Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Zebrafish_28hpf_whole2, section s30.

Sample reads: 133,414. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. AC024175.4 AC024175.4 18800.01 140917.03
2. krt4 ENSDARG00000017624, ENSDARG00000115790 4468.17 33491.54 keratin 4 [Source:ZFIN;Acc:ZDB-GENE-000607-83]
3. apoa1b ENSDARG00000101324 2243.08 16813.19 apolipoprotein A-Ib [Source:ZFIN;Acc:ZDB-GENE-050302-172]
4. apoc1l apoc1l 1712.36 12835.14
5. mt-co2 ENSDARG00000063908 1530.01 11468.32 cytochrome c oxidase II, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-15]
6. tmsb4x ENSDARG00000077777 1508.74 11308.89 thymosin beta 4 X-linked [Source:ZFIN;Acc:ZDB-GENE-030131-8304]
7. apobb apobb 1503.02 11266.01
8. zgc:161979_1 zgc:161979_1 1420.43 10646.95
9. apoa2 ENSDARG00000015866 1319.84 9892.97 apolipoprotein A-II [Source:ZFIN;Acc:ZDB-GENE-030131-1046]
10. mt-nd4 ENSDARG00000063917 1296.95 9721.40 NADH dehydrogenase 4, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-10]
11. mt-nd2 ENSDARG00000063899 1291.22 9678.45 NADH dehydrogenase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-8]
12. mt-atp6 ENSDARG00000063911 1245.43 9335.22 ATP synthase 6, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-18]
13. zgc:161979 zgc:161979 1207.81 9053.24
14. apoeb ENSDARG00000040295 1202.09 9010.36 apolipoprotein Eb [Source:ZFIN;Acc:ZDB-GENE-980526-368]
15. tpma ENSDARG00000033683 974.75 7306.32 alpha-tropomyosin [Source:ZFIN;Acc:ZDB-GENE-990415-269]
16. apoa4 apoa4 841.46 6307.23
17. ckmb ENSDARG00000040565 821.02 6154.02 creatine kinase, muscle b [Source:ZFIN;Acc:ZDB-GENE-040426-2128]
18. mt-co3 ENSDARG00000063912 803.03 6019.18 cytochrome c oxidase III, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-16]
19. actb2 ENSDARG00000037870 788.31 5908.84 actin, beta 2 [Source:ZFIN;Acc:ZDB-GENE-000329-3]
20. apoa1a ENSDARG00000012076, ENSDARG00000110395 788.31 5908.84 apolipoprotein A-Ia [Source:ZFIN;Acc:ZDB-GENE-990415-14]
21. mt-nd1 ENSDARG00000063895 707.35 5302.00 NADH dehydrogenase 1, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-7]
22. bhmt ENSDARG00000013430 659.10 4940.34 betaine-homocysteine methyltransferase [Source:ZFIN;Acc:ZDB-GENE-030131-947]
23. atp2a1 ENSDARG00000020574 650.11 4872.95 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 1 [Source:ZFIN;Acc:ZDB-GENE-020905-1]
24. mt-cyb ENSDARG00000063924 634.57 4756.47 cytochrome b, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-17]
25. pvalb2 ENSDARG00000002768, ENSDARG00000114085 603.50 4523.58 parvalbumin 2 [Source:ZFIN;Acc:ZDB-GENE-000322-4]
26. ckma ENSDARG00000035327, ENSDARG00000114671 560.16 4198.73 creatine kinase, muscle a [Source:ZFIN;Acc:ZDB-GENE-980526-109]
27. mylz3 ENSDARG00000017441 559.34 4192.58 myosin, light polypeptide 3, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-000322-6]
28. hbae3 ENSDARG00000079305 532.35 3990.27 hemoglobin alpha embryonic-3 [Source:ZFIN;Acc:ZDB-GENE-990706-3]
29. mylpfa ENSDARG00000053254, ENSDARG00000112448, ENSDARG00000113256 519.27 3892.23 myosin light chain, phosphorylatable, fast skeletal muscle a [Source:ZFIN;Acc:ZDB-GENE-990712-15]
30. fabp2 ENSDARG00000006427, ENSDARG00000110230 505.37 3788.04 fatty acid binding protein 2, intestinal [Source:ZFIN;Acc:ZDB-GENE-991019-5]
31. actb1 ENSDARG00000037746, ENSDARG00000113649 500.46 3751.24 actin, beta 1 [Source:ZFIN;Acc:ZDB-GENE-000329-1]
32. hbbe3 ENSDARG00000038147, ENSDARG00000109344 464.48 3481.55 hemoglobin beta embryonic-3 [Source:ZFIN;Acc:ZDB-GENE-980526-287]
33. actc1b ENSDARG00000099197 461.21 3457.04 actin, alpha, cardiac muscle 1b [Source:ZFIN;Acc:ZDB-GENE-000322-1]
