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Experiment Zebrafish_28hpf_whole2, section s52.

Sample reads: 133,393. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. AC024175.4 AC024175.4 7715.23 57838.91
2. krt4 ENSDARG00000017624, ENSDARG00000115790 3913.67 29339.69 keratin 4 [Source:ZFIN;Acc:ZDB-GENE-000607-83]
3. tpma ENSDARG00000033683 2198.54 16481.84 alpha-tropomyosin [Source:ZFIN;Acc:ZDB-GENE-990415-269]
4. mt-nd2 ENSDARG00000063899 1883.64 14121.12 NADH dehydrogenase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-8]
5. ckmb ENSDARG00000040565 1784.39 13377.07 creatine kinase, muscle b [Source:ZFIN;Acc:ZDB-GENE-040426-2128]
6. mt-co2 ENSDARG00000063908 1626.59 12194.09 cytochrome c oxidase II, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-15]
7. mt-nd4 ENSDARG00000063917 1503.77 11273.34 NADH dehydrogenase 4, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-10]
8. mt-atp6 ENSDARG00000063911 1495.20 11209.09 ATP synthase 6, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-18]
9. tmsb4x ENSDARG00000077777 1184.60 8880.61 thymosin beta 4 X-linked [Source:ZFIN;Acc:ZDB-GENE-030131-8304]
10. ckma ENSDARG00000035327, ENSDARG00000114671 1086.77 8147.21 creatine kinase, muscle a [Source:ZFIN;Acc:ZDB-GENE-980526-109]
11. mt-co3 ENSDARG00000063912 1034.65 7756.48 cytochrome c oxidase III, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-16]
12. atp2a1 ENSDARG00000020574 983.95 7376.40 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 1 [Source:ZFIN;Acc:ZDB-GENE-020905-1]
13. mt-nd1 ENSDARG00000063895 958.96 7189.05 NADH dehydrogenase 1, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-7]
14. actc1b ENSDARG00000099197 844.00 6327.23 actin, alpha, cardiac muscle 1b [Source:ZFIN;Acc:ZDB-GENE-000322-1]
15. mylpfa ENSDARG00000053254, ENSDARG00000112448, ENSDARG00000113256 820.43 6150.53 myosin light chain, phosphorylatable, fast skeletal muscle a [Source:ZFIN;Acc:ZDB-GENE-990712-15]
16. mylz3 ENSDARG00000017441 814.01 6102.40 myosin, light polypeptide 3, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-000322-6]
17. eef1a1l1 ENSDARG00000020850 776.88 5824.05 eukaryotic translation elongation factor 1 alpha 1, like 1 [Source:ZFIN;Acc:ZDB-GENE-990415-52]
18. actb2 ENSDARG00000037870 766.17 5743.76 actin, beta 2 [Source:ZFIN;Acc:ZDB-GENE-000329-3]
19. mt-cyb ENSDARG00000063924 738.32 5534.98 cytochrome b, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-17]
20. si:dkey-151g10.6 si:dkey-151g10.6 676.20 5069.28
21. tnnc2 ENSDARG00000070835, ENSDARG00000111155 666.20 4994.31 troponin C type 2 (fast) [Source:ZFIN;Acc:ZDB-GENE-000322-2]
22. ppiaa ENSDARG00000009212 664.77 4983.59 peptidylprolyl isomerase Aa (cyclophilin A) [Source:ZFIN;Acc:ZDB-GENE-030131-8556]
