Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Zebrafish_28hpf_whole2, section s43.

Sample reads: 133,395. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. AC024175.4 AC024175.4 9535.85 71486.05
2. krt4 ENSDARG00000017624, ENSDARG00000115790 3580.81 26843.75 keratin 4 [Source:ZFIN;Acc:ZDB-GENE-000607-83]
3. tpma ENSDARG00000033683 2873.09 21538.29 alpha-tropomyosin [Source:ZFIN;Acc:ZDB-GENE-990415-269]
4. ckmb ENSDARG00000040565 2240.04 16792.59 creatine kinase, muscle b [Source:ZFIN;Acc:ZDB-GENE-040426-2128]
5. mt-nd2 ENSDARG00000063899 1981.41 14853.76 NADH dehydrogenase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-8]
6. mt-co2 ENSDARG00000063908 1587.51 11900.86 cytochrome c oxidase II, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-15]
7. mt-nd4 ENSDARG00000063917 1429.51 10716.40 NADH dehydrogenase 4, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-10]
8. mt-atp6 ENSDARG00000063911 1428.43 10708.31 ATP synthase 6, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-18]
9. tmsb4x ENSDARG00000077777 1085.39 8136.69 thymosin beta 4 X-linked [Source:ZFIN;Acc:ZDB-GENE-030131-8304]
10. mt-co3 ENSDARG00000063912 1082.14 8112.33 cytochrome c oxidase III, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-16]
11. ckma ENSDARG00000035327, ENSDARG00000114671 1074.57 8055.58 creatine kinase, muscle a [Source:ZFIN;Acc:ZDB-GENE-980526-109]
12. mylz3 ENSDARG00000017441 1066.99 7998.75 myosin, light polypeptide 3, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-000322-6]
13. mylpfa ENSDARG00000053254, ENSDARG00000112448, ENSDARG00000113256 1010.72 7576.92 myosin light chain, phosphorylatable, fast skeletal muscle a [Source:ZFIN;Acc:ZDB-GENE-990712-15]
14. myhz1.3 ENSDARG00000067997 940.38 7049.61 myosin, heavy polypeptide 1.3, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-070705-74]
15. mt-nd1 ENSDARG00000063895 911.17 6830.64 NADH dehydrogenase 1, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-7]
16. tnnc2 ENSDARG00000070835, ENSDARG00000111155 845.15 6335.72 troponin C type 2 (fast) [Source:ZFIN;Acc:ZDB-GENE-000322-2]
17. si:dkey-151g10.6 si:dkey-151g10.6 824.59 6181.59
18. apoa1b ENSDARG00000101324 779.14 5840.87 apolipoprotein A-Ib [Source:ZFIN;Acc:ZDB-GENE-050302-172]
19. eef1a1l1 ENSDARG00000020850 748.84 5613.72 eukaryotic translation elongation factor 1 alpha 1, like 1 [Source:ZFIN;Acc:ZDB-GENE-990415-52]
20. pvalb2 ENSDARG00000002768, ENSDARG00000114085 734.78 5508.32 parvalbumin 2 [Source:ZFIN;Acc:ZDB-GENE-000322-4]
21. mt-cyb ENSDARG00000063924 700.15 5248.72 cytochrome b, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-17]
22. atp2a1 ENSDARG00000020574 665.52 4989.11 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 1 [Source:ZFIN;Acc:ZDB-GENE-020905-1]
