Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Zebrafish_28hpf_whole2, section s47.

Sample reads: 133,408. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. AC024175.4 AC024175.4 4798.31 35967.29
2. krt4 ENSDARG00000017624, ENSDARG00000115790 3216.45 24109.94 keratin 4 [Source:ZFIN;Acc:ZDB-GENE-000607-83]
3. tpma ENSDARG00000033683 2587.66 19396.64 alpha-tropomyosin [Source:ZFIN;Acc:ZDB-GENE-990415-269]
4. mt-nd2 ENSDARG00000063899 2180.33 16343.37 NADH dehydrogenase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-8]
5. ckmb ENSDARG00000040565 1715.00 12855.34 creatine kinase, muscle b [Source:ZFIN;Acc:ZDB-GENE-040426-2128]
6. mt-co2 ENSDARG00000063908 1649.09 12361.29 cytochrome c oxidase II, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-15]
7. mt-nd4 ENSDARG00000063917 1518.59 11383.08 NADH dehydrogenase 4, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-10]
8. ckma ENSDARG00000035327, ENSDARG00000114671 1219.35 9140.03 creatine kinase, muscle a [Source:ZFIN;Acc:ZDB-GENE-980526-109]
9. actc1b ENSDARG00000099197 1128.39 8458.21 actin, alpha, cardiac muscle 1b [Source:ZFIN;Acc:ZDB-GENE-000322-1]
10. tmsb4x ENSDARG00000077777 1128.39 8458.21 thymosin beta 4 X-linked [Source:ZFIN;Acc:ZDB-GENE-030131-8304]
11. mt-atp6 ENSDARG00000063911 1075.67 8063.03 ATP synthase 6, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-18]
12. mt-nd1 ENSDARG00000063895 1018.98 7638.09 NADH dehydrogenase 1, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-7]
13. atp2a1 ENSDARG00000020574 988.66 7410.82 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 1 [Source:ZFIN;Acc:ZDB-GENE-020905-1]
14. mylpfa ENSDARG00000053254, ENSDARG00000112448, ENSDARG00000113256 988.66 7410.82 myosin light chain, phosphorylatable, fast skeletal muscle a [Source:ZFIN;Acc:ZDB-GENE-990712-15]
15. mt-co3 ENSDARG00000063912 982.07 7361.42 cytochrome c oxidase III, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-16]
16. mylz3 ENSDARG00000017441 935.94 7015.64 myosin, light polypeptide 3, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-000322-6]
17. eef1a1l1 ENSDARG00000020850 910.89 6827.87 eukaryotic translation elongation factor 1 alpha 1, like 1 [Source:ZFIN;Acc:ZDB-GENE-990415-52]
18. si:dkey-151g10.6 si:dkey-151g10.6 884.52 6630.21
19. tnnc2 ENSDARG00000070835, ENSDARG00000111155 806.75 6047.26 troponin C type 2 (fast) [Source:ZFIN;Acc:ZDB-GENE-000322-2]
20. mt-cyb ENSDARG00000063924 757.98 5681.68 cytochrome b, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-17]
21. apoa1b ENSDARG00000101324 706.57 5296.32 apolipoprotein A-Ib [Source:ZFIN;Acc:ZDB-GENE-050302-172]
22. actb2 ENSDARG00000037870 705.25 5286.43 actin, beta 2 [Source:ZFIN;Acc:ZDB-GENE-000329-3]
