Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Zebrafish_28hpf_whole2, section s28.

Sample reads: 133,382. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. AC024175.4 AC024175.4 13904.02 104242.48
2. krt4 ENSDARG00000017624, ENSDARG00000115790 3772.96 28286.98 keratin 4 [Source:ZFIN;Acc:ZDB-GENE-000607-83]
3. apoa1b ENSDARG00000101324 2090.12 15670.24 apolipoprotein A-Ib [Source:ZFIN;Acc:ZDB-GENE-050302-172]
4. apoc1l apoc1l 1555.80 11664.29
5. tmsb4x ENSDARG00000077777 1460.20 10947.54 thymosin beta 4 X-linked [Source:ZFIN;Acc:ZDB-GENE-030131-8304]
6. tpma ENSDARG00000033683 1347.58 10103.20 alpha-tropomyosin [Source:ZFIN;Acc:ZDB-GENE-990415-269]
7. mt-atp6 ENSDARG00000063911 1342.99 10068.79 ATP synthase 6, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-18]
8. apobb apobb 1324.01 9926.49
9. mt-co2 ENSDARG00000063908 1299.12 9739.88 cytochrome c oxidase II, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-15]
10. zgc:161979_1 zgc:161979_1 1218.58 9136.05
11. mt-nd2 ENSDARG00000063899 1189.12 8915.18 NADH dehydrogenase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-8]
12. apoa2 ENSDARG00000015866 1117.74 8380.02 apolipoprotein A-II [Source:ZFIN;Acc:ZDB-GENE-030131-1046]
13. zgc:161979 zgc:161979 1104.65 8281.88
14. apoeb ENSDARG00000040295 1062.74 7967.67 apolipoprotein Eb [Source:ZFIN;Acc:ZDB-GENE-980526-368]
15. mt-nd4 ENSDARG00000063917 1042.44 7815.48 NADH dehydrogenase 4, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-10]
16. ckmb ENSDARG00000040565 889.22 6666.74 creatine kinase, muscle b [Source:ZFIN;Acc:ZDB-GENE-040426-2128]
17. actb2 ENSDARG00000037870 819.15 6141.41 actin, beta 2 [Source:ZFIN;Acc:ZDB-GENE-000329-3]
18. mt-co3 ENSDARG00000063912 813.92 6102.20 cytochrome c oxidase III, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-16]
19. atp2a1 ENSDARG00000020574 808.68 6062.91 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 1 [Source:ZFIN;Acc:ZDB-GENE-020905-1]
20. ckma ENSDARG00000035327, ENSDARG00000114671 750.40 5625.97 creatine kinase, muscle a [Source:ZFIN;Acc:ZDB-GENE-980526-109]
21. apoa4 apoa4 730.10 5473.77
22. apoa1a ENSDARG00000012076, ENSDARG00000110395 718.32 5385.45 apolipoprotein A-Ia [Source:ZFIN;Acc:ZDB-GENE-990415-14]
23. mt-nd1 ENSDARG00000063895 677.72 5081.06 NADH dehydrogenase 1, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-7]
24. pvalb2 ENSDARG00000002768, ENSDARG00000114085 663.31 4973.03 parvalbumin 2 [Source:ZFIN;Acc:ZDB-GENE-000322-4]
25. mylz3 ENSDARG00000017441 631.88 4737.39 myosin, light polypeptide 3, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-000322-6]
26. mt-cyb ENSDARG00000063924 593.90 4452.64 cytochrome b, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-17]
27. eef1a1l1 ENSDARG00000020850 563.78 4226.82 eukaryotic translation elongation factor 1 alpha 1, like 1 [Source:ZFIN;Acc:ZDB-GENE-990415-52]
28. bhmt ENSDARG00000013430 551.34 4133.56 betaine-homocysteine methyltransferase [Source:ZFIN;Acc:ZDB-GENE-030131-947]
29. actc1b ENSDARG00000099197 523.84 3927.38 actin, alpha, cardiac muscle 1b [Source:ZFIN;Acc:ZDB-GENE-000322-1]
30. mylpfa ENSDARG00000053254, ENSDARG00000112448, ENSDARG00000113256 521.22 3907.74 myosin light chain, phosphorylatable, fast skeletal muscle a [Source:ZFIN;Acc:ZDB-GENE-990712-15]
31. zgc:112425 zgc:112425 515.98 3868.45
32. hbbe3 ENSDARG00000038147, ENSDARG00000109344 508.78 3814.47 hemoglobin beta embryonic-3 [Source:ZFIN;Acc:ZDB-GENE-980526-287]
33. actb1 ENSDARG00000037746, ENSDARG00000113649 493.06 3696.61 actin, beta 1 [Source:ZFIN;Acc:ZDB-GENE-000329-1]
