Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Zebrafish_28hpf_whole2, section s46.

Sample reads: 133,397. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. AC024175.4 AC024175.4 7007.55 52531.79
2. krt4 ENSDARG00000017624, ENSDARG00000115790 3339.28 25032.77 keratin 4 [Source:ZFIN;Acc:ZDB-GENE-000607-83]
3. tpma ENSDARG00000033683 2689.21 20159.54 alpha-tropomyosin [Source:ZFIN;Acc:ZDB-GENE-990415-269]
4. ckmb ENSDARG00000040565 2101.87 15756.58 creatine kinase, muscle b [Source:ZFIN;Acc:ZDB-GENE-040426-2128]
5. mt-nd2 ENSDARG00000063899 1640.99 12301.61 NADH dehydrogenase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-8]
6. ckma ENSDARG00000035327, ENSDARG00000114671 1591.10 11927.61 creatine kinase, muscle a [Source:ZFIN;Acc:ZDB-GENE-980526-109]
7. actc1b ENSDARG00000099197 1442.91 10816.71 actin, alpha, cardiac muscle 1b [Source:ZFIN;Acc:ZDB-GENE-000322-1]
8. mt-nd4 ENSDARG00000063917 1424.63 10679.68 NADH dehydrogenase 4, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-10]
9. atp2a1 ENSDARG00000020574 1408.33 10557.48 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 1 [Source:ZFIN;Acc:ZDB-GENE-020905-1]
10. mt-co2 ENSDARG00000063908 1287.30 9650.19 cytochrome c oxidase II, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-15]
11. mt-atp6 ENSDARG00000063911 1120.83 8402.25 ATP synthase 6, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-18]
12. mylpfa ENSDARG00000053254, ENSDARG00000112448, ENSDARG00000113256 1088.72 8161.54 myosin light chain, phosphorylatable, fast skeletal muscle a [Source:ZFIN;Acc:ZDB-GENE-990712-15]
13. mylz3 ENSDARG00000017441 980.54 7350.57 myosin, light polypeptide 3, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-000322-6]
14. mt-co3 ENSDARG00000063912 978.57 7335.81 cytochrome c oxidase III, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-16]
15. eef1a1l1 ENSDARG00000020850 949.42 7117.29 eukaryotic translation elongation factor 1 alpha 1, like 1 [Source:ZFIN;Acc:ZDB-GENE-990415-52]
16. myhz1.3 ENSDARG00000067997 902.50 6765.55 myosin, heavy polypeptide 1.3, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-070705-74]
17. mt-nd1 ENSDARG00000063895 881.25 6606.25 NADH dehydrogenase 1, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-7]
18. tnnc2 ENSDARG00000070835, ENSDARG00000111155 789.87 5921.23 troponin C type 2 (fast) [Source:ZFIN;Acc:ZDB-GENE-000322-2]
19. tmsb4x ENSDARG00000077777 763.19 5721.22 thymosin beta 4 X-linked [Source:ZFIN;Acc:ZDB-GENE-030131-8304]
20. si:dkey-151g10.6 si:dkey-151g10.6 733.06 5495.35
21. actb2 ENSDARG00000037870 664.40 4980.65 actin, beta 2 [Source:ZFIN;Acc:ZDB-GENE-000329-3]
22. mt-cyb ENSDARG00000063924 639.21 4791.81 cytochrome b, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-17]