23. ppiaa ENSDARG00000009212 693.38 5197.45 peptidylprolyl isomerase Aa (cyclophilin A) [Source:ZFIN;Acc:ZDB-GENE-030131-8556]
24. myhz1.3 ENSDARG00000067997 685.47 5138.16 myosin, heavy polypeptide 1.3, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-070705-74]
25. acta1b ENSDARG00000055618 661.75 4960.36 actin, alpha 1b, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-030131-55]
26. zgc:161979_1 zgc:161979_1 638.02 4782.49
27. pvalb2 ENSDARG00000002768, ENSDARG00000114085 615.61 4614.50 parvalbumin 2 [Source:ZFIN;Acc:ZDB-GENE-000322-4]
28. apoa2 ENSDARG00000015866 574.74 4308.15 apolipoprotein A-II [Source:ZFIN;Acc:ZDB-GENE-030131-1046]
29. apobb apobb 572.11 4288.44
30. actb1 ENSDARG00000037746, ENSDARG00000113649 540.47 4051.27 actin, beta 1 [Source:ZFIN;Acc:ZDB-GENE-000329-1]
31. apoc1l apoc1l 522.01 3912.89
32. rpl10a ENSDARG00000042905, ENSDARG00000115649 512.79 3843.78 ribosomal protein L10a [Source:ZFIN;Acc:ZDB-GENE-030131-2025]
33. rpl8 ENSDARG00000014867 506.20 3794.39 ribosomal protein L8 [Source:ZFIN;Acc:ZDB-GENE-040426-1670]
34. hmga1a ENSDARG00000028335 499.60 3744.91 high mobility group AT-hook 1a [Source:ZFIN;Acc:ZDB-GENE-010502-1]
35. apoeb ENSDARG00000040295 490.38 3675.80 apolipoprotein Eb [Source:ZFIN;Acc:ZDB-GENE-980526-368]
36. rpl23 ENSDARG00000053457 485.10 3636.22 ribosomal protein L23 [Source:ZFIN;Acc:ZDB-GENE-030131-8756]
37. zgc:161979 zgc:161979 473.24 3547.32
38. tnni2a.4 ENSDARG00000029069 471.92 3537.43 troponin I type 2a (skeletal, fast), tandem duplicate 4 [Source:ZFIN;Acc:ZDB-GENE-040625-119]
39. eef2b ENSDARG00000100371, ENSDARG00000109247 456.10 3418.85 eukaryotic translation elongation factor 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5128]
40. aldoab ENSDARG00000034470 450.83 3379.34 aldolase a, fructose-bisphosphate, b [Source:ZFIN;Acc:ZDB-GENE-040426-2299]
41. hspa8 ENSDARG00000068992, ENSDARG00000114726 444.24 3329.94 heat shock protein 8 [Source:ZFIN;Acc:ZDB-GENE-990415-92]
42. zgc:112425 zgc:112425 441.60 3310.16
43. zgc:92533 zgc:92533 421.83 3161.96
44. acta1a ENSDARG00000036371 404.69 3033.48 actin, alpha 1a, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-050417-267]
45. myl1 ENSDARG00000014196 404.69 3033.48 myosin, light chain 1, alkali; skeletal, fast [Source:ZFIN;Acc:ZDB-GENE-030131-8109]
46. rps27a ENSDARG00000032725, ENSDARG00000114059 402.06 3013.77 ribosomal protein S27a [Source:ZFIN;Acc:ZDB-GENE-030131-10018]
47. tnnt3a ENSDARG00000030270 388.87 2914.90 troponin T type 3a (skeletal, fast) [Source:ZFIN;Acc:ZDB-GENE-000322-3]
48. rpl18a ENSDARG00000025073 386.24 2895.19 ribosomal protein L18a [Source:ZFIN;Acc:ZDB-GENE-040426-1071]
49. btf3 ENSDARG00000035400, ENSDARG00000116462 379.65 2845.79 basic transcription factor 3 [Source:ZFIN;Acc:ZDB-GENE-030131-8731]
