Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Zebrafish_28hpf_whole2, section s49.

Sample reads: 133,390. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. AC024175.4 AC024175.4 7695.96 57695.11
2. krt4 ENSDARG00000017624, ENSDARG00000115790 3534.84 26500.00 keratin 4 [Source:ZFIN;Acc:ZDB-GENE-000607-83]
3. tpma ENSDARG00000033683 2446.82 18343.33 alpha-tropomyosin [Source:ZFIN;Acc:ZDB-GENE-990415-269]
4. ckmb ENSDARG00000040565 2005.23 15032.82 creatine kinase, muscle b [Source:ZFIN;Acc:ZDB-GENE-040426-2128]
5. mt-nd2 ENSDARG00000063899 1782.35 13361.93 NADH dehydrogenase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-8]
6. ckma ENSDARG00000035327, ENSDARG00000114671 1394.22 10452.19 creatine kinase, muscle a [Source:ZFIN;Acc:ZDB-GENE-980526-109]
7. mt-co2 ENSDARG00000063908 1374.77 10306.38 cytochrome c oxidase II, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-15]
8. mt-nd4 ENSDARG00000063917 1294.23 9702.59 NADH dehydrogenase 4, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-10]
9. actc1b ENSDARG00000099197 1252.57 9390.27 actin, alpha, cardiac muscle 1b [Source:ZFIN;Acc:ZDB-GENE-000322-1]
10. mt-atp6 ENSDARG00000063911 1194.25 8953.06 ATP synthase 6, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-18]
11. atp2a1 ENSDARG00000020574 1181.75 8859.35 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 1 [Source:ZFIN;Acc:ZDB-GENE-020905-1]
12. tmsb4x ENSDARG00000077777 1075.52 8062.96 thymosin beta 4 X-linked [Source:ZFIN;Acc:ZDB-GENE-030131-8304]
13. mt-co3 ENSDARG00000063912 939.43 7042.72 cytochrome c oxidase III, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-16]
14. mylz3 ENSDARG00000017441 900.55 6751.25 myosin, light polypeptide 3, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-000322-6]
15. mt-nd1 ENSDARG00000063895 864.44 6480.54 NADH dehydrogenase 1, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-7]
16. actb2 ENSDARG00000037870 845.69 6339.97 actin, beta 2 [Source:ZFIN;Acc:ZDB-GENE-000329-3]
17. mylpfa ENSDARG00000053254, ENSDARG00000112448, ENSDARG00000113256 839.45 6293.19 myosin light chain, phosphorylatable, fast skeletal muscle a [Source:ZFIN;Acc:ZDB-GENE-990712-15]
18. myhz1.3 ENSDARG00000067997 780.43 5850.73 myosin, heavy polypeptide 1.3, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-070705-74]
19. eef1a1l1 ENSDARG00000020850 770.01 5772.61 eukaryotic translation elongation factor 1 alpha 1, like 1 [Source:ZFIN;Acc:ZDB-GENE-990415-52]
20. apoa1b ENSDARG00000101324 738.07 5533.17 apolipoprotein A-Ib [Source:ZFIN;Acc:ZDB-GENE-050302-172]
21. si:dkey-151g10.6 si:dkey-151g10.6 693.64 5200.08
22. ppiaa ENSDARG00000009212 635.31 4762.79 peptidylprolyl isomerase Aa (cyclophilin A) [Source:ZFIN;Acc:ZDB-GENE-030131-8556]
