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Experiment Zebrafish_28hpf_whole2, section s38.

Sample reads: 133,396. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. AC024175.4 AC024175.4 4077.80 30569.20
2. krt4 ENSDARG00000017624, ENSDARG00000115790 3531.51 26473.94 keratin 4 [Source:ZFIN;Acc:ZDB-GENE-000607-83]
3. tpma ENSDARG00000033683 2640.77 19796.51 alpha-tropomyosin [Source:ZFIN;Acc:ZDB-GENE-990415-269]
4. ckmb ENSDARG00000040565 2041.82 15306.49 creatine kinase, muscle b [Source:ZFIN;Acc:ZDB-GENE-040426-2128]
5. mt-co2 ENSDARG00000063908 1932.13 14484.20 cytochrome c oxidase II, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-15]
6. mt-nd2 ENSDARG00000063899 1711.27 12828.52 NADH dehydrogenase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-8]
7. mt-nd4 ENSDARG00000063917 1562.08 11710.12 NADH dehydrogenase 4, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-10]
8. ckma ENSDARG00000035327, ENSDARG00000114671 1535.03 11507.34 creatine kinase, muscle a [Source:ZFIN;Acc:ZDB-GENE-980526-109]
9. mt-atp6 ENSDARG00000063911 1383.64 10372.45 ATP synthase 6, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-18]
10. tmsb4x ENSDARG00000077777 1265.17 9484.34 thymosin beta 4 X-linked [Source:ZFIN;Acc:ZDB-GENE-030131-8304]
11. atp2a1 ENSDARG00000020574 1253.47 9396.63 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 1 [Source:ZFIN;Acc:ZDB-GENE-020905-1]
12. pvalb2 ENSDARG00000002768, ENSDARG00000114085 1111.60 8333.10 parvalbumin 2 [Source:ZFIN;Acc:ZDB-GENE-000322-4]
13. mylpfa ENSDARG00000053254, ENSDARG00000112448, ENSDARG00000113256 1107.21 8300.19 myosin light chain, phosphorylatable, fast skeletal muscle a [Source:ZFIN;Acc:ZDB-GENE-990712-15]
14. actc1b ENSDARG00000099197 1052.36 7889.01 actin, alpha, cardiac muscle 1b [Source:ZFIN;Acc:ZDB-GENE-000322-1]
15. mylz3 ENSDARG00000017441 1033.34 7746.43 myosin, light polypeptide 3, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-000322-6]
16. myhz1.3 ENSDARG00000067997 975.57 7313.35 myosin, heavy polypeptide 1.3, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-070705-74]
17. mt-co3 ENSDARG00000063912 956.56 7170.85 cytochrome c oxidase III, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-16]
18. tnnc2 ENSDARG00000070835, ENSDARG00000111155 899.51 6743.17 troponin C type 2 (fast) [Source:ZFIN;Acc:ZDB-GENE-000322-2]
19. eef1a1l1 ENSDARG00000020850 878.31 6584.24 eukaryotic translation elongation factor 1 alpha 1, like 1 [Source:ZFIN;Acc:ZDB-GENE-990415-52]
20. mt-nd1 ENSDARG00000063895 835.89 6266.24 NADH dehydrogenase 1, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-7]
21. apoa1b ENSDARG00000101324 835.16 6260.77 apolipoprotein A-Ib [Source:ZFIN;Acc:ZDB-GENE-050302-172]
22. si:dkey-151g10.6 si:dkey-151g10.6 826.38 6194.95