34. zgc:153129 zgc:153129 457.12 3426.38
35. eef1a1l1 ENSDARG00000020850 416.23 3119.89 eukaryotic translation elongation factor 1 alpha 1, like 1 [Source:ZFIN;Acc:ZDB-GENE-990415-52]
36. zgc:112425 zgc:112425 381.89 2862.49
37. hmga1a ENSDARG00000028335 370.44 2776.66 high mobility group AT-hook 1a [Source:ZFIN;Acc:ZDB-GENE-010502-1]
38. si:dkey-151g10.6 si:dkey-151g10.6 363.90 2727.64
39. tnnc2 ENSDARG00000070835, ENSDARG00000111155 363.90 2727.64 troponin C type 2 (fast) [Source:ZFIN;Acc:ZDB-GENE-000322-2]
40. zgc:92533 zgc:92533 350.81 2629.53
41. eef2b ENSDARG00000100371, ENSDARG00000109247 349.18 2617.31 eukaryotic translation elongation factor 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5128]
42. ppiaa ENSDARG00000009212 336.09 2519.19 peptidylprolyl isomerase Aa (cyclophilin A) [Source:ZFIN;Acc:ZDB-GENE-030131-8556]
43. ctsla ENSDARG00000007836 326.28 2445.66 cathepsin La [Source:ZFIN;Acc:ZDB-GENE-030131-106]
44. hbbe1.1 ENSDARG00000113599 321.37 2408.86 hemoglobin beta embryonic-1.1 [Source:ZFIN;Acc:ZDB-GENE-030616-7]
45. zgc:113413 zgc:113413 318.92 2390.49
46. cyt1l ENSDARG00000036832 294.39 2206.62 type I cytokeratin, enveloping layer, like [Source:ZFIN;Acc:ZDB-GENE-061026-4]
47. mt-co1 ENSDARG00000063905 286.21 2145.31 cytochrome c oxidase I, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-14]
48. gatm ENSDARG00000036239 282.12 2114.65 glycine amidinotransferase (L-arginine:glycine amidinotransferase) [Source:ZFIN;Acc:ZDB-GENE-021015-1]
49. sepp1a 264.95 1985.95 selenoprotein P, plasma, 1a
50. rbp4 ENSDARG00000101199 259.23 1943.08 retinol binding protein 4, plasma [Source:ZFIN;Acc:ZDB-GENE-000210-19]
51. hbae1_1 252.68 1893.98 hemoglobin, alpha embryonic 1
52. apoc2 ENSDARG00000092155 251.05 1881.77 apolipoprotein C-II [Source:ZFIN;Acc:ZDB-GENE-030131-2168]
53. acta1b ENSDARG00000055618 249.41 1869.47 actin, alpha 1b, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-030131-55]
54. fetub ENSDARG00000053973 248.60 1863.40 fetuin B [Source:ZFIN;Acc:ZDB-GENE-050208-4]
55. hspa8 ENSDARG00000068992, ENSDARG00000114726 248.60 1863.40 heat shock protein 8 [Source:ZFIN;Acc:ZDB-GENE-990415-92]
56. rpl10a ENSDARG00000042905, ENSDARG00000115649 242.87 1820.45 ribosomal protein L10a [Source:ZFIN;Acc:ZDB-GENE-030131-2025]
57. ttna ttna 238.78 1789.80
58. btf3 ENSDARG00000035400, ENSDARG00000116462 237.15 1777.58 basic transcription factor 3 [Source:ZFIN;Acc:ZDB-GENE-030131-8731]
59. rpl8 ENSDARG00000014867 233.88 1753.07 ribosomal protein L8 [Source:ZFIN;Acc:ZDB-GENE-040426-1670]
60. pla2g12b ENSDARG00000015662 228.97 1716.26 phospholipase A2, group XIIB [Source:ZFIN;Acc:ZDB-GENE-040426-2771]
61. rps27a ENSDARG00000032725, ENSDARG00000114059 228.97 1716.26 ribosomal protein S27a [Source:ZFIN;Acc:ZDB-GENE-030131-10018]
62. pvalb1 ENSDARG00000037789 223.25 1673.39 parvalbumin 1 [Source:ZFIN;Acc:ZDB-GENE-040625-57]
63. rps26l ENSDARG00000030408 211.80 1587.56 ribosomal protein S26, like [Source:ZFIN;Acc:ZDB-GENE-040426-1706]
64. pabpc1a ENSDARG00000017219 206.89 1550.76 poly(A) binding protein, cytoplasmic 1a [Source:ZFIN;Acc:ZDB-GENE-030131-3238]
65. rpl18a ENSDARG00000025073 204.44 1532.40 ribosomal protein L18a [Source:ZFIN;Acc:ZDB-GENE-040426-1071]
66. aldoab ENSDARG00000034470 201.17 1507.89 aldolase a, fructose-bisphosphate, b [Source:ZFIN;Acc:ZDB-GENE-040426-2299]
67. rpl23 ENSDARG00000053457 198.71 1489.45 ribosomal protein L23 [Source:ZFIN;Acc:ZDB-GENE-030131-8756]
68. rpl26 ENSDARG00000102317 198.71 1489.45 ribosomal protein L26 [Source:ZFIN;Acc:ZDB-GENE-040426-2117]