23. tnnc2 ENSDARG00000070835, ENSDARG00000111155 617.95 4632.65 troponin C type 2 (fast) [Source:ZFIN;Acc:ZDB-GENE-000322-2]
24. apoc1l apoc1l 609.62 4570.20
25. zgc:161979 zgc:161979 592.26 4440.06
26. mt-cyb ENSDARG00000063924 585.32 4388.03 cytochrome b, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-17]
27. actb1 ENSDARG00000037746, ENSDARG00000113649 569.35 4268.31 actin, beta 1 [Source:ZFIN;Acc:ZDB-GENE-000329-1]
28. apoeb ENSDARG00000040295 563.10 4221.45 apolipoprotein Eb [Source:ZFIN;Acc:ZDB-GENE-980526-368]
29. zgc:161979_1 zgc:161979_1 561.02 4205.86
30. eef2b ENSDARG00000100371, ENSDARG00000109247 558.24 4185.02 eukaryotic translation elongation factor 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5128]
31. apoa2 ENSDARG00000015866 529.08 3966.41 apolipoprotein A-II [Source:ZFIN;Acc:ZDB-GENE-030131-1046]
32. apobb apobb 527.69 3955.99
33. hmga1a ENSDARG00000028335 474.92 3560.38 high mobility group AT-hook 1a [Source:ZFIN;Acc:ZDB-GENE-010502-1]
34. acta1b ENSDARG00000055618 453.40 3399.05 actin, alpha 1b, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-030131-55]
35. myl1 ENSDARG00000014196 447.15 3352.20 myosin, light chain 1, alkali; skeletal, fast [Source:ZFIN;Acc:ZDB-GENE-030131-8109]
36. zgc:66286 zgc:66286 434.65 3258.49
37. zgc:112425 zgc:112425 431.87 3237.64
38. mt-co1 ENSDARG00000063905 425.62 3190.79 cytochrome c oxidase I, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-14]
39. hspa8 ENSDARG00000068992, ENSDARG00000114726 417.99 3133.59 heat shock protein 8 [Source:ZFIN;Acc:ZDB-GENE-990415-92]
40. rpl10a ENSDARG00000042905, ENSDARG00000115649 402.71 3019.04 ribosomal protein L10a [Source:ZFIN;Acc:ZDB-GENE-030131-2025]
41. pvalb2 ENSDARG00000002768, ENSDARG00000114085 397.85 2982.60 parvalbumin 2 [Source:ZFIN;Acc:ZDB-GENE-000322-4]
42. rpl8 ENSDARG00000014867 387.44 2904.56 ribosomal protein L8 [Source:ZFIN;Acc:ZDB-GENE-040426-1670]
43. aldoab ENSDARG00000034470 380.49 2852.46 aldolase a, fructose-bisphosphate, b [Source:ZFIN;Acc:ZDB-GENE-040426-2299]
44. rpl23 ENSDARG00000053457 349.25 2618.26 ribosomal protein L23 [Source:ZFIN;Acc:ZDB-GENE-030131-8756]
45. zgc:92533 zgc:92533 347.17 2602.67
46. btf3 ENSDARG00000035400, ENSDARG00000116462 346.47 2597.42 basic transcription factor 3 [Source:ZFIN;Acc:ZDB-GENE-030131-8731]
47. rpl26 ENSDARG00000102317 343.69 2576.58 ribosomal protein L26 [Source:ZFIN;Acc:ZDB-GENE-040426-2117]
48. eif5a ENSDARG00000017235 334.67 2508.96 eukaryotic translation initiation factor 5A [Source:ZFIN;Acc:ZDB-GENE-040426-2229]
49. rps27a ENSDARG00000032725, ENSDARG00000114059 333.97 2503.71 ribosomal protein S27a [Source:ZFIN;Acc:ZDB-GENE-030131-10018]
50. tnnt3a ENSDARG00000030270 326.34 2446.51 troponin T type 3a (skeletal, fast) [Source:ZFIN;Acc:ZDB-GENE-000322-3]