23. apoa2 ENSDARG00000015866 616.48 4621.42 apolipoprotein A-II [Source:ZFIN;Acc:ZDB-GENE-030131-1046]
24. apoa1b ENSDARG00000101324 605.12 4536.26 apolipoprotein A-Ib [Source:ZFIN;Acc:ZDB-GENE-050302-172]
25. ppiaa ENSDARG00000009212 595.74 4465.94 peptidylprolyl isomerase Aa (cyclophilin A) [Source:ZFIN;Acc:ZDB-GENE-030131-8556]
26. acta1b ENSDARG00000055618 590.80 4428.91 actin, alpha 1b, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-030131-55]
27. pvalb2 ENSDARG00000002768, ENSDARG00000114085 565.60 4240.00 parvalbumin 2 [Source:ZFIN;Acc:ZDB-GENE-000322-4]
28. apoc1l apoc1l 548.31 4110.38
29. apoeb ENSDARG00000040295 512.25 3840.06 apolipoprotein Eb [Source:ZFIN;Acc:ZDB-GENE-980526-368]
30. myl1 ENSDARG00000014196 504.84 3784.51 myosin, light chain 1, alkali; skeletal, fast [Source:ZFIN;Acc:ZDB-GENE-030131-8109]
31. actb1 ENSDARG00000037746, ENSDARG00000113649 503.86 3777.16 actin, beta 1 [Source:ZFIN;Acc:ZDB-GENE-000329-1]
32. apobb apobb 501.88 3762.32
33. eef2b ENSDARG00000100371, ENSDARG00000109247 477.18 3577.16 eukaryotic translation elongation factor 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5128]
34. hmga1a ENSDARG00000028335 455.94 3417.93 high mobility group AT-hook 1a [Source:ZFIN;Acc:ZDB-GENE-010502-1]
35. rpl23 ENSDARG00000053457 451.99 3388.32 ribosomal protein L23 [Source:ZFIN;Acc:ZDB-GENE-030131-8756]
36. zgc:161979_1 zgc:161979_1 443.10 3321.68
37. tnnt3a ENSDARG00000030270 436.18 3269.80 troponin T type 3a (skeletal, fast) [Source:ZFIN;Acc:ZDB-GENE-000322-3]
38. rpl10a ENSDARG00000042905, ENSDARG00000115649 430.25 3225.35 ribosomal protein L10a [Source:ZFIN;Acc:ZDB-GENE-030131-2025]
39. zgc:112425 zgc:112425 429.27 3218.00
40. aldoab ENSDARG00000034470 411.48 3084.64 aldolase a, fructose-bisphosphate, b [Source:ZFIN;Acc:ZDB-GENE-040426-2299]
41. zgc:66286 zgc:66286 405.55 3040.19
42. rpl8 ENSDARG00000014867 389.75 2921.74 ribosomal protein L8 [Source:ZFIN;Acc:ZDB-GENE-040426-1670]
43. hspa8 ENSDARG00000068992, ENSDARG00000114726 383.82 2877.29 heat shock protein 8 [Source:ZFIN;Acc:ZDB-GENE-990415-92]
44. tnni2a.4 ENSDARG00000029069 377.89 2832.84 troponin I type 2a (skeletal, fast), tandem duplicate 4 [Source:ZFIN;Acc:ZDB-GENE-040625-119]
45. zgc:161979 zgc:161979 372.46 2792.13
46. si:ch211-226o13.2 363.07 2721.74 si:ch211-226o13.2
47. rpl21 ENSDARG00000010516, ENSDARG00000110263 352.21 2640.33 ribosomal protein L21 [Source:ZFIN;Acc:ZDB-GENE-030131-8512]
48. zgc:92533 zgc:92533 349.74 2621.81
49. btf3 ENSDARG00000035400, ENSDARG00000116462 348.75 2614.39 basic transcription factor 3 [Source:ZFIN;Acc:ZDB-GENE-030131-8731]
50. acta1a ENSDARG00000036371 345.78 2592.12 actin, alpha 1a, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-050417-267]