23. apoa1b ENSDARG00000101324 626.22 4694.60 apolipoprotein A-Ib [Source:ZFIN;Acc:ZDB-GENE-050302-172]
24. actb1 ENSDARG00000037746, ENSDARG00000113649 581.94 4362.64 actin, beta 1 [Source:ZFIN;Acc:ZDB-GENE-000329-1]
25. apoc1l apoc1l 554.10 4153.93
26. myhz1.3 ENSDARG00000067997 536.25 4020.12 myosin, heavy polypeptide 1.3, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-070705-74]
27. zgc:66286 zgc:66286 524.11 3929.11
28. apobb apobb 502.69 3768.53
29. apoa2 ENSDARG00000015866 497.69 3731.04 apolipoprotein A-II [Source:ZFIN;Acc:ZDB-GENE-030131-1046]
30. eef2b ENSDARG00000100371, ENSDARG00000109247 471.98 3538.30 eukaryotic translation elongation factor 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5128]
31. acta1b ENSDARG00000055618 471.27 3532.98 actin, alpha 1b, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-030131-55]
32. zgc:161979 zgc:161979 468.41 3511.54
33. zgc:112425 zgc:112425 467.70 3506.22
34. rpl10a ENSDARG00000042905, ENSDARG00000115649 460.56 3452.69 ribosomal protein L10a [Source:ZFIN;Acc:ZDB-GENE-030131-2025]
35. hspa8 ENSDARG00000068992, ENSDARG00000114726 436.99 3275.99 heat shock protein 8 [Source:ZFIN;Acc:ZDB-GENE-990415-92]
36. hmga1a ENSDARG00000028335 432.71 3243.91 high mobility group AT-hook 1a [Source:ZFIN;Acc:ZDB-GENE-010502-1]
37. zgc:92533 zgc:92533 416.29 3120.81
38. myl10 ENSDARG00000062592 408.43 3061.89 myosin, light chain 10, regulatory [Source:ZFIN;Acc:ZDB-GENE-050417-421]
39. btf3 ENSDARG00000035400, ENSDARG00000116462 394.87 2960.23 basic transcription factor 3 [Source:ZFIN;Acc:ZDB-GENE-030131-8731]
40. rpl18a ENSDARG00000025073 394.15 2954.83 ribosomal protein L18a [Source:ZFIN;Acc:ZDB-GENE-040426-1071]
41. aldoab ENSDARG00000034470 380.58 2853.10 aldolase a, fructose-bisphosphate, b [Source:ZFIN;Acc:ZDB-GENE-040426-2299]
42. rpl8 ENSDARG00000014867 377.01 2826.34 ribosomal protein L8 [Source:ZFIN;Acc:ZDB-GENE-040426-1670]
43. rpl23 ENSDARG00000053457 372.73 2794.25 ribosomal protein L23 [Source:ZFIN;Acc:ZDB-GENE-030131-8756]
44. apoeb ENSDARG00000040295 372.02 2788.93 apolipoprotein Eb [Source:ZFIN;Acc:ZDB-GENE-980526-368]
45. zgc:161979_1 zgc:161979_1 352.02 2639.00
46. acta1a ENSDARG00000036371 344.17 2580.15 actin, alpha 1a, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-050417-267]
47. eif5a ENSDARG00000017235 340.60 2553.38 eukaryotic translation initiation factor 5A [Source:ZFIN;Acc:ZDB-GENE-040426-2229]
48. myl1 ENSDARG00000014196 337.03 2526.62 myosin, light chain 1, alkali; skeletal, fast [Source:ZFIN;Acc:ZDB-GENE-030131-8109]
49. rps26l ENSDARG00000030408 332.74 2494.46 ribosomal protein S26, like [Source:ZFIN;Acc:ZDB-GENE-040426-1706]
50. mt-co1 ENSDARG00000063905 330.60 2478.42 cytochrome c oxidase I, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-14]
