Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Experiment Zebrafish_28hpf_whole2, section s45.

Sample reads: 133,394. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. AC024175.4 AC024175.4 12495.33 93673.61
2. krt4 ENSDARG00000017624, ENSDARG00000115790 3360.08 25189.48 keratin 4 [Source:ZFIN;Acc:ZDB-GENE-000607-83]
3. tpma ENSDARG00000033683 2442.09 18307.59 alpha-tropomyosin [Source:ZFIN;Acc:ZDB-GENE-990415-269]
4. ckmb ENSDARG00000040565 2066.88 15494.76 creatine kinase, muscle b [Source:ZFIN;Acc:ZDB-GENE-040426-2128]
5. mt-co2 ENSDARG00000063908 2035.23 15257.49 cytochrome c oxidase II, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-15]
6. mt-nd2 ENSDARG00000063899 1833.19 13742.86 NADH dehydrogenase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-8]
7. mt-atp6 ENSDARG00000063911 1559.47 11690.86 ATP synthase 6, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-18]
8. tmsb4x ENSDARG00000077777 1343.47 10071.58 thymosin beta 4 X-linked [Source:ZFIN;Acc:ZDB-GENE-030131-8304]
9. mt-nd4 ENSDARG00000063917 1322.99 9918.05 NADH dehydrogenase 4, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-10]
10. ckma ENSDARG00000035327, ENSDARG00000114671 1293.20 9694.72 creatine kinase, muscle a [Source:ZFIN;Acc:ZDB-GENE-980526-109]
11. mt-co3 ENSDARG00000063912 1080.92 8103.32 cytochrome c oxidase III, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-16]
12. atp2a1 ENSDARG00000020574 1035.30 7761.32 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 1 [Source:ZFIN;Acc:ZDB-GENE-020905-1]
13. mt-nd1 ENSDARG00000063895 971.99 7286.71 NADH dehydrogenase 1, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-7]
14. mylz3 ENSDARG00000017441 950.58 7126.20 myosin, light polypeptide 3, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-000322-6]
15. actc1b ENSDARG00000099197 923.58 6923.79 actin, alpha, cardiac muscle 1b [Source:ZFIN;Acc:ZDB-GENE-000322-1]
16. mylpfa ENSDARG00000053254, ENSDARG00000112448, ENSDARG00000113256 915.20 6860.97 myosin light chain, phosphorylatable, fast skeletal muscle a [Source:ZFIN;Acc:ZDB-GENE-990712-15]
17. myhz1.3 ENSDARG00000067997 884.48 6630.67 myosin, heavy polypeptide 1.3, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-070705-74]
18. tnnc2 ENSDARG00000070835, ENSDARG00000111155 882.61 6616.65 troponin C type 2 (fast) [Source:ZFIN;Acc:ZDB-GENE-000322-2]
19. si:dkey-151g10.6 si:dkey-151g10.6 822.10 6163.03
20. eef1a1l1 ENSDARG00000020850 760.65 5702.36 eukaryotic translation elongation factor 1 alpha 1, like 1 [Source:ZFIN;Acc:ZDB-GENE-990415-52]
21. mt-cyb ENSDARG00000063924 715.03 5360.36 cytochrome b, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-17]
22. actb2 ENSDARG00000037870 641.48 4808.98 actin, beta 2 [Source:ZFIN;Acc:ZDB-GENE-000329-3]
23. apoa1b ENSDARG00000101324 635.89 4767.07 apolipoprotein A-Ib [Source:ZFIN;Acc:ZDB-GENE-050302-172]
24. pvalb2 ENSDARG00000002768, ENSDARG00000114085 602.38 4515.86 parvalbumin 2 [Source:ZFIN;Acc:ZDB-GENE-000322-4]
25. ppiaa ENSDARG00000009212 567.00 4250.62 peptidylprolyl isomerase Aa (cyclophilin A) [Source:ZFIN;Acc:ZDB-GENE-030131-8556]
26. apoc1l apoc1l 565.13 4236.60
27. hmga1a ENSDARG00000028335 527.89 3957.43 high mobility group AT-hook 1a [Source:ZFIN;Acc:ZDB-GENE-010502-1]
28. actb1 ENSDARG00000037746, ENSDARG00000113649 505.55 3789.95 actin, beta 1 [Source:ZFIN;Acc:ZDB-GENE-000329-1]
29. zgc:161979 zgc:161979 485.07 3636.42
30. acta1b ENSDARG00000055618 484.13 3629.37 actin, alpha 1b, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-030131-55]
31. apobb apobb 480.41 3601.48
32. rpl23 ENSDARG00000053457 480.41 3601.48 ribosomal protein L23 [Source:ZFIN;Acc:ZDB-GENE-030131-8756]
