-990706-3]
35. zgc:66286 zgc:66286 497.96 3733.14
36. myhz2 ENSDARG00000012944 494.55 3707.57 myosin, heavy polypeptide 2, fast muscle specific [Source:ZFIN;Acc:ZDB-GENE-020604-1]
37. rpl39 ENSDARG00000036316, ENSDARG00000117167 491.14 3682.01 ribosomal protein L39 [Source:ZFIN;Acc:ZDB-GENE-040625-51]
38. mt-cyb ENSDARG00000063924 463.85 3477.42 cytochrome b, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-17]
39. cyt1l ENSDARG00000036832 460.44 3451.86 type I cytokeratin, enveloping layer, like [Source:ZFIN;Acc:ZDB-GENE-061026-4]
40. zgc:112425 zgc:112425 450.21 3375.16
41. fabp3 ENSDARG00000023290 443.39 3324.03 fatty acid binding protein 3, muscle and heart [Source:ZFIN;Acc:ZDB-GENE-020318-2]
42. acta1a ENSDARG00000036371 436.57 3272.91 actin, alpha 1a, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-050417-267]
43. RPL29 ENSDARG00000077717 429.75 3221.78 ribosomal protein L29 [Source:ZFIN;Acc:ZDB-GENE-040801-167]
44. rps27a ENSDARG00000032725, ENSDARG00000114059 422.93 3170.65 ribosomal protein S27a [Source:ZFIN;Acc:ZDB-GENE-030131-10018]
45. rps14 ENSDARG00000036629 416.10 3119.44 ribosomal protein S14 [Source:ZFIN;Acc:ZDB-GENE-030131-8631]
46. hbbe1.1 ENSDARG00000113599 412.69 3093.88 hemoglobin beta embryonic-1.1 [Source:ZFIN;Acc:ZDB-GENE-030616-7]
47. smyhc1 ENSDARG00000099959, ENSDARG00000115916 409.28 3068.32 slow myosin heavy chain 1 [Source:ZFIN;Acc:ZDB-GENE-030131-271]
48. rpl19 ENSDARG00000013307 402.46 3017.19 ribosomal protein L19 [Source:ZFIN;Acc:ZDB-GENE-040426-2290]
49. rpl8 ENSDARG00000014867 402.46 3017.19 ribosomal protein L8 [Source:ZFIN;Acc:ZDB-GENE-040426-1670]
50. acta1b ENSDARG00000055618 388.82 2914.93 actin, alpha 1b, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-030131-55]
51. actb1 ENSDARG00000037746, ENSDARG00000113649 378.59 2838.24 actin, beta 1 [Source:ZFIN;Acc:ZDB-GENE-000329-1]
52. rpl27 ENSDARG00000015128 378.59 2838.24 ribosomal protein L27 [Source:ZFIN;Acc:ZDB-GENE-030131-4343]
53. faua ENSDARG00000099022 358.12 2684.78 Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed a [Source:ZFIN;Acc:ZDB-GENE-040426-1700]
54. rpl21 ENSDARG00000010516, ENSDARG00000110263 358.12 2684.78 ribosomal protein L21 [Source:ZFIN;Acc:ZDB-GENE-030131-8512]
55. tnni2a.4 ENSDARG00000029069 354.71 2659.21 troponin I type 2a (skeletal, fast), tandem duplicate 4 [Source:ZFIN;Acc:ZDB-GENE-040625-119]
56. si:ch211-226o13.2 327.43 2454.70 si:ch211-226o13.2
57. rps20 ENSDARG00000036044 324.02 2429.13 ribosomal protein S20 [Source:ZFIN;Acc:ZDB-GENE-040426-2284]
58. eif5a ENSDARG00000017235 317.19 2377.93 eukaryotic translation initiation factor 5A [Source:ZFIN;Acc:ZDB-GENE-040426-2229]
59. rps6 ENSDARG00000019778 313.78 2352.37 ribosomal protein S6 [Source:ZFIN;Acc:ZDB-GENE-040801-8]
60. ttna ttna 313.78 2352.37
61. hmga1a ENSDARG00000028335 310.37 2326.80 high mobility group AT-hook 1a [Source:ZFIN;Acc:ZDB-GENE-010502-1]
62. tnnt3b ENSDARG00000068457 310.37 2326.80 troponin T type 3b (skeletal, fast) [Source:ZFIN;Acc:ZDB-GENE-030520-2]
63. desma ENSDARG00000058656 303.55 2275.67 desmin a [Source:ZFIN;Acc:ZDB-GENE-980526-221]
64. hsp90aa1.1 ENSDARG00000010478 296.73 2224.54 heat shock protein 90, alpha (cytosolic), class A member 1, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-990415-94]
65. myl1 ENSDARG00000014196 296.73 2224.54 myosin, light chain 1, alkali; skeletal, fast [Source:ZFIN;Acc:ZDB-GENE-030131-8109]
66. rpl14 ENSDARG00000103433 296.73 2224.54 ribosomal protein L14 [Source:ZFIN;Acc:ZDB-GENE-030131-2085]
67. mylz3 ENSDARG00000017441 293.32 2198.98 myosin, light polypeptide 3, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-000322-6]
68. rpl36a ENSDARG00000058105, ENSDARG00000112656 293.32 2198.98 ribosomal protein L36A [Source:ZFIN;Acc:ZDB-GENE-020423-1]