51. zgc:113413 zgc:113413 327.03 2451.65
52. fabp3 ENSDARG00000023290 324.18 2430.29 fatty acid binding protein 3, muscle and heart [Source:ZFIN;Acc:ZDB-GENE-020318-2]
53. tnni2b.1 ENSDARG00000035958 323.46 2424.89 troponin I type 2b (skeletal, fast), tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-050417-49]
54. tnnt3a ENSDARG00000030270 322.75 2419.57 troponin T type 3a (skeletal, fast) [Source:ZFIN;Acc:ZDB-GENE-000322-3]
55. rps23 ENSDARG00000021838 321.32 2408.85 ribosomal protein S23 [Source:ZFIN;Acc:ZDB-GENE-080220-50]
56. rpl26 ENSDARG00000102317 314.89 2360.64 ribosomal protein L26 [Source:ZFIN;Acc:ZDB-GENE-040426-2117]
57. rpl36a ENSDARG00000058105, ENSDARG00000112656 313.46 2349.92 ribosomal protein L36A [Source:ZFIN;Acc:ZDB-GENE-020423-1]
58. tpm3 ENSDARG00000005162 313.46 2349.92 tropomyosin 3 [Source:ZFIN;Acc:ZDB-GENE-030826-16]
59. rplp1 ENSDARG00000021864 294.19 2205.46 ribosomal protein, large, P1 [Source:ZFIN;Acc:ZDB-GENE-030131-8663]
60. rps27a ENSDARG00000032725, ENSDARG00000114059 293.47 2200.06 ribosomal protein S27a [Source:ZFIN;Acc:ZDB-GENE-030131-10018]
61. cyt1l ENSDARG00000036832 292.04 2189.34 type I cytokeratin, enveloping layer, like [Source:ZFIN;Acc:ZDB-GENE-061026-4]
62. myhz2 ENSDARG00000012944 287.76 2157.26 myosin, heavy polypeptide 2, fast muscle specific [Source:ZFIN;Acc:ZDB-GENE-020604-1]
63. rpl9 ENSDARG00000037350, ENSDARG00000112384 287.76 2157.26 ribosomal protein L9 [Source:ZFIN;Acc:ZDB-GENE-030131-8646]
64. rpl21 ENSDARG00000010516, ENSDARG00000110263 284.90 2135.82 ribosomal protein L21 [Source:ZFIN;Acc:ZDB-GENE-030131-8512]
65. pvalb2 ENSDARG00000002768, ENSDARG00000114085 283.47 2125.10 parvalbumin 2 [Source:ZFIN;Acc:ZDB-GENE-000322-4]
66. rpl19 ENSDARG00000013307 270.62 2028.76 ribosomal protein L19 [Source:ZFIN;Acc:ZDB-GENE-040426-2290]
67. ttna ttna 269.19 2018.04
68. rps14 ENSDARG00000036629 267.77 2007.40 ribosomal protein S14 [Source:ZFIN;Acc:ZDB-GENE-030131-8631]
69. col1a1a ENSDARG00000012405, ENSDARG00000116113 266.34 1996.68 collagen, type I, alpha 1a [Source:ZFIN;Acc:ZDB-GENE-030131-9102]
70. rpl27 ENSDARG00000015128 264.20 1980.63 ribosomal protein L27 [Source:ZFIN;Acc:ZDB-GENE-030131-4343]
71. rpl36 ENSDARG00000100588 254.91 1910.99 ribosomal protein L36 [Source:ZFIN;Acc:ZDB-GENE-040622-2]
72. rps9 ENSDARG00000011405, ENSDARG00000113248 254.20 1905.67 ribosomal protein S9 [Source:ZFIN;Acc:ZDB-GENE-010724-15]
73. rps20 ENSDARG00000036044 249.20 1868.18 ribosomal protein S20 [Source:ZFIN;Acc:ZDB-GENE-040426-2284]
74. cfl1l ENSDARG00000012972 244.92 1836.10 cofilin 1 (non-muscle), like [Source:ZFIN;Acc:ZDB-GENE-040426-2770]