33. zgc:161979_1 zgc:161979_1 466.45 3496.83
34. ttna ttna 441.31 3308.36
35. apoa2 ENSDARG00000015866 437.58 3280.40 apolipoprotein A-II [Source:ZFIN;Acc:ZDB-GENE-030131-1046]
36. apoeb ENSDARG00000040295 430.14 3224.63 apolipoprotein Eb [Source:ZFIN;Acc:ZDB-GENE-980526-368]
37. rpl8 ENSDARG00000014867 411.51 3084.96 ribosomal protein L8 [Source:ZFIN;Acc:ZDB-GENE-040426-1670]
38. mt-co1 ENSDARG00000063905 409.65 3071.02 cytochrome c oxidase I, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-14]
39. myl1 ENSDARG00000014196 407.79 3057.08 myosin, light chain 1, alkali; skeletal, fast [Source:ZFIN;Acc:ZDB-GENE-030131-8109]
40. tnnt3a ENSDARG00000030270 406.86 3050.10 troponin T type 3a (skeletal, fast) [Source:ZFIN;Acc:ZDB-GENE-000322-3]
41. aldoab ENSDARG00000034470 396.62 2973.34 aldolase a, fructose-bisphosphate, b [Source:ZFIN;Acc:ZDB-GENE-040426-2299]
42. zgc:112425 zgc:112425 388.24 2910.51
43. rpl10a ENSDARG00000042905, ENSDARG00000115649 387.31 2903.54 ribosomal protein L10a [Source:ZFIN;Acc:ZDB-GENE-030131-2025]
44. acta1a ENSDARG00000036371 378.93 2840.72 actin, alpha 1a, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-050417-267]
45. btf3 ENSDARG00000035400, ENSDARG00000116462 378.93 2840.72 basic transcription factor 3 [Source:ZFIN;Acc:ZDB-GENE-030131-8731]
46. zgc:92533 zgc:92533 374.27 2805.79
47. rpl18a ENSDARG00000025073 371.48 2784.87 ribosomal protein L18a [Source:ZFIN;Acc:ZDB-GENE-040426-1071]
48. zgc:66286 zgc:66286 368.69 2763.95
49. hspa8 ENSDARG00000068992, ENSDARG00000114726 366.83 2750.01 heat shock protein 8 [Source:ZFIN;Acc:ZDB-GENE-990415-92]
50. rpl36a ENSDARG00000058105, ENSDARG00000112656 363.10 2722.05 ribosomal protein L36A [Source:ZFIN;Acc:ZDB-GENE-020423-1]
51. rps23 ENSDARG00000021838 352.86 2645.28 ribosomal protein S23 [Source:ZFIN;Acc:ZDB-GENE-080220-50]
52. rpl21 ENSDARG00000010516, ENSDARG00000110263 349.14 2617.39 ribosomal protein L21 [Source:ZFIN;Acc:ZDB-GENE-030131-8512]
53. tnni2b.1 ENSDARG00000035958 346.34 2596.40 troponin I type 2b (skeletal, fast), tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-050417-49]
54. tnni2a.4 ENSDARG00000029069 345.41 2589.43 troponin I type 2a (skeletal, fast), tandem duplicate 4 [Source:ZFIN;Acc:ZDB-GENE-040625-119]
55. eef2b ENSDARG00000100371, ENSDARG00000109247 344.48 2582.46 eukaryotic translation elongation factor 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5128]
56. rps26l ENSDARG00000030408 332.38 2491.75 ribosomal protein S26, like [Source:ZFIN;Acc:ZDB-GENE-040426-1706]
57. myl10 ENSDARG00000062592 325.86 2442.87 myosin, light chain 10, regulatory [Source:ZFIN;Acc:ZDB-GENE-050417-421]
58. rpl26 ENSDARG00000102317 323.07 2421.96 ribosomal protein L26 [Source:ZFIN;Acc:ZDB-GENE-040426-2117]
59. rps27a ENSDARG00000032725, ENSDARG00000114059 323.07 2421.96 ribosomal protein S27a [Source:ZFIN;Acc:ZDB-GENE-030131-10018]
60. si:ch211-226o13.2 322.14 2414.98 si:ch211-226o13.2
61. rplp1 ENSDARG00000021864 321.20 2407.94 ribosomal protein, large, P1 [Source:ZFIN;Acc:ZDB-GENE-030131-8663]
62. rps20 ENSDARG00000036044 319.34 2393.99 ribosomal protein S20 [Source:ZFIN;Acc:ZDB-GENE-040426-2284]
63. cyt1l ENSDARG00000036832 314.69 2359.13 type I cytokeratin, enveloping layer, like [Source:ZFIN;Acc:ZDB-GENE-061026-4]
64. rps14 ENSDARG00000036629 279.31 2093.90 ribosomal protein S14 [Source:ZFIN;Acc:ZDB-GENE-030131-8631]
65. rpl27 ENSDARG00000015128 274.65 2058.97 ribosomal protein L27 [Source:ZFIN;Acc:ZDB-GENE-030131-4343]
66. eif5a ENSDARG00000017235 266.27 1996.14 eukaryotic translation initiation factor 5A [Source:ZFIN;Acc:ZDB-GENE-040426-2229]