51. tpm3 ENSDARG00000005162 324.25 2430.84 tropomyosin 3 [Source:ZFIN;Acc:ZDB-GENE-030826-16]
52. myl10 ENSDARG00000062592 320.78 2404.82 myosin, light chain 10, regulatory [Source:ZFIN;Acc:ZDB-GENE-050417-421]
53. si:ch211-226o13.2 315.92 2368.39 si:ch211-226o13.2
54. rpl21 ENSDARG00000010516, ENSDARG00000110263 308.28 2311.11 ribosomal protein L21 [Source:ZFIN;Acc:ZDB-GENE-030131-8512]
55. rpl18a ENSDARG00000025073 305.51 2290.35 ribosomal protein L18a [Source:ZFIN;Acc:ZDB-GENE-040426-1071]
56. ttna ttna 304.12 2279.93
57. acta1a ENSDARG00000036371 303.42 2274.68 actin, alpha 1a, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-050417-267]
58. rplp1 ENSDARG00000021864 299.26 2243.49 ribosomal protein, large, P1 [Source:ZFIN;Acc:ZDB-GENE-030131-8663]
59. rpl9 ENSDARG00000037350, ENSDARG00000112384 294.40 2207.06 ribosomal protein L9 [Source:ZFIN;Acc:ZDB-GENE-030131-8646]
60. rpl36a ENSDARG00000058105, ENSDARG00000112656 285.37 2139.36 ribosomal protein L36A [Source:ZFIN;Acc:ZDB-GENE-020423-1]
61. apoa4 apoa4 283.98 2128.94
62. rps23 ENSDARG00000021838 279.82 2097.76 ribosomal protein S23 [Source:ZFIN;Acc:ZDB-GENE-080220-50]
63. tnni2b.1 ENSDARG00000035958 279.82 2097.76 troponin I type 2b (skeletal, fast), tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-050417-49]
64. tnni2a.4 ENSDARG00000029069 279.12 2092.51 troponin I type 2a (skeletal, fast), tandem duplicate 4 [Source:ZFIN;Acc:ZDB-GENE-040625-119]
65. rps14 ENSDARG00000036629 274.26 2056.07 ribosomal protein S14 [Source:ZFIN;Acc:ZDB-GENE-030131-8631]
66. myhz2 ENSDARG00000012944 265.93 1993.63 myosin, heavy polypeptide 2, fast muscle specific [Source:ZFIN;Acc:ZDB-GENE-020604-1]
67. apoa1a ENSDARG00000012076, ENSDARG00000110395 264.54 1983.20 apolipoprotein A-Ia [Source:ZFIN;Acc:ZDB-GENE-990415-14]
68. fabp3 ENSDARG00000023290 263.85 1978.03 fatty acid binding protein 3, muscle and heart [Source:ZFIN;Acc:ZDB-GENE-020318-2]
69. zgc:153129 zgc:153129 261.07 1957.19
70. cyt1l ENSDARG00000036832 250.65 1879.07 type I cytokeratin, enveloping layer, like [Source:ZFIN;Acc:ZDB-GENE-061026-4]
71. rps2 ENSDARG00000077291 236.07 1769.77 ribosomal protein S2 [Source:ZFIN;Acc:ZDB-GENE-040426-2454]
72. rps20 ENSDARG00000036044 233.99 1754.18 ribosomal protein S20 [Source:ZFIN;Acc:ZDB-GENE-040426-2284]
73. rps26l ENSDARG00000030408 231.21 1733.34 ribosomal protein S26, like [Source:ZFIN;Acc:ZDB-GENE-040426-1706]
74. rplp0 ENSDARG00000051783 230.52 1728.16 ribosomal protein, large, P0 [Source:ZFIN;Acc:ZDB-GENE-000629-1]
75. rps9 ENSDARG00000011405, ENSDARG00000113248 227.74 1707.32 ribosomal protein S9 [Source:ZFIN;Acc:ZDB-GENE-010724-15]
76. rpl19 ENSDARG00000013307 224.27 1681.31 ribosomal protein L19 [Source:ZFIN;Acc:ZDB-GENE-040426-2290]