50. rpl36a ENSDARG00000058105, ENSDARG00000112656 378.33 2835.89 ribosomal protein L36A [Source:ZFIN;Acc:ZDB-GENE-020423-1]
51. eif5a ENSDARG00000017235 377.01 2826.00 eukaryotic translation initiation factor 5A [Source:ZFIN;Acc:ZDB-GENE-040426-2229]
52. rps26l ENSDARG00000030408 377.01 2826.00 ribosomal protein S26, like [Source:ZFIN;Acc:ZDB-GENE-040426-1706]
53. zgc:66286 zgc:66286 377.01 2826.00
54. rplp1 ENSDARG00000021864 357.24 2677.81 ribosomal protein, large, P1 [Source:ZFIN;Acc:ZDB-GENE-030131-8663]
55. rps20 ENSDARG00000036044 354.60 2658.02 ribosomal protein S20 [Source:ZFIN;Acc:ZDB-GENE-040426-2284]
56. rpl21 ENSDARG00000010516, ENSDARG00000110263 351.96 2638.23 ribosomal protein L21 [Source:ZFIN;Acc:ZDB-GENE-030131-8512]
57. rpl36 ENSDARG00000100588 348.01 2608.62 ribosomal protein L36 [Source:ZFIN;Acc:ZDB-GENE-040622-2]
58. fabp3 ENSDARG00000023290 334.83 2509.83 fatty acid binding protein 3, muscle and heart [Source:ZFIN;Acc:ZDB-GENE-020318-2]
59. tnni2b.1 ENSDARG00000035958 329.55 2470.25 troponin I type 2b (skeletal, fast), tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-050417-49]
60. rpl26 ENSDARG00000102317 322.96 2420.85 ribosomal protein L26 [Source:ZFIN;Acc:ZDB-GENE-040426-2117]
61. si:ch211-226o13.2 321.65 2411.03 si:ch211-226o13.2
62. rps23 ENSDARG00000021838 312.42 2341.85 ribosomal protein S23 [Source:ZFIN;Acc:ZDB-GENE-080220-50]
63. mt-co1 ENSDARG00000063905 308.46 2312.16 cytochrome c oxidase I, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-14]
64. myl10 ENSDARG00000062592 308.46 2312.16 myosin, light chain 10, regulatory [Source:ZFIN;Acc:ZDB-GENE-050417-421]
65. rps15 ENSDARG00000070849, ENSDARG00000110979 307.14 2302.27 ribosomal protein S15 [Source:ZFIN;Acc:ZDB-GENE-030131-9092]
66. rpl19 ENSDARG00000013307 304.51 2282.55 ribosomal protein L19 [Source:ZFIN;Acc:ZDB-GENE-040426-2290]
67. tpm3 ENSDARG00000005162 304.51 2282.55 tropomyosin 3 [Source:ZFIN;Acc:ZDB-GENE-030826-16]
68. rpl9 ENSDARG00000037350, ENSDARG00000112384 297.92 2233.16 ribosomal protein L9 [Source:ZFIN;Acc:ZDB-GENE-030131-8646]
69. rps14 ENSDARG00000036629 297.92 2233.16 ribosomal protein S14 [Source:ZFIN;Acc:ZDB-GENE-030131-8631]
70. cyt1l ENSDARG00000036832 295.28 2213.37 type I cytokeratin, enveloping layer, like [Source:ZFIN;Acc:ZDB-GENE-061026-4]
71. rps12 ENSDARG00000036875, ENSDARG00000115157 290.01 2173.86 ribosomal protein S12 [Source:ZFIN;Acc:ZDB-GENE-030131-8951]
72. myhz2 ENSDARG00000012944 284.74 2134.36 myosin, heavy polypeptide 2, fast muscle specific [Source:ZFIN;Acc:ZDB-GENE-020604-1]
73. apoa4 apoa4 283.42 2124.47
74. rps2 ENSDARG00000077291 280.78 2104.68 ribosomal protein S2 [Source:ZFIN;Acc:ZDB-GENE-040426-2454]
75. ttna ttna 267.60 2005.88