67. tpm3 ENSDARG00000005162 266.27 1996.14 tropomyosin 3 [Source:ZFIN;Acc:ZDB-GENE-030826-16]
68. rps15 ENSDARG00000070849, ENSDARG00000110979 264.41 1982.20 ribosomal protein S15 [Source:ZFIN;Acc:ZDB-GENE-030131-9092]
69. zgc:113413 zgc:113413 264.41 1982.20
70. rps5 ENSDARG00000043453 261.62 1961.28 ribosomal protein S5 [Source:ZFIN;Acc:ZDB-GENE-020419-12]
71. rpl11 ENSDARG00000043509 256.03 1919.38 ribosomal protein L11 [Source:ZFIN;Acc:ZDB-GENE-040625-147]
72. fabp3 ENSDARG00000023290 253.24 1898.46 fatty acid binding protein 3, muscle and heart [Source:ZFIN;Acc:ZDB-GENE-020318-2]
73. rpl36 ENSDARG00000100588 245.79 1842.61 ribosomal protein L36 [Source:ZFIN;Acc:ZDB-GENE-040622-2]
74. zgc:153129 zgc:153129 245.79 1842.61
75. rpl18 ENSDARG00000029533 242.07 1814.72 ribosomal protein L18 [Source:ZFIN;Acc:ZDB-GENE-040801-165]
76. tnnt3b ENSDARG00000068457 241.14 1807.75 troponin T type 3b (skeletal, fast) [Source:ZFIN;Acc:ZDB-GENE-030520-2]
77. rpl19 ENSDARG00000013307 238.34 1786.76 ribosomal protein L19 [Source:ZFIN;Acc:ZDB-GENE-040426-2290]
78. rpl9 ENSDARG00000037350, ENSDARG00000112384 232.76 1744.93 ribosomal protein L9 [Source:ZFIN;Acc:ZDB-GENE-030131-8646]
79. rpl7 ENSDARG00000007320 228.10 1709.99 ribosomal protein L7 [Source:ZFIN;Acc:ZDB-GENE-030131-8654]
80. rps12 ENSDARG00000036875, ENSDARG00000115157 217.86 1633.23 ribosomal protein S12 [Source:ZFIN;Acc:ZDB-GENE-030131-8951]
81. ttnb ttnb 216.93 1626.26
82. rps2 ENSDARG00000077291 214.14 1605.34 ribosomal protein S2 [Source:ZFIN;Acc:ZDB-GENE-040426-2454]
83. rps9 ENSDARG00000011405, ENSDARG00000113248 213.21 1598.37 ribosomal protein S9 [Source:ZFIN;Acc:ZDB-GENE-010724-15]
84. rpl6 ENSDARG00000058451 212.27 1591.32 ribosomal protein L6 [Source:ZFIN;Acc:ZDB-GENE-030131-8671]
85. rps29 ENSDARG00000041232 208.55 1563.43 ribosomal protein S29 [Source:ZFIN;Acc:ZDB-GENE-040622-5]
86. rps15a ENSDARG00000010160 206.69 1549.49 ribosomal protein S15a [Source:ZFIN;Acc:ZDB-GENE-030131-8708]
87. rpsa ENSDARG00000019181 206.69 1549.49 ribosomal protein SA [Source:ZFIN;Acc:ZDB-GENE-040426-811]
88. rps4x ENSDARG00000014690 205.76 1542.52 ribosomal protein S4 X-linked [Source:ZFIN;Acc:ZDB-GENE-040927-19]
89. RPL29 ENSDARG00000077717 204.83 1535.55 ribosomal protein L29 [Source:ZFIN;Acc:ZDB-GENE-040801-167]
90. rbfox1l ENSDARG00000021184, ENSDARG00000111700 203.90 1528.58 RNA binding fox-1 homolog 1, like [Source:ZFIN;Acc:ZDB-GENE-040923-2]
91. rpl15 ENSDARG00000009285 201.10 1507.58 ribosomal protein L15 [Source:ZFIN;Acc:ZDB-GENE-040801-183]
92. tmem38a ENSDARG00000024047 200.17 1500.61 transmembrane protein 38A [Source:ZFIN;Acc:ZDB-GENE-040426-1888]
93. apoa1a ENSDARG00000012076, ENSDARG00000110395 199.24 1493.64 apolipoprotein A-Ia [Source:ZFIN;Acc:ZDB-GENE-990415-14]
94. rps6 ENSDARG00000019778 197.38 1479.70 ribosomal protein S6 [Source:ZFIN;Acc:ZDB-GENE-040801-8]
95. mylpfb ENSDARG00000002589 195.52 1465.75 myosin light chain, phosphorylatable, fast skeletal muscle b [Source:ZFIN;Acc:ZDB-GENE-040912-115]
96. hsp90aa1.1 ENSDARG00000010478 193.65 1451.73 heat shock protein 90, alpha (cytosolic), class A member 1, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-990415-94]
97. gapdh ENSDARG00000043457 192.72 1444.76 glyceraldehyde-3-phosphate dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-030115-1]
98. ptmab ENSDARG00000101766 191.79 1437.79 prothymosin alpha b [Source:ZFIN;Acc:ZDB-GENE-030131-8681]
99. apoa4 apoa4 190.86 1430.82
100. rps19 ENSDARG00000030602 190.86 1430.82 ribosomal protein S19 [Source:ZFIN;Acc:ZDB-GENE-040426-1716]
First Previous 1 2 3 Next Last
Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA