Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Zebrafish_28hpf_whole2, section s51.

Sample reads: 133,395. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. AC024175.4 AC024175.4 8025.55 60163.82
2. krt4 ENSDARG00000017624, ENSDARG00000115790 3534.92 26499.65 keratin 4 [Source:ZFIN;Acc:ZDB-GENE-000607-83]
3. tpma ENSDARG00000033683 2388.72 17907.12 alpha-tropomyosin [Source:ZFIN;Acc:ZDB-GENE-990415-269]
4. ckmb ENSDARG00000040565 1896.42 14216.58 creatine kinase, muscle b [Source:ZFIN;Acc:ZDB-GENE-040426-2128]
5. mt-nd2 ENSDARG00000063899 1846.12 13839.50 NADH dehydrogenase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-8]
6. mt-co2 ENSDARG00000063908 1670.61 12523.79 cytochrome c oxidase II, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-15]
7. mt-nd4 ENSDARG00000063917 1352.75 10140.94 NADH dehydrogenase 4, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-10]
8. mt-atp6 ENSDARG00000063911 1289.61 9667.61 ATP synthase 6, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-18]
9. tmsb4x ENSDARG00000077777 1271.42 9531.25 thymosin beta 4 X-linked [Source:ZFIN;Acc:ZDB-GENE-030131-8304]
10. ckma ENSDARG00000035327, ENSDARG00000114671 1222.19 9162.19 creatine kinase, muscle a [Source:ZFIN;Acc:ZDB-GENE-980526-109]
11. actc1b ENSDARG00000099197 1124.80 8432.10 actin, alpha, cardiac muscle 1b [Source:ZFIN;Acc:ZDB-GENE-000322-1]
12. atp2a1 ENSDARG00000020574 1095.90 8215.45 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 1 [Source:ZFIN;Acc:ZDB-GENE-020905-1]
13. mt-co3 ENSDARG00000063912 974.97 7308.90 cytochrome c oxidase III, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-16]
14. mylz3 ENSDARG00000017441 887.21 6651.00 myosin, light polypeptide 3, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-000322-6]
15. mylpfa ENSDARG00000053254, ENSDARG00000112448, ENSDARG00000113256 879.72 6594.85 myosin light chain, phosphorylatable, fast skeletal muscle a [Source:ZFIN;Acc:ZDB-GENE-990712-15]
16. eef1a1l1 ENSDARG00000020850 841.19 6306.01 eukaryotic translation elongation factor 1 alpha 1, like 1 [Source:ZFIN;Acc:ZDB-GENE-990415-52]
17. mt-nd1 ENSDARG00000063895 835.84 6265.90 NADH dehydrogenase 1, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-7]
18. tnnc2 ENSDARG00000070835, ENSDARG00000111155 754.50 5656.14 troponin C type 2 (fast) [Source:ZFIN;Acc:ZDB-GENE-000322-2]
19. myhz1.3 ENSDARG00000067997 744.87 5583.94 myosin, heavy polypeptide 1.3, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-070705-74]
20. actb2 ENSDARG00000037870 736.31 5519.77 actin, beta 2 [Source:ZFIN;Acc:ZDB-GENE-000329-3]
21. apoa1b ENSDARG00000101324 647.48 4853.86 apolipoprotein A-Ib [Source:ZFIN;Acc:ZDB-GENE-050302-172]
22. ppiaa ENSDARG00000009212 633.57 4749.58 peptidylprolyl isomerase Aa (cyclophilin A) [Source:ZFIN;Acc:ZDB-GENE-030131-8556]