75. rpl11 ENSDARG00000043509 244.20 1830.70 ribosomal protein L11 [Source:ZFIN;Acc:ZDB-GENE-040625-147]
76. rps2 ENSDARG00000077291 242.06 1814.66 ribosomal protein S2 [Source:ZFIN;Acc:ZDB-GENE-040426-2454]
77. hsp90aa1.1 ENSDARG00000010478 238.49 1787.89 heat shock protein 90, alpha (cytosolic), class A member 1, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-990415-94]
78. rps15 ENSDARG00000070849, ENSDARG00000110979 236.35 1771.85 ribosomal protein S15 [Source:ZFIN;Acc:ZDB-GENE-030131-9092]
79. zgc:153129 zgc:153129 232.06 1739.69
80. apoa1a ENSDARG00000012076, ENSDARG00000110395 229.21 1718.32 apolipoprotein A-Ia [Source:ZFIN;Acc:ZDB-GENE-990415-14]
81. si:ch211-226o13.2 226.35 1696.88 si:ch211-226o13.2
82. rpl7 ENSDARG00000007320 225.64 1691.56 ribosomal protein L7 [Source:ZFIN;Acc:ZDB-GENE-030131-8654]
83. rps5 ENSDARG00000043453 224.21 1680.84 ribosomal protein S5 [Source:ZFIN;Acc:ZDB-GENE-020419-12]
84. apoa4 apoa4 220.64 1654.08
85. rpl6 ENSDARG00000058451 216.35 1621.92 ribosomal protein L6 [Source:ZFIN;Acc:ZDB-GENE-030131-8671]
86. rplp0 ENSDARG00000051783 214.21 1605.87 ribosomal protein, large, P0 [Source:ZFIN;Acc:ZDB-GENE-000629-1]
87. atp5g3b 212.07 1589.83 ATP synthase, H+ transporting, mitochondrial F0 complex, subunit c3 (subunit 9) b, transcript variant X1
88. smyhc1 ENSDARG00000099959, ENSDARG00000115916 212.07 1589.83 slow myosin heavy chain 1 [Source:ZFIN;Acc:ZDB-GENE-030131-271]
89. ptmab ENSDARG00000101766 211.36 1584.51 prothymosin alpha b [Source:ZFIN;Acc:ZDB-GENE-030131-8681]
90. rpl18 ENSDARG00000029533 211.36 1584.51 ribosomal protein L18 [Source:ZFIN;Acc:ZDB-GENE-040801-165]
91. rpl15 ENSDARG00000009285 210.64 1579.11 ribosomal protein L15 [Source:ZFIN;Acc:ZDB-GENE-040801-183]
92. tnnt2c ENSDARG00000032242 209.93 1573.79 troponin T2c, cardiac [Source:ZFIN;Acc:ZDB-GENE-030520-1]
93. tnni2a.4 ENSDARG00000029069 204.93 1536.30 troponin I type 2a (skeletal, fast), tandem duplicate 4 [Source:ZFIN;Acc:ZDB-GENE-040625-119]
94. rps4x ENSDARG00000014690 204.22 1530.98 ribosomal protein S4 X-linked [Source:ZFIN;Acc:ZDB-GENE-040927-19]
95. rpl5b ENSDARG00000015862, ENSDARG00000109661 203.50 1525.58 ribosomal protein L5b [Source:ZFIN;Acc:ZDB-GENE-040625-93]
96. cirbp cirbp 197.79 1482.78
97. rps27.1 ENSDARG00000023298 194.93 1461.34 ribosomal protein S27, isoform 1 [Source:ZFIN;Acc:ZDB-GENE-050522-549]
98. rps6 ENSDARG00000019778 192.08 1439.97 ribosomal protein S6 [Source:ZFIN;Acc:ZDB-GENE-040801-8]
99. rps19 ENSDARG00000030602 189.94 1423.93 ribosomal protein S19 [Source:ZFIN;Acc:ZDB-GENE-040426-1716]
100. ATP5B 189.22 1418.53 ATP synthase, H+ transporting, mitochondrial F1 complex, beta polypeptide
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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