Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Zebrafish_28hpf_whole2, section s42.

Sample reads: 133,393. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. AC024175.4 AC024175.4 4605.88 34529.10
2. krt4 ENSDARG00000017624, ENSDARG00000115790 3466.67 25988.74 keratin 4 [Source:ZFIN;Acc:ZDB-GENE-000607-83]
3. tpma ENSDARG00000033683 2655.74 19909.40 alpha-tropomyosin [Source:ZFIN;Acc:ZDB-GENE-990415-269]
4. ckmb ENSDARG00000040565 2139.17 16036.81 creatine kinase, muscle b [Source:ZFIN;Acc:ZDB-GENE-040426-2128]
5. mt-nd2 ENSDARG00000063899 2052.59 15387.74 NADH dehydrogenase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-8]
6. mt-co2 ENSDARG00000063908 2038.16 15279.56 cytochrome c oxidase II, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-15]
7. mt-atp6 ENSDARG00000063911 1442.94 10817.35 ATP synthase 6, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-18]
8. mt-nd4 ENSDARG00000063917 1397.49 10476.62 NADH dehydrogenase 4, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-10]
9. tmsb4x ENSDARG00000077777 1278.45 9584.21 thymosin beta 4 X-linked [Source:ZFIN;Acc:ZDB-GENE-030131-8304]
10. ckma ENSDARG00000035327, ENSDARG00000114671 1271.23 9530.09 creatine kinase, muscle a [Source:ZFIN;Acc:ZDB-GENE-980526-109]
11. mt-co3 ENSDARG00000063912 1123.33 8421.32 cytochrome c oxidase III, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-16]
12. mt-nd1 ENSDARG00000063895 1048.30 7858.84 NADH dehydrogenase 1, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-7]
13. atp2a1 ENSDARG00000020574 935.03 7009.68 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 1 [Source:ZFIN;Acc:ZDB-GENE-020905-1]
14. tnnc2 ENSDARG00000070835, ENSDARG00000111155 925.65 6939.36 troponin C type 2 (fast) [Source:ZFIN;Acc:ZDB-GENE-000322-2]
15. si:dkey-151g10.6 si:dkey-151g10.6 919.88 6896.10
16. mylpfa ENSDARG00000053254, ENSDARG00000112448, ENSDARG00000113256 917.71 6879.84 myosin light chain, phosphorylatable, fast skeletal muscle a [Source:ZFIN;Acc:ZDB-GENE-990712-15]
17. myhz1.3 ENSDARG00000067997 886.69 6647.29 myosin, heavy polypeptide 1.3, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-070705-74]
18. mylz3 ENSDARG00000017441 854.22 6403.87 myosin, light polypeptide 3, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-000322-6]
19. actc1b ENSDARG00000099197 773.42 5798.13 actin, alpha, cardiac muscle 1b [Source:ZFIN;Acc:ZDB-GENE-000322-1]
20. pvalb2 ENSDARG00000002768, ENSDARG00000114085 768.37 5760.27 parvalbumin 2 [Source:ZFIN;Acc:ZDB-GENE-000322-4]
21. eef1a1l1 ENSDARG00000020850 758.99 5689.95 eukaryotic translation elongation factor 1 alpha 1, like 1 [Source:ZFIN;Acc:ZDB-GENE-990415-52]
22. apoa1b ENSDARG00000101324 751.05 5630.43 apolipoprotein A-Ib [Source:ZFIN;Acc:ZDB-GENE-050302-172]