23. actb2 ENSDARG00000037870 622.23 4664.58 actin, beta 2 [Source:ZFIN;Acc:ZDB-GENE-000329-3]
24. ppiaa ENSDARG00000009212 612.49 4591.57 peptidylprolyl isomerase Aa (cyclophilin A) [Source:ZFIN;Acc:ZDB-GENE-030131-8556]
25. apoc1l apoc1l 606.00 4542.91
26. actb1 ENSDARG00000037746, ENSDARG00000113649 602.75 4518.55 actin, beta 1 [Source:ZFIN;Acc:ZDB-GENE-000329-1]
27. zgc:161979 zgc:161979 588.69 4413.15
28. apoeb ENSDARG00000040295 571.37 4283.31 apolipoprotein Eb [Source:ZFIN;Acc:ZDB-GENE-980526-368]
29. apobb apobb 567.04 4250.85
30. actc1b ENSDARG00000099197 564.88 4234.66 actin, alpha, cardiac muscle 1b [Source:ZFIN;Acc:ZDB-GENE-000322-1]
31. apoa2 ENSDARG00000015866 558.39 4186.00 apolipoprotein A-II [Source:ZFIN;Acc:ZDB-GENE-030131-1046]
32. acta1b ENSDARG00000055618 524.84 3934.49 actin, alpha 1b, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-030131-55]
33. hmga1a ENSDARG00000028335 508.61 3812.82 high mobility group AT-hook 1a [Source:ZFIN;Acc:ZDB-GENE-010502-1]
34. zgc:161979_1 zgc:161979_1 498.87 3739.81
35. rpl8 ENSDARG00000014867 492.38 3691.16 ribosomal protein L8 [Source:ZFIN;Acc:ZDB-GENE-040426-1670]
36. tnnt3a ENSDARG00000030270 454.50 3407.19 troponin T type 3a (skeletal, fast) [Source:ZFIN;Acc:ZDB-GENE-000322-3]
37. rpl23 ENSDARG00000053457 453.42 3399.09 ribosomal protein L23 [Source:ZFIN;Acc:ZDB-GENE-030131-8756]
38. hspa8 ENSDARG00000068992, ENSDARG00000114726 449.09 3366.63 heat shock protein 8 [Source:ZFIN;Acc:ZDB-GENE-990415-92]
39. rpl10a ENSDARG00000042905, ENSDARG00000115649 438.27 3285.52 ribosomal protein L10a [Source:ZFIN;Acc:ZDB-GENE-030131-2025]
40. zgc:66286 zgc:66286 436.10 3269.25
41. btf3 ENSDARG00000035400, ENSDARG00000116462 431.78 3236.86 basic transcription factor 3 [Source:ZFIN;Acc:ZDB-GENE-030131-8731]
42. tnni2a.4 ENSDARG00000029069 424.20 3180.04 troponin I type 2a (skeletal, fast), tandem duplicate 4 [Source:ZFIN;Acc:ZDB-GENE-040625-119]
43. acta1a ENSDARG00000036371 411.21 3082.66 actin, alpha 1a, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-050417-267]
44. aldoab ENSDARG00000034470 407.97 3058.37 aldolase a, fructose-bisphosphate, b [Source:ZFIN;Acc:ZDB-GENE-040426-2299]
45. zgc:112425 zgc:112425 407.97 3058.37
46. rpl18a ENSDARG00000025073 387.41 2904.24 ribosomal protein L18a [Source:ZFIN;Acc:ZDB-GENE-040426-1071]
47. zgc:92533 zgc:92533 364.68 2733.84
48. rpl21 ENSDARG00000010516, ENSDARG00000110263 362.52 2717.65 ribosomal protein L21 [Source:ZFIN;Acc:ZDB-GENE-030131-8512]
49. rps27a ENSDARG00000032725, ENSDARG00000114059 357.11 2677.10 ribosomal protein S27a [Source:ZFIN;Acc:ZDB-GENE-030131-10018]
50. myl10 ENSDARG00000062592 345.20 2587.81 myosin, light chain 10, regulatory [Source:ZFIN;Acc:ZDB-GENE-050417-421]