51. ttna ttna 341.34 2558.84
52. mt-co1 ENSDARG00000063905 334.42 2506.96 cytochrome c oxidase I, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-14]
53. tnni2b.1 ENSDARG00000035958 332.45 2492.20 troponin I type 2b (skeletal, fast), tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-050417-49]
54. rpl9 ENSDARG00000037350, ENSDARG00000112384 328.99 2466.26 ribosomal protein L9 [Source:ZFIN;Acc:ZDB-GENE-030131-8646]
55. rps27a ENSDARG00000032725, ENSDARG00000114059 326.02 2443.99 ribosomal protein S27a [Source:ZFIN;Acc:ZDB-GENE-030131-10018]
56. eif5a ENSDARG00000017235 323.06 2421.81 eukaryotic translation initiation factor 5A [Source:ZFIN;Acc:ZDB-GENE-040426-2229]
57. rpl26 ENSDARG00000102317 301.33 2258.91 ribosomal protein L26 [Source:ZFIN;Acc:ZDB-GENE-040426-2117]
58. rpl36a ENSDARG00000058105, ENSDARG00000112656 291.45 2184.84 ribosomal protein L36A [Source:ZFIN;Acc:ZDB-GENE-020423-1]
59. rps2 ENSDARG00000077291 275.64 2066.32 ribosomal protein S2 [Source:ZFIN;Acc:ZDB-GENE-040426-2454]
60. rps23 ENSDARG00000021838 274.65 2058.90 ribosomal protein S23 [Source:ZFIN;Acc:ZDB-GENE-080220-50]
61. rpl18a ENSDARG00000025073 273.17 2047.81 ribosomal protein L18a [Source:ZFIN;Acc:ZDB-GENE-040426-1071]
62. fabp3 ENSDARG00000023290 268.23 2010.77 fatty acid binding protein 3, muscle and heart [Source:ZFIN;Acc:ZDB-GENE-020318-2]
63. rplp0 ENSDARG00000051783 267.24 2003.35 ribosomal protein, large, P0 [Source:ZFIN;Acc:ZDB-GENE-000629-1]
64. rplp1 ENSDARG00000021864 266.75 1999.68 ribosomal protein, large, P1 [Source:ZFIN;Acc:ZDB-GENE-030131-8663]
65. rpl19 ENSDARG00000013307 266.25 1995.93 ribosomal protein L19 [Source:ZFIN;Acc:ZDB-GENE-040426-2290]
66. myl10 ENSDARG00000062592 256.37 1921.87 myosin, light chain 10, regulatory [Source:ZFIN;Acc:ZDB-GENE-050417-421]
67. pvalb1 ENSDARG00000037789 256.37 1921.87 parvalbumin 1 [Source:ZFIN;Acc:ZDB-GENE-040625-57]
68. tnnt3b ENSDARG00000068457 255.88 1918.19 troponin T type 3b (skeletal, fast) [Source:ZFIN;Acc:ZDB-GENE-030520-2]
69. cyt1l ENSDARG00000036832 253.41 1899.68 type I cytokeratin, enveloping layer, like [Source:ZFIN;Acc:ZDB-GENE-061026-4]
70. rps14 ENSDARG00000036629 251.93 1888.58 ribosomal protein S14 [Source:ZFIN;Acc:ZDB-GENE-030131-8631]
71. tpm3 ENSDARG00000005162 251.43 1884.83 tropomyosin 3 [Source:ZFIN;Acc:ZDB-GENE-030826-16]
72. zgc:113413 zgc:113413 249.46 1870.07
73. rps26l ENSDARG00000030408 241.55 1810.77 ribosomal protein S26, like [Source:ZFIN;Acc:ZDB-GENE-040426-1706]
74. apoa1a ENSDARG00000012076, ENSDARG00000110395 231.68 1736.78 apolipoprotein A-Ia [Source:ZFIN;Acc:ZDB-GENE-990415-14]
75. rpl15 ENSDARG00000009285 229.70 1721.94 ribosomal protein L15 [Source:ZFIN;Acc:ZDB-GENE-040801-183]