34. si:dkey-151g10.6 si:dkey-151g10.6 451.16 3382.48
35. fabp2 ENSDARG00000006427, ENSDARG00000110230 450.50 3377.53 fatty acid binding protein 2, intestinal [Source:ZFIN;Acc:ZDB-GENE-991019-5]
36. hmga1a ENSDARG00000028335 447.23 3353.01 high mobility group AT-hook 1a [Source:ZFIN;Acc:ZDB-GENE-010502-1]
37. tnnc2 ENSDARG00000070835, ENSDARG00000111155 440.68 3303.91 troponin C type 2 (fast) [Source:ZFIN;Acc:ZDB-GENE-000322-2]
38. zgc:153129 zgc:153129 388.95 2916.07
39. zgc:92533 zgc:92533 366.03 2744.23
40. ppiaa ENSDARG00000009212 360.14 2700.07 peptidylprolyl isomerase Aa (cyclophilin A) [Source:ZFIN;Acc:ZDB-GENE-030131-8556]
41. hbae3 ENSDARG00000079305 354.25 2655.92 hemoglobin alpha embryonic-3 [Source:ZFIN;Acc:ZDB-GENE-990706-3]
42. eef2b ENSDARG00000100371, ENSDARG00000109247 347.70 2606.81 eukaryotic translation elongation factor 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5128]
43. hspa8 ENSDARG00000068992, ENSDARG00000114726 305.14 2287.72 heat shock protein 8 [Source:ZFIN;Acc:ZDB-GENE-990415-92]
44. acta1b ENSDARG00000055618 299.90 2248.44 actin, alpha 1b, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-030131-55]
45. ptmab ENSDARG00000101766 297.93 2233.67 prothymosin alpha b [Source:ZFIN;Acc:ZDB-GENE-030131-8681]
46. gatm ENSDARG00000036239 287.46 2155.17 glycine amidinotransferase (L-arginine:glycine amidinotransferase) [Source:ZFIN;Acc:ZDB-GENE-021015-1]
47. rpl8 ENSDARG00000014867 278.29 2086.42 ribosomal protein L8 [Source:ZFIN;Acc:ZDB-GENE-040426-1670]
48. rpl18a ENSDARG00000025073 276.98 2076.60 ribosomal protein L18a [Source:ZFIN;Acc:ZDB-GENE-040426-1071]
49. rpl10a ENSDARG00000042905, ENSDARG00000115649 275.67 2066.78 ribosomal protein L10a [Source:ZFIN;Acc:ZDB-GENE-030131-2025]
50. rpl23 ENSDARG00000053457 275.67 2066.78 ribosomal protein L23 [Source:ZFIN;Acc:ZDB-GENE-030131-8756]
51. ctsla ENSDARG00000007836 274.36 2056.96 cathepsin La [Source:ZFIN;Acc:ZDB-GENE-030131-106]
52. si:ch211-226o13.2 270.43 2027.49 si:ch211-226o13.2
53. sepp1a 263.23 1973.51 selenoprotein P, plasma, 1a
54. cyt1l ENSDARG00000036832 260.61 1953.87 type I cytokeratin, enveloping layer, like [Source:ZFIN;Acc:ZDB-GENE-061026-4]
55. zgc:113413 zgc:113413 257.34 1929.35
56. apoc2 ENSDARG00000092155 250.79 1880.25 apolipoprotein C-II [Source:ZFIN;Acc:ZDB-GENE-030131-2168]
57. rbp4 ENSDARG00000101199 247.51 1855.65 retinol binding protein 4, plasma [Source:ZFIN;Acc:ZDB-GENE-000210-19]
58. myl1 ENSDARG00000014196 244.24 1831.14 myosin, light chain 1, alkali; skeletal, fast [Source:ZFIN;Acc:ZDB-GENE-030131-8109]
59. btf3 ENSDARG00000035400, ENSDARG00000116462 243.59 1826.27 basic transcription factor 3 [Source:ZFIN;Acc:ZDB-GENE-030131-8731]
60. mt-co1 ENSDARG00000063905 243.59 1826.27 cytochrome c oxidase I, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-14]
61. pvalb1 ENSDARG00000037789 239.00 1791.85 parvalbumin 1 [Source:ZFIN;Acc:ZDB-GENE-040625-57]
62. rps27a ENSDARG00000032725, ENSDARG00000114059 236.38 1772.21 ribosomal protein S27a [Source:ZFIN;Acc:ZDB-GENE-030131-10018]
63. rpl26 ENSDARG00000102317 230.49 1728.05 ribosomal protein L26 [Source:ZFIN;Acc:ZDB-GENE-040426-2117]
64. hbbe1.1 ENSDARG00000113599 227.87 1708.41 hemoglobin beta embryonic-1.1 [Source:ZFIN;Acc:ZDB-GENE-030616-7]
65. eif5a ENSDARG00000017235 225.25 1688.76 eukaryotic translation initiation factor 5A [Source:ZFIN;Acc:ZDB-GENE-040426-2229]
66. pabpc1a ENSDARG00000017219 224.60 1683.89 poly(A) binding protein, cytoplasmic 1a [Source:ZFIN;Acc:ZDB-GENE-030131-3238]
67. fetub ENSDARG00000053973 216.74 1624.96 fetuin B [Source:ZFIN;Acc:ZDB-GENE-050208-4]