51. rpl9 ENSDARG00000037350, ENSDARG00000112384 343.04 2571.62 ribosomal protein L9 [Source:ZFIN;Acc:ZDB-GENE-030131-8646]
52. mt-co1 ENSDARG00000063905 340.88 2555.43 cytochrome c oxidase I, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-14]
53. rpl36a ENSDARG00000058105, ENSDARG00000112656 332.22 2490.51 ribosomal protein L36A [Source:ZFIN;Acc:ZDB-GENE-020423-1]
54. tpm3 ENSDARG00000005162 331.14 2482.41 tropomyosin 3 [Source:ZFIN;Acc:ZDB-GENE-030826-16]
55. rpl26 ENSDARG00000102317 328.97 2466.14 ribosomal protein L26 [Source:ZFIN;Acc:ZDB-GENE-040426-2117]
56. rps23 ENSDARG00000021838 324.64 2433.68 ribosomal protein S23 [Source:ZFIN;Acc:ZDB-GENE-080220-50]
57. rplp1 ENSDARG00000021864 321.40 2409.39 ribosomal protein, large, P1 [Source:ZFIN;Acc:ZDB-GENE-030131-8663]
58. si:ch211-226o13.2 321.40 2409.39 si:ch211-226o13.2
59. eef2b ENSDARG00000100371, ENSDARG00000109247 318.15 2385.03 eukaryotic translation elongation factor 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5128]
60. tnni2b.1 ENSDARG00000035958 314.90 2360.67 troponin I type 2b (skeletal, fast), tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-050417-49]
61. myl1 ENSDARG00000014196 313.82 2352.57 myosin, light chain 1, alkali; skeletal, fast [Source:ZFIN;Acc:ZDB-GENE-030131-8109]
62. rpl27 ENSDARG00000015128 311.66 2336.38 ribosomal protein L27 [Source:ZFIN;Acc:ZDB-GENE-030131-4343]
63. rps26l ENSDARG00000030408 310.58 2328.28 ribosomal protein S26, like [Source:ZFIN;Acc:ZDB-GENE-040426-1706]
64. fabp3 ENSDARG00000023290 308.41 2312.01 fatty acid binding protein 3, muscle and heart [Source:ZFIN;Acc:ZDB-GENE-020318-2]
65. ttna ttna 294.34 2206.54
66. rpl19 ENSDARG00000013307 293.26 2198.44 ribosomal protein L19 [Source:ZFIN;Acc:ZDB-GENE-040426-2290]
67. rps5 ENSDARG00000043453 282.44 2117.33 ribosomal protein S5 [Source:ZFIN;Acc:ZDB-GENE-020419-12]
68. rps20 ENSDARG00000036044 278.11 2084.87 ribosomal protein S20 [Source:ZFIN;Acc:ZDB-GENE-040426-2284]
69. rps14 ENSDARG00000036629 270.54 2028.12 ribosomal protein S14 [Source:ZFIN;Acc:ZDB-GENE-030131-8631]
70. eif5a ENSDARG00000017235 264.04 1979.39 eukaryotic translation initiation factor 5A [Source:ZFIN;Acc:ZDB-GENE-040426-2229]
71. rps15 ENSDARG00000070849, ENSDARG00000110979 264.04 1979.39 ribosomal protein S15 [Source:ZFIN;Acc:ZDB-GENE-030131-9092]
72. rpl36 ENSDARG00000100588 257.55 1930.74 ribosomal protein L36 [Source:ZFIN;Acc:ZDB-GENE-040622-2]
73. apoa1a ENSDARG00000012076, ENSDARG00000110395 256.47 1922.64 apolipoprotein A-Ia [Source:ZFIN;Acc:ZDB-GENE-990415-14]
74. cyt1l ENSDARG00000036832 256.47 1922.64 type I cytokeratin, enveloping layer, like [Source:ZFIN;Acc:ZDB-GENE-061026-4]
75. rpl7 ENSDARG00000007320 255.39 1914.55 ribosomal protein L7 [Source:ZFIN;Acc:ZDB-GENE-030131-8654]