69. ptmab ENSDARG00000101766 197.89 1483.30 prothymosin alpha b [Source:ZFIN;Acc:ZDB-GENE-030131-8681]
70. tnnt3a ENSDARG00000030270 197.08 1477.23 troponin T type 3a (skeletal, fast) [Source:ZFIN;Acc:ZDB-GENE-000322-3]
71. si:ch211-226o13.2 196.26 1471.08 si:ch211-226o13.2
72. paics ENSDARG00000033539 192.17 1440.43 phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoimidazole succinocarboxamide synthetase [Source:ZFIN;Acc:ZDB-GENE-030131-9762]
73. eif5a ENSDARG00000017235 190.54 1428.21 eukaryotic translation initiation factor 5A [Source:ZFIN;Acc:ZDB-GENE-040426-2229]
74. rps20 ENSDARG00000036044 190.54 1428.21 ribosomal protein S20 [Source:ZFIN;Acc:ZDB-GENE-040426-2284]
75. rpl21 ENSDARG00000010516, ENSDARG00000110263 188.90 1415.92 ribosomal protein L21 [Source:ZFIN;Acc:ZDB-GENE-030131-8512]
76. si:dkey-150i13.2 ENSDARG00000071052 188.90 1415.92 si:dkey-150i13.2 [Source:ZFIN;Acc:ZDB-GENE-090312-157]
77. rplp1 ENSDARG00000021864 188.08 1409.77 ribosomal protein, large, P1 [Source:ZFIN;Acc:ZDB-GENE-030131-8663]
78. rps23 ENSDARG00000021838 182.36 1366.89 ribosomal protein S23 [Source:ZFIN;Acc:ZDB-GENE-080220-50]
79. tnnt3b ENSDARG00000068457 181.54 1360.75 troponin T type 3b (skeletal, fast) [Source:ZFIN;Acc:ZDB-GENE-030520-2]
80. rpl36 ENSDARG00000100588 180.72 1354.60 ribosomal protein L36 [Source:ZFIN;Acc:ZDB-GENE-040622-2]
81. pvalb9 ENSDARG00000071601, ENSDARG00000113946 177.45 1330.09 parvalbumin 9 [Source:ZFIN;Acc:ZDB-GENE-030805-4]
82. rpl36a ENSDARG00000058105, ENSDARG00000112656 176.63 1323.94 ribosomal protein L36A [Source:ZFIN;Acc:ZDB-GENE-020423-1]
83. ttnb ttnb 170.91 1281.07
84. myhz1.3 ENSDARG00000067997 168.46 1262.71 myosin, heavy polypeptide 1.3, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-070705-74]
85. tfa ENSDARG00000016771 162.73 1219.76 transferrin-a [Source:ZFIN;Acc:ZDB-GENE-980526-35]
86. myl1 ENSDARG00000014196 158.64 1189.10 myosin, light chain 1, alkali; skeletal, fast [Source:ZFIN;Acc:ZDB-GENE-030131-8109]
87. acta1a ENSDARG00000036371 157.01 1176.88 actin, alpha 1a, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-050417-267]
88. myhz1.1 ENSDARG00000067990, ENSDARG00000102414 157.01 1176.88 myosin, heavy polypeptide 1.1, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-000322-5]
89. pfn1 ENSDARG00000088091 157.01 1176.88 profilin 1 [Source:ZFIN;Acc:ZDB-GENE-031002-33]
90. cfl1l ENSDARG00000012972 156.19 1170.74 cofilin 1 (non-muscle), like [Source:ZFIN;Acc:ZDB-GENE-040426-2770]
91. rpl9 ENSDARG00000037350, ENSDARG00000112384 151.28 1133.93 ribosomal protein L9 [Source:ZFIN;Acc:ZDB-GENE-030131-8646]
92. psap ENSDARG00000013968 149.65 1121.71 prosaposin [Source:ZFIN;Acc:ZDB-GENE-020108-1]
93. rpl19 ENSDARG00000013307 145.56 1091.06 ribosomal protein L19 [Source:ZFIN;Acc:ZDB-GENE-040426-2290]
94. gamt ENSDARG00000070844, ENSDARG00000109945 143.92 1078.76 guanidinoacetate N-methyltransferase [Source:ZFIN;Acc:ZDB-GENE-051030-97]
95. rpsa ENSDARG00000019181 143.92 1078.76 ribosomal protein SA [Source:ZFIN;Acc:ZDB-GENE-040426-811]
96. rps2 ENSDARG00000077291 143.11 1072.69 ribosomal protein S2 [Source:ZFIN;Acc:ZDB-GENE-040426-2454]
97. ahcy ENSDARG00000005191 141.47 1060.40 adenosylhomocysteinase [Source:ZFIN;Acc:ZDB-GENE-031219-6]
98. rplp2 ENSDARG00000101406 140.65 1054.25 ribosomal protein, large P2 [Source:ZFIN;Acc:ZDB-GENE-031018-2]
99. tpm3 ENSDARG00000005162 139.83 1048.11 tropomyosin 3 [Source:ZFIN;Acc:ZDB-GENE-030826-16]
100. icn ENSDARG00000009978 137.38 1029.74 ictacalcin [Source:ZFIN;Acc:ZDB-GENE-030131-8599]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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