76. zgc:153129 zgc:153129 263.64 1976.20
77. rpl27 ENSDARG00000015128 262.33 1966.38 ribosomal protein L27 [Source:ZFIN;Acc:ZDB-GENE-030131-4343]
78. rpl11 ENSDARG00000043509 258.37 1936.70 ribosomal protein L11 [Source:ZFIN;Acc:ZDB-GENE-040625-147]
79. apoa1a ENSDARG00000012076, ENSDARG00000110395 253.10 1897.19 apolipoprotein A-Ia [Source:ZFIN;Acc:ZDB-GENE-990415-14]
80. ptmab ENSDARG00000101766 251.78 1887.30 prothymosin alpha b [Source:ZFIN;Acc:ZDB-GENE-030131-8681]
81. rps15a ENSDARG00000010160 250.46 1877.40 ribosomal protein S15a [Source:ZFIN;Acc:ZDB-GENE-030131-8708]
82. RPL29 ENSDARG00000077717 247.83 1857.69 ribosomal protein L29 [Source:ZFIN;Acc:ZDB-GENE-040801-167]
83. rpl7 ENSDARG00000007320 245.19 1837.90 ribosomal protein L7 [Source:ZFIN;Acc:ZDB-GENE-030131-8654]
84. tnnt3b ENSDARG00000068457 242.55 1818.11 troponin T type 3b (skeletal, fast) [Source:ZFIN;Acc:ZDB-GENE-030520-2]
85. rpl18 ENSDARG00000029533 238.60 1788.50 ribosomal protein L18 [Source:ZFIN;Acc:ZDB-GENE-040801-165]
86. rpl6 ENSDARG00000058451 238.60 1788.50 ribosomal protein L6 [Source:ZFIN;Acc:ZDB-GENE-030131-8671]
87. rps27.1 ENSDARG00000023298 237.28 1778.61 ribosomal protein S27, isoform 1 [Source:ZFIN;Acc:ZDB-GENE-050522-549]
88. rps5 ENSDARG00000043453 234.64 1758.82 ribosomal protein S5 [Source:ZFIN;Acc:ZDB-GENE-020419-12]
89. rps9 ENSDARG00000011405, ENSDARG00000113248 234.64 1758.82 ribosomal protein S9 [Source:ZFIN;Acc:ZDB-GENE-010724-15]
90. gapdh ENSDARG00000043457 230.69 1729.21 glyceraldehyde-3-phosphate dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-030115-1]
91. COX5B_1 ENSDARG00000015978 225.42 1689.71 cytochrome c oxidase subunit 5B [Source:HGNC Symbol;Acc:HGNC:2269]
92. rpl5b ENSDARG00000015862, ENSDARG00000109661 222.78 1669.92 ribosomal protein L5b [Source:ZFIN;Acc:ZDB-GENE-040625-93]
93. tmem38a ENSDARG00000024047 220.14 1650.13 transmembrane protein 38A [Source:ZFIN;Acc:ZDB-GENE-040426-1888]
94. mylpfb ENSDARG00000002589 218.82 1640.24 myosin light chain, phosphorylatable, fast skeletal muscle b [Source:ZFIN;Acc:ZDB-GENE-040912-115]
95. rps6 ENSDARG00000019778 218.82 1640.24 ribosomal protein S6 [Source:ZFIN;Acc:ZDB-GENE-040801-8]
96. mt-nd3 ENSDARG00000063914 214.87 1610.63 NADH dehydrogenase 3, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-9]
97. cirbp cirbp 213.55 1600.73
98. rplp0 ENSDARG00000051783 213.55 1600.73 ribosomal protein, large, P0 [Source:ZFIN;Acc:ZDB-GENE-000629-1]
99. rpl15 ENSDARG00000009285 209.60 1571.12 ribosomal protein L15 [Source:ZFIN;Acc:ZDB-GENE-040801-183]
100. rbp4 ENSDARG00000101199 205.64 1541.44 retinol binding protein 4, plasma [Source:ZFIN;Acc:ZDB-GENE-000210-19]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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