23. mt-cyb ENSDARG00000063924 630.36 4725.52 cytochrome b, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-17]
24. si:dkey-151g10.6 si:dkey-151g10.6 593.97 4452.72
25. eef2b ENSDARG00000100371, ENSDARG00000109247 569.35 4268.15 eukaryotic translation elongation factor 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5128]
26. zgc:161979 zgc:161979 566.14 4244.09
27. apoa2 ENSDARG00000015866 559.72 4195.96 apolipoprotein A-II [Source:ZFIN;Acc:ZDB-GENE-030131-1046]
28. apoc1l apoc1l 551.16 4131.79
29. actb1 ENSDARG00000037746, ENSDARG00000113649 508.35 3810.86 actin, beta 1 [Source:ZFIN;Acc:ZDB-GENE-000329-1]
30. acta1b ENSDARG00000055618 507.28 3802.84 actin, alpha 1b, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-030131-55]
31. apobb apobb 504.07 3778.78
32. zgc:66286 zgc:66286 481.60 3610.33
33. myl1 ENSDARG00000014196 466.61 3497.96 myosin, light chain 1, alkali; skeletal, fast [Source:ZFIN;Acc:ZDB-GENE-030131-8109]
34. zgc:112425 zgc:112425 463.40 3473.89
35. zgc:161979_1 zgc:161979_1 456.98 3425.77
36. rpl23 ENSDARG00000053457 428.09 3209.19 ribosomal protein L23 [Source:ZFIN;Acc:ZDB-GENE-030131-8756]
37. apoeb ENSDARG00000040295 425.95 3193.15 apolipoprotein Eb [Source:ZFIN;Acc:ZDB-GENE-980526-368]
38. rpl8 ENSDARG00000014867 407.75 3056.71 ribosomal protein L8 [Source:ZFIN;Acc:ZDB-GENE-040426-1670]
39. tnnt3a ENSDARG00000030270 398.12 2984.52 troponin T type 3a (skeletal, fast) [Source:ZFIN;Acc:ZDB-GENE-000322-3]
40. aldoab ENSDARG00000034470 397.05 2976.50 aldolase a, fructose-bisphosphate, b [Source:ZFIN;Acc:ZDB-GENE-040426-2299]
41. mt-co1 ENSDARG00000063905 395.98 2968.48 cytochrome c oxidase I, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-14]
42. rpl10a ENSDARG00000042905, ENSDARG00000115649 382.07 2864.20 ribosomal protein L10a [Source:ZFIN;Acc:ZDB-GENE-030131-2025]
43. rpl18a ENSDARG00000025073 376.72 2824.09 ribosomal protein L18a [Source:ZFIN;Acc:ZDB-GENE-040426-1071]
44. hspa8 ENSDARG00000068992, ENSDARG00000114726 375.65 2816.07 heat shock protein 8 [Source:ZFIN;Acc:ZDB-GENE-990415-92]
45. acta1a ENSDARG00000036371 356.38 2671.62 actin, alpha 1a, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-050417-267]
46. hmga1a ENSDARG00000028335 355.31 2663.59 high mobility group AT-hook 1a [Source:ZFIN;Acc:ZDB-GENE-010502-1]
47. rpl26 ENSDARG00000102317 354.24 2655.57 ribosomal protein L26 [Source:ZFIN;Acc:ZDB-GENE-040426-2117]
48. rps27a ENSDARG00000032725, ENSDARG00000114059 339.26 2543.27 ribosomal protein S27a [Source:ZFIN;Acc:ZDB-GENE-030131-10018]
49. rps23 ENSDARG00000021838 337.12 2527.23 ribosomal protein S23 [Source:ZFIN;Acc:ZDB-GENE-080220-50]