76. ttnb ttnb 229.21 1718.26
77. rbfox1l ENSDARG00000021184, ENSDARG00000111700 227.23 1703.42 RNA binding fox-1 homolog 1, like [Source:ZFIN;Acc:ZDB-GENE-040923-2]
78. rpl27 ENSDARG00000015128 225.75 1692.32 ribosomal protein L27 [Source:ZFIN;Acc:ZDB-GENE-030131-4343]
79. gapdh ENSDARG00000043457 224.27 1681.23 glyceraldehyde-3-phosphate dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-030115-1]
80. rpl18 ENSDARG00000029533 224.27 1681.23 ribosomal protein L18 [Source:ZFIN;Acc:ZDB-GENE-040801-165]
81. rpl36 ENSDARG00000100588 223.77 1677.48 ribosomal protein L36 [Source:ZFIN;Acc:ZDB-GENE-040622-2]
82. apoa4 apoa4 223.28 1673.81
83. rps20 ENSDARG00000036044 222.78 1670.06 ribosomal protein S20 [Source:ZFIN;Acc:ZDB-GENE-040426-2284]
84. rpl11 ENSDARG00000043509 220.81 1655.29 ribosomal protein L11 [Source:ZFIN;Acc:ZDB-GENE-040625-147]
85. myhz2 ENSDARG00000012944 218.34 1636.78 myosin, heavy polypeptide 2, fast muscle specific [Source:ZFIN;Acc:ZDB-GENE-020604-1]
86. ptmab ENSDARG00000101766 217.84 1633.03 prothymosin alpha b [Source:ZFIN;Acc:ZDB-GENE-030131-8681]
87. ATP5B 212.90 1596.00 ATP synthase, H+ transporting, mitochondrial F1 complex, beta polypeptide
88. zgc:153129 zgc:153129 212.90 1596.00
89. rps12 ENSDARG00000036875, ENSDARG00000115157 209.45 1570.13 ribosomal protein S12 [Source:ZFIN;Acc:ZDB-GENE-030131-8951]
90. rps5 ENSDARG00000043453 209.45 1570.13 ribosomal protein S5 [Source:ZFIN;Acc:ZDB-GENE-020419-12]
91. rps9 ENSDARG00000011405, ENSDARG00000113248 209.45 1570.13 ribosomal protein S9 [Source:ZFIN;Acc:ZDB-GENE-010724-15]
92. desma ENSDARG00000058656 205.99 1544.19 desmin a [Source:ZFIN;Acc:ZDB-GENE-980526-221]
93. mylpfb ENSDARG00000002589 205.00 1536.77 myosin light chain, phosphorylatable, fast skeletal muscle b [Source:ZFIN;Acc:ZDB-GENE-040912-115]
94. rpl7 ENSDARG00000007320 203.02 1521.93 ribosomal protein L7 [Source:ZFIN;Acc:ZDB-GENE-030131-8654]
95. col1a1a ENSDARG00000012405, ENSDARG00000116113 202.04 1514.58 collagen, type I, alpha 1a [Source:ZFIN;Acc:ZDB-GENE-030131-9102]
96. rps4x ENSDARG00000014690 200.55 1503.41 ribosomal protein S4 X-linked [Source:ZFIN;Acc:ZDB-GENE-040927-19]
97. rpl5b ENSDARG00000015862, ENSDARG00000109661 199.57 1496.07 ribosomal protein L5b [Source:ZFIN;Acc:ZDB-GENE-040625-93]
98. RPL29 ENSDARG00000077717 197.59 1481.22 ribosomal protein L29 [Source:ZFIN;Acc:ZDB-GENE-040801-167]
99. rps15 ENSDARG00000070849, ENSDARG00000110979 197.10 1477.55 ribosomal protein S15 [Source:ZFIN;Acc:ZDB-GENE-030131-9092]
100. rps27.1 ENSDARG00000023298 194.63 1459.04 ribosomal protein S27, isoform 1 [Source:ZFIN;Acc:ZDB-GENE-050522-549]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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