77. cfl1l ENSDARG00000012972 222.88 1670.89 cofilin 1 (non-muscle), like [Source:ZFIN;Acc:ZDB-GENE-040426-2770]
78. rpl27 ENSDARG00000015128 221.49 1660.47 ribosomal protein L27 [Source:ZFIN;Acc:ZDB-GENE-030131-4343]
79. rpl18 ENSDARG00000029533 219.41 1644.87 ribosomal protein L18 [Source:ZFIN;Acc:ZDB-GENE-040801-165]
80. rpsa ENSDARG00000019181 219.41 1644.87 ribosomal protein SA [Source:ZFIN;Acc:ZDB-GENE-040426-811]
81. zgc:113413 zgc:113413 217.33 1629.28
82. ptmab ENSDARG00000101766 215.94 1618.86 prothymosin alpha b [Source:ZFIN;Acc:ZDB-GENE-030131-8681]
83. rpl11 ENSDARG00000043509 213.85 1603.19 ribosomal protein L11 [Source:ZFIN;Acc:ZDB-GENE-040625-147]
84. rpl36 ENSDARG00000100588 209.69 1572.00 ribosomal protein L36 [Source:ZFIN;Acc:ZDB-GENE-040622-2]
85. ATP5B 207.60 1556.34 ATP synthase, H+ transporting, mitochondrial F1 complex, beta polypeptide
86. rps12 ENSDARG00000036875, ENSDARG00000115157 205.52 1540.74 ribosomal protein S12 [Source:ZFIN;Acc:ZDB-GENE-030131-8951]
87. col1a1a ENSDARG00000012405, ENSDARG00000116113 197.88 1483.47 collagen, type I, alpha 1a [Source:ZFIN;Acc:ZDB-GENE-030131-9102]
88. tnnt3b ENSDARG00000068457 197.88 1483.47 troponin T type 3b (skeletal, fast) [Source:ZFIN;Acc:ZDB-GENE-030520-2]
89. rpl15 ENSDARG00000009285 197.19 1478.29 ribosomal protein L15 [Source:ZFIN;Acc:ZDB-GENE-040801-183]
90. rps4x ENSDARG00000014690 197.19 1478.29 ribosomal protein S4 X-linked [Source:ZFIN;Acc:ZDB-GENE-040927-19]
91. rps15a ENSDARG00000010160 194.41 1457.45 ribosomal protein S15a [Source:ZFIN;Acc:ZDB-GENE-030131-8708]
92. rps5 ENSDARG00000043453 194.41 1457.45 ribosomal protein S5 [Source:ZFIN;Acc:ZDB-GENE-020419-12]
93. hsp90aa1.1 ENSDARG00000010478 193.72 1452.28 heat shock protein 90, alpha (cytosolic), class A member 1, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-990415-94]
94. rps15 ENSDARG00000070849, ENSDARG00000110979 191.64 1436.69 ribosomal protein S15 [Source:ZFIN;Acc:ZDB-GENE-030131-9092]
95. rbfox1l ENSDARG00000021184, ENSDARG00000111700 190.94 1431.44 RNA binding fox-1 homolog 1, like [Source:ZFIN;Acc:ZDB-GENE-040923-2]
96. rps19 ENSDARG00000030602 190.25 1426.27 ribosomal protein S19 [Source:ZFIN;Acc:ZDB-GENE-040426-1716]
97. gapdh ENSDARG00000043457 188.16 1410.60 glyceraldehyde-3-phosphate dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-030115-1]
98. atp5g3b 184.69 1384.58 ATP synthase, H+ transporting, mitochondrial F0 complex, subunit c3 (subunit 9) b, transcript variant X1
99. rpl7 ENSDARG00000007320 181.91 1363.74 ribosomal protein L7 [Source:ZFIN;Acc:ZDB-GENE-030131-8654]
100. fabp2 ENSDARG00000006427, ENSDARG00000110230 181.22 1358.57 fatty acid binding protein 2, intestinal [Source:ZFIN;Acc:ZDB-GENE-991019-5]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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