23. actb2 ENSDARG00000037870 756.91 5674.17 actin, beta 2 [Source:ZFIN;Acc:ZDB-GENE-000329-3]
24. acta1b ENSDARG00000055618 685.24 5136.90 actin, alpha 1b, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-030131-55]
25. mt-cyb ENSDARG00000063924 666.96 4999.86 cytochrome b, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-17]
26. apoc1l apoc1l 661.11 4956.01
27. apoa2 ENSDARG00000015866 642.09 4813.42 apolipoprotein A-II [Source:ZFIN;Acc:ZDB-GENE-030131-1046]
28. actb1 ENSDARG00000037746, ENSDARG00000113649 620.88 4654.42 actin, beta 1 [Source:ZFIN;Acc:ZDB-GENE-000329-1]
29. zgc:161979 zgc:161979 613.57 4599.62
30. rpl23 ENSDARG00000053457 596.02 4468.06 ribosomal protein L23 [Source:ZFIN;Acc:ZDB-GENE-030131-8756]
31. ppiaa ENSDARG00000009212 580.66 4352.91 peptidylprolyl isomerase Aa (cyclophilin A) [Source:ZFIN;Acc:ZDB-GENE-030131-8556]
32. apobb apobb 571.89 4287.17
33. myl1 ENSDARG00000014196 571.89 4287.17 myosin, light chain 1, alkali; skeletal, fast [Source:ZFIN;Acc:ZDB-GENE-030131-8109]
34. zgc:161979_1 zgc:161979_1 568.96 4265.20
35. apoeb ENSDARG00000040295 503.14 3771.79 apolipoprotein Eb [Source:ZFIN;Acc:ZDB-GENE-980526-368]
36. hmga1a ENSDARG00000028335 457.07 3426.42 high mobility group AT-hook 1a [Source:ZFIN;Acc:ZDB-GENE-010502-1]
37. rpl10a ENSDARG00000042905, ENSDARG00000115649 453.41 3398.98 ribosomal protein L10a [Source:ZFIN;Acc:ZDB-GENE-030131-2025]
38. si:ch211-226o13.2 443.91 3327.77 si:ch211-226o13.2
39. aldoab ENSDARG00000034470 432.21 3240.06 aldolase a, fructose-bisphosphate, b [Source:ZFIN;Acc:ZDB-GENE-040426-2299]
40. rpl8 ENSDARG00000014867 407.34 3053.62 ribosomal protein L8 [Source:ZFIN;Acc:ZDB-GENE-040426-1670]
41. eef2b ENSDARG00000100371, ENSDARG00000109247 403.68 3026.18 eukaryotic translation elongation factor 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5128]
42. tnnt3a ENSDARG00000030270 403.68 3026.18 troponin T type 3a (skeletal, fast) [Source:ZFIN;Acc:ZDB-GENE-000322-3]
43. tnni2a.4 ENSDARG00000029069 402.22 3015.24 troponin I type 2a (skeletal, fast), tandem duplicate 4 [Source:ZFIN;Acc:ZDB-GENE-040625-119]
44. rpl21 ENSDARG00000010516, ENSDARG00000110263 387.60 2905.64 ribosomal protein L21 [Source:ZFIN;Acc:ZDB-GENE-030131-8512]
45. tnnt3b ENSDARG00000068457 374.43 2806.91 troponin T type 3b (skeletal, fast) [Source:ZFIN;Acc:ZDB-GENE-030520-2]
46. acta1a ENSDARG00000036371 373.70 2801.44 actin, alpha 1a, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-050417-267]
47. zgc:66286 zgc:66286 372.97 2795.97
48. zgc:112425 zgc:112425 366.39 2746.64
49. hspa8 ENSDARG00000068992, ENSDARG00000114726 365.66 2741.17 heat shock protein 8 [Source:ZFIN;Acc:ZDB-GENE-990415-92]
50. ttna ttna 364.19 2730.15
51. rps23 ENSDARG00000021838 363.46 2724.68 ribosomal protein S23 [Source:ZFIN;Acc:ZDB-GENE-080220-50]