23. mt-cyb ENSDARG00000063924 712.09 5338.36 cytochrome b, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-17]
24. zgc:161979 zgc:161979 671.69 5035.49
25. actb2 ENSDARG00000037870 665.92 4992.23 actin, beta 2 [Source:ZFIN;Acc:ZDB-GENE-000329-3]
26. apoa2 ENSDARG00000015866 638.50 4786.67 apolipoprotein A-II [Source:ZFIN;Acc:ZDB-GENE-030131-1046]
27. apobb apobb 603.15 4521.66
28. apoc1l apoc1l 598.82 4489.20
29. ppiaa ENSDARG00000009212 592.33 4440.55 peptidylprolyl isomerase Aa (cyclophilin A) [Source:ZFIN;Acc:ZDB-GENE-030131-8556]
30. zgc:161979_1 zgc:161979_1 588.72 4413.48
31. rpl23 ENSDARG00000053457 588.00 4408.09 ribosomal protein L23 [Source:ZFIN;Acc:ZDB-GENE-030131-8756]
32. apoeb ENSDARG00000040295 577.90 4332.37 apolipoprotein Eb [Source:ZFIN;Acc:ZDB-GENE-980526-368]
33. acta1b ENSDARG00000055618 576.46 4321.57 actin, alpha 1b, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-030131-55]
34. actb1 ENSDARG00000037746, ENSDARG00000113649 550.48 4126.81 actin, beta 1 [Source:ZFIN;Acc:ZDB-GENE-000329-1]
35. rpl10a ENSDARG00000042905, ENSDARG00000115649 524.51 3932.12 ribosomal protein L10a [Source:ZFIN;Acc:ZDB-GENE-030131-2025]
36. rpl8 ENSDARG00000014867 491.32 3683.30 ribosomal protein L8 [Source:ZFIN;Acc:ZDB-GENE-040426-1670]
37. zgc:112425 zgc:112425 460.30 3450.75
38. hmga1a ENSDARG00000028335 451.64 3385.83 high mobility group AT-hook 1a [Source:ZFIN;Acc:ZDB-GENE-010502-1]
39. aldoab ENSDARG00000034470 445.15 3337.18 aldolase a, fructose-bisphosphate, b [Source:ZFIN;Acc:ZDB-GENE-040426-2299]
40. rps27a ENSDARG00000032725, ENSDARG00000114059 412.68 3093.76 ribosomal protein S27a [Source:ZFIN;Acc:ZDB-GENE-030131-10018]
41. rpl21 ENSDARG00000010516, ENSDARG00000110263 405.47 3039.70 ribosomal protein L21 [Source:ZFIN;Acc:ZDB-GENE-030131-8512]
42. hspa8 ENSDARG00000068992, ENSDARG00000114726 400.42 3001.85 heat shock protein 8 [Source:ZFIN;Acc:ZDB-GENE-990415-92]
43. tnni2a.4 ENSDARG00000029069 388.15 2909.86 troponin I type 2a (skeletal, fast), tandem duplicate 4 [Source:ZFIN;Acc:ZDB-GENE-040625-119]
44. myl1 ENSDARG00000014196 385.99 2893.67 myosin, light chain 1, alkali; skeletal, fast [Source:ZFIN;Acc:ZDB-GENE-030131-8109]
45. rps23 ENSDARG00000021838 385.99 2893.67 ribosomal protein S23 [Source:ZFIN;Acc:ZDB-GENE-080220-50]
46. btf3 ENSDARG00000035400, ENSDARG00000116462 385.27 2888.27 basic transcription factor 3 [Source:ZFIN;Acc:ZDB-GENE-030131-8731]
47. rpl26 ENSDARG00000102317 383.82 2877.40 ribosomal protein L26 [Source:ZFIN;Acc:ZDB-GENE-040426-2117]
48. si:ch211-226o13.2 383.82 2877.40 si:ch211-226o13.2
49. zgc:66286 zgc:66286 379.49 2844.94
50. zgc:92533 zgc:92533 375.17 2812.55
51. rpl18a ENSDARG00000025073 367.95 2758.43 ribosomal protein L18a [Source:ZFIN;Acc:ZDB-GENE-040426-1071]