50. btf3 ENSDARG00000035400, ENSDARG00000116462 330.70 2479.10 basic transcription factor 3 [Source:ZFIN;Acc:ZDB-GENE-030131-8731]
51. pvalb2 ENSDARG00000002768, ENSDARG00000114085 329.63 2471.08 parvalbumin 2 [Source:ZFIN;Acc:ZDB-GENE-000322-4]
52. rpl21 ENSDARG00000010516, ENSDARG00000110263 326.42 2447.02 ribosomal protein L21 [Source:ZFIN;Acc:ZDB-GENE-030131-8512]
53. myhz2 ENSDARG00000012944 318.92 2390.80 myosin, heavy polypeptide 2, fast muscle specific [Source:ZFIN;Acc:ZDB-GENE-020604-1]
54. eif5a ENSDARG00000017235 313.57 2350.69 eukaryotic translation initiation factor 5A [Source:ZFIN;Acc:ZDB-GENE-040426-2229]
55. tpm3 ENSDARG00000005162 308.22 2310.58 tropomyosin 3 [Source:ZFIN;Acc:ZDB-GENE-030826-16]
56. tnni2a.4 ENSDARG00000029069 299.66 2246.41 troponin I type 2a (skeletal, fast), tandem duplicate 4 [Source:ZFIN;Acc:ZDB-GENE-040625-119]
57. ttna ttna 298.59 2238.39
58. rpl9 ENSDARG00000037350, ENSDARG00000112384 295.38 2214.33 ribosomal protein L9 [Source:ZFIN;Acc:ZDB-GENE-030131-8646]
59. si:ch211-226o13.2 280.40 2102.03 si:ch211-226o13.2
60. myl10 ENSDARG00000062592 279.33 2094.01 myosin, light chain 10, regulatory [Source:ZFIN;Acc:ZDB-GENE-050417-421]
61. rpl19 ENSDARG00000013307 272.90 2045.80 ribosomal protein L19 [Source:ZFIN;Acc:ZDB-GENE-040426-2290]
62. rplp1 ENSDARG00000021864 269.69 2021.74 ribosomal protein, large, P1 [Source:ZFIN;Acc:ZDB-GENE-030131-8663]
63. zgc:113413 zgc:113413 269.69 2021.74
64. rpl36a ENSDARG00000058105, ENSDARG00000112656 266.48 1997.68 ribosomal protein L36A [Source:ZFIN;Acc:ZDB-GENE-020423-1]
65. rps20 ENSDARG00000036044 261.13 1957.57 ribosomal protein S20 [Source:ZFIN;Acc:ZDB-GENE-040426-2284]
66. rps26l ENSDARG00000030408 261.13 1957.57 ribosomal protein S26, like [Source:ZFIN;Acc:ZDB-GENE-040426-1706]
67. tnni2b.1 ENSDARG00000035958 261.13 1957.57 troponin I type 2b (skeletal, fast), tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-050417-49]
68. apoa4 apoa4 257.92 1933.51
69. rps2 ENSDARG00000077291 256.85 1925.49 ribosomal protein S2 [Source:ZFIN;Acc:ZDB-GENE-040426-2454]
70. zgc:92533 zgc:92533 255.78 1917.46
71. zgc:153129 zgc:153129 252.57 1893.40
72. hsp90aa1.1 ENSDARG00000010478 247.22 1853.29 heat shock protein 90, alpha (cytosolic), class A member 1, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-990415-94]
73. cyt1l ENSDARG00000036832 241.87 1813.19 type I cytokeratin, enveloping layer, like [Source:ZFIN;Acc:ZDB-GENE-061026-4]
74. rplp0 ENSDARG00000051783 236.52 1773.08 ribosomal protein, large, P0 [Source:ZFIN;Acc:ZDB-GENE-000629-1]
75. rbfox1l ENSDARG00000021184, ENSDARG00000111700 235.45 1765.06 RNA binding fox-1 homolog 1, like [Source:ZFIN;Acc:ZDB-GENE-040923-2]
76. rps14 ENSDARG00000036629 235.45 1765.06 ribosomal protein S14 [Source:ZFIN;Acc:ZDB-GENE-030131-8631]