52. rps27a ENSDARG00000032725, ENSDARG00000114059 359.07 2691.77 ribosomal protein S27a [Source:ZFIN;Acc:ZDB-GENE-030131-10018]
53. rpl36a ENSDARG00000058105, ENSDARG00000112656 353.22 2647.91 ribosomal protein L36A [Source:ZFIN;Acc:ZDB-GENE-020423-1]
54. zgc:92533 zgc:92533 348.84 2615.08
55. rpl26 ENSDARG00000102317 344.45 2582.17 ribosomal protein L26 [Source:ZFIN;Acc:ZDB-GENE-040426-2117]
56. btf3 ENSDARG00000035400, ENSDARG00000116462 342.25 2565.67 basic transcription factor 3 [Source:ZFIN;Acc:ZDB-GENE-030131-8731]
57. rplp1 ENSDARG00000021864 329.82 2472.49 ribosomal protein, large, P1 [Source:ZFIN;Acc:ZDB-GENE-030131-8663]
58. myl10 ENSDARG00000062592 324.70 2434.11 myosin, light chain 10, regulatory [Source:ZFIN;Acc:ZDB-GENE-050417-421]
59. tnni2b.1 ENSDARG00000035958 320.31 2401.20 troponin I type 2b (skeletal, fast), tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-050417-49]
60. rps26l ENSDARG00000030408 319.58 2395.73 ribosomal protein S26, like [Source:ZFIN;Acc:ZDB-GENE-040426-1706]
61. tpm3 ENSDARG00000005162 315.20 2362.89 tropomyosin 3 [Source:ZFIN;Acc:ZDB-GENE-030826-16]
62. mt-co1 ENSDARG00000063905 299.11 2242.28 cytochrome c oxidase I, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-14]
63. rpl18a ENSDARG00000025073 294.72 2209.37 ribosomal protein L18a [Source:ZFIN;Acc:ZDB-GENE-040426-1071]
64. cyt1l ENSDARG00000036832 289.60 2170.98 type I cytokeratin, enveloping layer, like [Source:ZFIN;Acc:ZDB-GENE-061026-4]
65. mylpfb ENSDARG00000002589 287.41 2154.57 myosin light chain, phosphorylatable, fast skeletal muscle b [Source:ZFIN;Acc:ZDB-GENE-040912-115]
66. apoa1a ENSDARG00000012076, ENSDARG00000110395 283.02 2121.66 apolipoprotein A-Ia [Source:ZFIN;Acc:ZDB-GENE-990415-14]
67. eif5a ENSDARG00000017235 277.90 2083.28 eukaryotic translation initiation factor 5A [Source:ZFIN;Acc:ZDB-GENE-040426-2229]
68. rpl9 ENSDARG00000037350, ENSDARG00000112384 276.44 2072.33 ribosomal protein L9 [Source:ZFIN;Acc:ZDB-GENE-030131-8646]
69. rpl19 ENSDARG00000013307 267.66 2006.51 ribosomal protein L19 [Source:ZFIN;Acc:ZDB-GENE-040426-2290]
70. pvalb1 ENSDARG00000037789 266.93 2001.04 parvalbumin 1 [Source:ZFIN;Acc:ZDB-GENE-040625-57]
71. rps20 ENSDARG00000036044 264.74 1984.62 ribosomal protein S20 [Source:ZFIN;Acc:ZDB-GENE-040426-2284]
72. rpl27 ENSDARG00000015128 263.27 1973.60 ribosomal protein L27 [Source:ZFIN;Acc:ZDB-GENE-030131-4343]
73. rpl36 ENSDARG00000100588 258.88 1940.69 ribosomal protein L36 [Source:ZFIN;Acc:ZDB-GENE-040622-2]
74. rps14 ENSDARG00000036629 258.88 1940.69 ribosomal protein S14 [Source:ZFIN;Acc:ZDB-GENE-030131-8631]
75. myhz1.1 ENSDARG00000067990, ENSDARG00000102414 257.42 1929.75 myosin, heavy polypeptide 1.1, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-000322-5]