52. acta1a ENSDARG00000036371 367.23 2753.03 actin, alpha 1a, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-050417-267]
53. eef2b ENSDARG00000100371, ENSDARG00000109247 360.74 2704.38 eukaryotic translation elongation factor 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5128]
54. myl10 ENSDARG00000062592 354.24 2655.65 myosin, light chain 10, regulatory [Source:ZFIN;Acc:ZDB-GENE-050417-421]
55. rpl36 ENSDARG00000100588 353.52 2650.25 ribosomal protein L36 [Source:ZFIN;Acc:ZDB-GENE-040622-2]
56. tnnt3a ENSDARG00000030270 345.59 2590.80 troponin T type 3a (skeletal, fast) [Source:ZFIN;Acc:ZDB-GENE-000322-3]
57. mt-co1 ENSDARG00000063905 344.86 2585.33 cytochrome c oxidase I, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-14]
58. rps20 ENSDARG00000036044 341.98 2563.74 ribosomal protein S20 [Source:ZFIN;Acc:ZDB-GENE-040426-2284]
59. rps26l ENSDARG00000030408 337.65 2531.28 ribosomal protein S26, like [Source:ZFIN;Acc:ZDB-GENE-040426-1706]
60. rpl36a ENSDARG00000058105, ENSDARG00000112656 336.21 2520.48 ribosomal protein L36A [Source:ZFIN;Acc:ZDB-GENE-020423-1]
61. tnni2b.1 ENSDARG00000035958 331.88 2488.02 troponin I type 2b (skeletal, fast), tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-050417-49]
62. rplp1 ENSDARG00000021864 319.61 2396.03 ribosomal protein, large, P1 [Source:ZFIN;Acc:ZDB-GENE-030131-8663]
63. ttna ttna 313.12 2347.38
64. rpl19 ENSDARG00000013307 301.58 2260.87 ribosomal protein L19 [Source:ZFIN;Acc:ZDB-GENE-040426-2290]
65. rpl9 ENSDARG00000037350, ENSDARG00000112384 291.47 2185.08 ribosomal protein L9 [Source:ZFIN;Acc:ZDB-GENE-030131-8646]
66. rps15 ENSDARG00000070849, ENSDARG00000110979 290.75 2179.68 ribosomal protein S15 [Source:ZFIN;Acc:ZDB-GENE-030131-9092]
67. tnnt3b ENSDARG00000068457 285.70 2141.82 troponin T type 3b (skeletal, fast) [Source:ZFIN;Acc:ZDB-GENE-030520-2]
68. cyt1l ENSDARG00000036832 281.37 2109.36 type I cytokeratin, enveloping layer, like [Source:ZFIN;Acc:ZDB-GENE-061026-4]
69. zgc:153129 zgc:153129 278.49 2087.77
70. fabp3 ENSDARG00000023290 273.44 2049.91 fatty acid binding protein 3, muscle and heart [Source:ZFIN;Acc:ZDB-GENE-020318-2]
71. rpl27 ENSDARG00000015128 272.72 2044.51 ribosomal protein L27 [Source:ZFIN;Acc:ZDB-GENE-030131-4343]
72. tpm3 ENSDARG00000005162 268.39 2012.05 tropomyosin 3 [Source:ZFIN;Acc:ZDB-GENE-030826-16]
73. rps14 ENSDARG00000036629 264.06 1979.59 ribosomal protein S14 [Source:ZFIN;Acc:ZDB-GENE-030131-8631]
74. rpl11 ENSDARG00000043509 262.62 1968.79 ribosomal protein L11 [Source:ZFIN;Acc:ZDB-GENE-040625-147]
75. rpl18 ENSDARG00000029533 261.89 1963.32 ribosomal protein L18 [Source:ZFIN;Acc:ZDB-GENE-040801-165]