77. rpl36 ENSDARG00000100588 233.31 1749.02 ribosomal protein L36 [Source:ZFIN;Acc:ZDB-GENE-040622-2]
78. rps9 ENSDARG00000011405, ENSDARG00000113248 226.89 1700.89 ribosomal protein S9 [Source:ZFIN;Acc:ZDB-GENE-010724-15]
79. col1a1a ENSDARG00000012405, ENSDARG00000116113 224.75 1684.85 collagen, type I, alpha 1a [Source:ZFIN;Acc:ZDB-GENE-030131-9102]
80. atp5g3b 223.68 1676.83 ATP synthase, H+ transporting, mitochondrial F0 complex, subunit c3 (subunit 9) b, transcript variant X1
81. rpl27 ENSDARG00000015128 221.53 1660.71 ribosomal protein L27 [Source:ZFIN;Acc:ZDB-GENE-030131-4343]
82. ATP5B 220.46 1652.69 ATP synthase, H+ transporting, mitochondrial F1 complex, beta polypeptide
83. rpsa ENSDARG00000019181 220.46 1652.69 ribosomal protein SA [Source:ZFIN;Acc:ZDB-GENE-040426-811]
84. rpl11 ENSDARG00000043509 219.39 1644.66 ribosomal protein L11 [Source:ZFIN;Acc:ZDB-GENE-040625-147]
85. rps12 ENSDARG00000036875, ENSDARG00000115157 216.18 1620.60 ribosomal protein S12 [Source:ZFIN;Acc:ZDB-GENE-030131-8951]
86. rpl6 ENSDARG00000058451 211.90 1588.52 ribosomal protein L6 [Source:ZFIN;Acc:ZDB-GENE-030131-8671]
87. rpl15 ENSDARG00000009285 210.83 1580.49 ribosomal protein L15 [Source:ZFIN;Acc:ZDB-GENE-040801-183]
88. rps27.1 ENSDARG00000023298 209.76 1572.47 ribosomal protein S27, isoform 1 [Source:ZFIN;Acc:ZDB-GENE-050522-549]
89. faua ENSDARG00000099022 204.41 1532.37 Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed a [Source:ZFIN;Acc:ZDB-GENE-040426-1700]
90. fabp3 ENSDARG00000023290 202.27 1516.32 fatty acid binding protein 3, muscle and heart [Source:ZFIN;Acc:ZDB-GENE-020318-2]
91. RPL29 ENSDARG00000077717 196.92 1476.22 ribosomal protein L29 [Source:ZFIN;Acc:ZDB-GENE-040801-167]
92. rbp4 ENSDARG00000101199 196.92 1476.22 retinol binding protein 4, plasma [Source:ZFIN;Acc:ZDB-GENE-000210-19]
93. rps15a ENSDARG00000010160 196.92 1476.22 ribosomal protein S15a [Source:ZFIN;Acc:ZDB-GENE-030131-8708]
94. col1a1b ENSDARG00000035809 195.85 1468.20 collagen, type I, alpha 1b [Source:ZFIN;Acc:ZDB-GENE-030131-4400]
95. fabp2 ENSDARG00000006427, ENSDARG00000110230 195.85 1468.20 fatty acid binding protein 2, intestinal [Source:ZFIN;Acc:ZDB-GENE-991019-5]
96. tnnt3b ENSDARG00000068457 194.78 1460.18 troponin T type 3b (skeletal, fast) [Source:ZFIN;Acc:ZDB-GENE-030520-2]
97. rps19 ENSDARG00000030602 192.64 1444.13 ribosomal protein S19 [Source:ZFIN;Acc:ZDB-GENE-040426-1716]
98. cfl1l ENSDARG00000012972 188.36 1412.05 cofilin 1 (non-muscle), like [Source:ZFIN;Acc:ZDB-GENE-040426-2770]
99. bhmt ENSDARG00000013430 187.29 1404.03 betaine-homocysteine methyltransferase [Source:ZFIN;Acc:ZDB-GENE-030131-947]
100. cirbp cirbp 186.22 1396.00
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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