76. zgc:153129 zgc:153129 251.57 1885.89
77. ptmab ENSDARG00000101766 250.84 1880.42 prothymosin alpha b [Source:ZFIN;Acc:ZDB-GENE-030131-8681]
78. rplp0 ENSDARG00000051783 242.06 1814.60 ribosomal protein, large, P0 [Source:ZFIN;Acc:ZDB-GENE-000629-1]
79. rpl11 ENSDARG00000043509 239.14 1792.71 ribosomal protein L11 [Source:ZFIN;Acc:ZDB-GENE-040625-147]
80. rps5 ENSDARG00000043453 236.21 1770.75 ribosomal protein S5 [Source:ZFIN;Acc:ZDB-GENE-020419-12]
81. rps2 ENSDARG00000077291 234.02 1754.33 ribosomal protein S2 [Source:ZFIN;Acc:ZDB-GENE-040426-2454]
82. cfl1l ENSDARG00000012972 228.90 1715.95 cofilin 1 (non-muscle), like [Source:ZFIN;Acc:ZDB-GENE-040426-2770]
83. rps29 ENSDARG00000041232 223.05 1672.09 ribosomal protein S29 [Source:ZFIN;Acc:ZDB-GENE-040622-5]
84. rps9 ENSDARG00000011405, ENSDARG00000113248 220.13 1650.20 ribosomal protein S9 [Source:ZFIN;Acc:ZDB-GENE-010724-15]
85. rpl18 ENSDARG00000029533 217.93 1633.71 ribosomal protein L18 [Source:ZFIN;Acc:ZDB-GENE-040801-165]
86. rps15a ENSDARG00000010160 215.74 1617.29 ribosomal protein S15a [Source:ZFIN;Acc:ZDB-GENE-030131-8708]
87. rps15 ENSDARG00000070849, ENSDARG00000110979 215.01 1611.82 ribosomal protein S15 [Source:ZFIN;Acc:ZDB-GENE-030131-9092]
88. rps19 ENSDARG00000030602 215.01 1611.82 ribosomal protein S19 [Source:ZFIN;Acc:ZDB-GENE-040426-1716]
89. ttnb ttnb 215.01 1611.82
90. nme2b.2 ENSDARG00000099420 213.54 1600.80 NME/NM23 nucleoside diphosphate kinase 2b, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-000210-33]
91. rpl7 ENSDARG00000007320 212.81 1595.33 ribosomal protein L7 [Source:ZFIN;Acc:ZDB-GENE-030131-8654]
92. fabp3 ENSDARG00000023290 208.42 1562.42 fatty acid binding protein 3, muscle and heart [Source:ZFIN;Acc:ZDB-GENE-020318-2]
93. rps12 ENSDARG00000036875, ENSDARG00000115157 204.77 1535.06 ribosomal protein S12 [Source:ZFIN;Acc:ZDB-GENE-030131-8951]
94. rplp2l ENSDARG00000011201 201.11 1507.62 ribosomal protein, large P2, like [Source:ZFIN;Acc:ZDB-GENE-070327-2]
95. faua ENSDARG00000099022 199.65 1496.67 Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed a [Source:ZFIN;Acc:ZDB-GENE-040426-1700]
96. rpl15 ENSDARG00000009285 198.19 1485.73 ribosomal protein L15 [Source:ZFIN;Acc:ZDB-GENE-040801-183]
97. rbp4 ENSDARG00000101199 196.72 1474.71 retinol binding protein 4, plasma [Source:ZFIN;Acc:ZDB-GENE-000210-19]
98. rpl6 ENSDARG00000058451 195.99 1469.24 ribosomal protein L6 [Source:ZFIN;Acc:ZDB-GENE-030131-8671]
99. rps27.1 ENSDARG00000023298 195.99 1469.24 ribosomal protein S27, isoform 1 [Source:ZFIN;Acc:ZDB-GENE-050522-549]
100. RPL29 ENSDARG00000077717 193.07 1447.35 ribosomal protein L29 [Source:ZFIN;Acc:ZDB-GENE-040801-167]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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