76. apoa1a ENSDARG00000012076, ENSDARG00000110395 253.24 1898.48 apolipoprotein A-Ia [Source:ZFIN;Acc:ZDB-GENE-990415-14]
77. rps29 ENSDARG00000041232 251.07 1882.21 ribosomal protein S29 [Source:ZFIN;Acc:ZDB-GENE-040622-5]
78. rps5 ENSDARG00000043453 249.63 1871.41 ribosomal protein S5 [Source:ZFIN;Acc:ZDB-GENE-020419-12]
79. rps9 ENSDARG00000011405, ENSDARG00000113248 245.30 1838.95 ribosomal protein S9 [Source:ZFIN;Acc:ZDB-GENE-010724-15]
80. cfl1l ENSDARG00000012972 243.86 1828.16 cofilin 1 (non-muscle), like [Source:ZFIN;Acc:ZDB-GENE-040426-2770]
81. ptmab ENSDARG00000101766 238.81 1790.30 prothymosin alpha b [Source:ZFIN;Acc:ZDB-GENE-030131-8681]
82. rps12 ENSDARG00000036875, ENSDARG00000115157 236.64 1774.03 ribosomal protein S12 [Source:ZFIN;Acc:ZDB-GENE-030131-8951]
83. pvalb1 ENSDARG00000037789 235.20 1763.23 parvalbumin 1 [Source:ZFIN;Acc:ZDB-GENE-040625-57]
84. eif5a ENSDARG00000017235 232.31 1741.57 eukaryotic translation initiation factor 5A [Source:ZFIN;Acc:ZDB-GENE-040426-2229]
85. rps2 ENSDARG00000077291 231.59 1736.17 ribosomal protein S2 [Source:ZFIN;Acc:ZDB-GENE-040426-2454]
86. RPL29 ENSDARG00000077717 230.87 1730.77 ribosomal protein L29 [Source:ZFIN;Acc:ZDB-GENE-040801-167]
87. rpl6 ENSDARG00000058451 228.71 1714.58 ribosomal protein L6 [Source:ZFIN;Acc:ZDB-GENE-030131-8671]
88. rpl7 ENSDARG00000007320 227.99 1709.18 ribosomal protein L7 [Source:ZFIN;Acc:ZDB-GENE-030131-8654]
89. rps15a ENSDARG00000010160 225.82 1692.91 ribosomal protein S15a [Source:ZFIN;Acc:ZDB-GENE-030131-8708]
90. ttnb ttnb 225.10 1687.52
91. mylpfb ENSDARG00000002589 223.66 1676.72 myosin light chain, phosphorylatable, fast skeletal muscle b [Source:ZFIN;Acc:ZDB-GENE-040912-115]
92. rps6 ENSDARG00000019778 223.66 1676.72 ribosomal protein S6 [Source:ZFIN;Acc:ZDB-GENE-040801-8]
93. rpl15 ENSDARG00000009285 220.05 1649.66 ribosomal protein L15 [Source:ZFIN;Acc:ZDB-GENE-040801-183]
94. rpsa ENSDARG00000019181 218.61 1638.86 ribosomal protein SA [Source:ZFIN;Acc:ZDB-GENE-040426-811]
95. gapdh ENSDARG00000043457 217.88 1633.39 glyceraldehyde-3-phosphate dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-030115-1]
96. rplp2l ENSDARG00000011201 217.88 1633.39 ribosomal protein, large P2, like [Source:ZFIN;Acc:ZDB-GENE-070327-2]
97. pgam2 ENSDARG00000057571 209.95 1573.94 phosphoglycerate mutase 2 (muscle) [Source:ZFIN;Acc:ZDB-GENE-040116-6]
98. zgc:113413 zgc:113413 209.95 1573.94
99. rps4x ENSDARG00000014690 209.23 1568.54 ribosomal protein S4 X-linked [Source:ZFIN;Acc:ZDB-GENE-040927-19]
100. faua ENSDARG00000099022 207.78 1557.67 Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed a [Source:ZFIN;Acc:ZDB-GENE-040426-1700]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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