76. rpl18 ENSDARG00000029533 249.98 1873.99 ribosomal protein L18 [Source:ZFIN;Acc:ZDB-GENE-040801-165]
77. rpl11 ENSDARG00000043509 248.89 1865.82 ribosomal protein L11 [Source:ZFIN;Acc:ZDB-GENE-040625-147]
78. zgc:113413 zgc:113413 246.73 1849.63
79. cfl1l ENSDARG00000012972 244.56 1833.36 cofilin 1 (non-muscle), like [Source:ZFIN;Acc:ZDB-GENE-040426-2770]
80. rps9 ENSDARG00000011405, ENSDARG00000113248 241.32 1809.07 ribosomal protein S9 [Source:ZFIN;Acc:ZDB-GENE-010724-15]
81. rps15a ENSDARG00000010160 239.15 1792.80 ribosomal protein S15a [Source:ZFIN;Acc:ZDB-GENE-030131-8708]
82. tnnt3b ENSDARG00000068457 233.74 1752.25 troponin T type 3b (skeletal, fast) [Source:ZFIN;Acc:ZDB-GENE-030520-2]
83. ptmab ENSDARG00000101766 232.66 1744.15 prothymosin alpha b [Source:ZFIN;Acc:ZDB-GENE-030131-8681]
84. zgc:153129 zgc:153129 232.66 1744.15
85. gapdh ENSDARG00000043457 231.58 1736.05 glyceraldehyde-3-phosphate dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-030115-1]
86. rps6 ENSDARG00000019778 231.58 1736.05 ribosomal protein S6 [Source:ZFIN;Acc:ZDB-GENE-040801-8]
87. rpl6 ENSDARG00000058451 228.33 1711.69 ribosomal protein L6 [Source:ZFIN;Acc:ZDB-GENE-030131-8671]
88. rps4x ENSDARG00000014690 228.33 1711.69 ribosomal protein S4 X-linked [Source:ZFIN;Acc:ZDB-GENE-040927-19]
89. apoa4 apoa4 225.09 1687.40
90. rpsa ENSDARG00000019181 224.00 1679.23 ribosomal protein SA [Source:ZFIN;Acc:ZDB-GENE-040426-811]
91. pvalb1 ENSDARG00000037789 221.84 1663.04 parvalbumin 1 [Source:ZFIN;Acc:ZDB-GENE-040625-57]
92. tmem38a ENSDARG00000024047 219.68 1646.84 transmembrane protein 38A [Source:ZFIN;Acc:ZDB-GENE-040426-1888]
93. mylpfb ENSDARG00000002589 215.35 1614.38 myosin light chain, phosphorylatable, fast skeletal muscle b [Source:ZFIN;Acc:ZDB-GENE-040912-115]
94. rps12 ENSDARG00000036875, ENSDARG00000115157 215.35 1614.38 ribosomal protein S12 [Source:ZFIN;Acc:ZDB-GENE-030131-8951]
95. rps19 ENSDARG00000030602 211.02 1581.92 ribosomal protein S19 [Source:ZFIN;Acc:ZDB-GENE-040426-1716]
96. RPL29 ENSDARG00000077717 209.94 1573.83 ribosomal protein L29 [Source:ZFIN;Acc:ZDB-GENE-040801-167]
97. rps2 ENSDARG00000077291 207.77 1557.56 ribosomal protein S2 [Source:ZFIN;Acc:ZDB-GENE-040426-2454]
98. rpl5b ENSDARG00000015862, ENSDARG00000109661 200.20 1500.81 ribosomal protein L5b [Source:ZFIN;Acc:ZDB-GENE-040625-93]
99. bhmt ENSDARG00000013430 199.11 1492.64 betaine-homocysteine methyltransferase [Source:ZFIN;Acc:ZDB-GENE-030131-947]
100. hsp90aa1.1 ENSDARG00000010478 199.11 1492.64 heat shock protein 90, alpha (cytosolic), class A member 1, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-990415-94]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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