69. rpl18 ENSDARG00000029533 289.91 2173.42 ribosomal protein L18 [Source:ZFIN;Acc:ZDB-GENE-040801-165]
70. rpl6 ENSDARG00000058451 289.91 2173.42 ribosomal protein L6 [Source:ZFIN;Acc:ZDB-GENE-030131-8671]
71. rps29 ENSDARG00000041232 289.91 2173.42 ribosomal protein S29 [Source:ZFIN;Acc:ZDB-GENE-040622-5]
72. rps2 ENSDARG00000077291 283.09 2122.29 ribosomal protein S2 [Source:ZFIN;Acc:ZDB-GENE-040426-2454]
73. krt8 ENSDARG00000058358, ENSDARG00000109279 279.68 2096.72 keratin 8 [Source:ZFIN;Acc:ZDB-GENE-030411-5]
74. tpm2 ENSDARG00000104682 279.68 2096.72 tropomyosin 2 (beta) [Source:ZFIN;Acc:ZDB-GENE-040625-114]
75. btf3 ENSDARG00000035400, ENSDARG00000116462 276.27 2071.16 basic transcription factor 3 [Source:ZFIN;Acc:ZDB-GENE-030131-8731]
76. rpl31 ENSDARG00000053365 276.27 2071.16 ribosomal protein L31 [Source:ZFIN;Acc:ZDB-GENE-060331-121]
77. rps10 ENSDARG00000034897 276.27 2071.16 ribosomal protein S10 [Source:ZFIN;Acc:ZDB-GENE-040426-1481]
78. rps27.1 ENSDARG00000023298 276.27 2071.16 ribosomal protein S27, isoform 1 [Source:ZFIN;Acc:ZDB-GENE-050522-549]
79. rps18 ENSDARG00000100392 272.86 2045.59 ribosomal protein S18 [Source:ZFIN;Acc:ZDB-GENE-020419-20]
80. hbae1_1 269.44 2019.95 hemoglobin, alpha embryonic 1
81. rpl23 ENSDARG00000053457 266.03 1994.39 ribosomal protein L23 [Source:ZFIN;Acc:ZDB-GENE-030131-8756]
82. rps13 ENSDARG00000036298, ENSDARG00000112818 262.62 1968.83 ribosomal protein S13 [Source:ZFIN;Acc:ZDB-GENE-040625-52]
83. rps15a ENSDARG00000010160 259.21 1943.26 ribosomal protein S15a [Source:ZFIN;Acc:ZDB-GENE-030131-8708]
84. ATP5B 255.80 1917.70 ATP synthase, H+ transporting, mitochondrial F1 complex, beta polypeptide
85. rpl28 ENSDARG00000005791 248.98 1866.57 ribosomal protein L28 [Source:ZFIN;Acc:ZDB-GENE-040930-10]
86. hspa8 ENSDARG00000068992, ENSDARG00000114726 235.34 1764.31 heat shock protein 8 [Source:ZFIN;Acc:ZDB-GENE-990415-92]
87. rps28 ENSDARG00000035860 231.93 1738.75 ribosomal protein S28 [Source:ZFIN;Acc:ZDB-GENE-030131-2022]
88. tnni2b.1 ENSDARG00000035958 228.52 1713.18 troponin I type 2b (skeletal, fast), tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-050417-49]
89. col1a1a ENSDARG00000012405, ENSDARG00000116113 225.11 1687.62 collagen, type I, alpha 1a [Source:ZFIN;Acc:ZDB-GENE-030131-9102]
90. atp5g3b 214.87 1610.85 ATP synthase, H+ transporting, mitochondrial F0 complex, subunit c3 (subunit 9) b, transcript variant X1
91. hnrnpa0l ENSDARG00000036161, ENSDARG00000076380, ENSDARG00000114889 214.87 1610.85 heterogeneous nuclear ribonucleoprotein A0, like [Source:ZFIN;Acc:ZDB-GENE-030131-618]
92. rpl30 ENSDARG00000035871, ENSDARG00000109253 214.87 1610.85 ribosomal protein L30 [Source:ZFIN;Acc:ZDB-GENE-030131-8657]
93. cox4i1 ENSDARG00000032970 211.46 1585.29 cytochrome c oxidase subunit 4I1 [Source:ZFIN;Acc:ZDB-GENE-030131-5175]
94. rplp1 ENSDARG00000021864 211.46 1585.29 ribosomal protein, large, P1 [Source:ZFIN;Acc:ZDB-GENE-030131-8663]
95. rps25 ENSDARG00000041811 211.46 1585.29 ribosomal protein S25 [Source:ZFIN;Acc:ZDB-GENE-040426-1788]
96. RPL37A RPL37A 208.05 1559.72
97. col1a1b ENSDARG00000035809 208.05 1559.72 collagen, type I, alpha 1b [Source:ZFIN;Acc:ZDB-GENE-030131-4400]
98. rbfox1l ENSDARG00000021184, ENSDARG00000111700 208.05 1559.72 RNA binding fox-1 homolog 1, like [Source:ZFIN;Acc:ZDB-GENE-040923-2]
99. rps15 ENSDARG00000070849, ENSDARG00000110979 208.05 1559.72 ribosomal protein S15 [Source:ZFIN;Acc:ZDB-GENE-030131-9092]
100. cfl1l ENSDARG00000012972 204.64 1534.16 cofilin 1 (non-muscle), like [Source:ZFIN;Acc:ZDB-GENE-040426-2770]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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