68. rps26l ENSDARG00000030408 216.74 1624.96 ribosomal protein S26, like [Source:ZFIN;Acc:ZDB-GENE-040426-1706]
69. ttna ttna 216.08 1620.01
70. tnnt3a ENSDARG00000030270 207.57 1556.21 troponin T type 3a (skeletal, fast) [Source:ZFIN;Acc:ZDB-GENE-000322-3]
71. rpl36a ENSDARG00000058105, ENSDARG00000112656 206.92 1551.34 ribosomal protein L36A [Source:ZFIN;Acc:ZDB-GENE-020423-1]
72. myhz1.3 ENSDARG00000067997 206.26 1546.39 myosin, heavy polypeptide 1.3, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-070705-74]
73. rps23 ENSDARG00000021838 204.95 1536.57 ribosomal protein S23 [Source:ZFIN;Acc:ZDB-GENE-080220-50]
74. pla2g12b ENSDARG00000015662 202.99 1521.88 phospholipase A2, group XIIB [Source:ZFIN;Acc:ZDB-GENE-040426-2771]
75. rpl21 ENSDARG00000010516, ENSDARG00000110263 201.68 1512.05 ribosomal protein L21 [Source:ZFIN;Acc:ZDB-GENE-030131-8512]
76. rpl9 ENSDARG00000037350, ENSDARG00000112384 195.79 1467.89 ribosomal protein L9 [Source:ZFIN;Acc:ZDB-GENE-030131-8646]
77. tnnt3b ENSDARG00000068457 194.48 1458.07 troponin T type 3b (skeletal, fast) [Source:ZFIN;Acc:ZDB-GENE-030520-2]
78. myhz1.1 ENSDARG00000067990, ENSDARG00000102414 189.89 1423.66 myosin, heavy polypeptide 1.1, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-000322-5]
79. rps15 ENSDARG00000070849, ENSDARG00000110979 187.93 1408.97 ribosomal protein S15 [Source:ZFIN;Acc:ZDB-GENE-030131-9092]
80. acta1a ENSDARG00000036371 181.38 1359.86 actin, alpha 1a, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-050417-267]
81. gapdh ENSDARG00000043457 180.72 1354.91 glyceraldehyde-3-phosphate dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-030115-1]
82. rpl19 ENSDARG00000013307 178.76 1340.22 ribosomal protein L19 [Source:ZFIN;Acc:ZDB-GENE-040426-2290]
83. rps14 ENSDARG00000036629 178.11 1335.34 ribosomal protein S14 [Source:ZFIN;Acc:ZDB-GENE-030131-8631]
84. rps20 ENSDARG00000036044 177.45 1330.39 ribosomal protein S20 [Source:ZFIN;Acc:ZDB-GENE-040426-2284]
85. hsp90ab1 ENSDARG00000029150 174.83 1310.75 heat shock protein 90, alpha (cytosolic), class B member 1 [Source:ZFIN;Acc:ZDB-GENE-990415-95]
86. faua ENSDARG00000099022 173.52 1300.93 Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed a [Source:ZFIN;Acc:ZDB-GENE-040426-1700]
87. aldoab ENSDARG00000034470 172.87 1296.06 aldolase a, fructose-bisphosphate, b [Source:ZFIN;Acc:ZDB-GENE-040426-2299]
88. fth1a ENSDARG00000015551 171.56 1286.24 ferritin, heavy polypeptide 1a [Source:ZFIN;Acc:ZDB-GENE-000831-2]
89. rps2 ENSDARG00000077291 170.25 1276.41 ribosomal protein S2 [Source:ZFIN;Acc:ZDB-GENE-040426-2454]
90. AL954137.2 ENSDARG00000114408 169.59 1271.47
91. hbae1_1 169.59 1271.47 hemoglobin, alpha embryonic 1
92. rpl27 ENSDARG00000015128 168.28 1261.64 ribosomal protein L27 [Source:ZFIN;Acc:ZDB-GENE-030131-4343]
93. paics ENSDARG00000033539 167.63 1256.77 phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoimidazole succinocarboxamide synthetase [Source:ZFIN;Acc:ZDB-GENE-030131-9762]
94. si:dkey-150i13.2 ENSDARG00000071052 167.63 1256.77 si:dkey-150i13.2 [Source:ZFIN;Acc:ZDB-GENE-090312-157]
95. tpm3 ENSDARG00000005162 166.97 1251.82 tropomyosin 3 [Source:ZFIN;Acc:ZDB-GENE-030826-16]
96. rpsa ENSDARG00000019181 163.70 1227.31 ribosomal protein SA [Source:ZFIN;Acc:ZDB-GENE-040426-811]
97. rplp1 ENSDARG00000021864 161.74 1212.61 ribosomal protein, large, P1 [Source:ZFIN;Acc:ZDB-GENE-030131-8663]
98. rplp2 ENSDARG00000101406 157.81 1183.15 ribosomal protein, large P2 [Source:ZFIN;Acc:ZDB-GENE-031018-2]
99. rps9 ENSDARG00000011405, ENSDARG00000113248 156.50 1173.33 ribosomal protein S9 [Source:ZFIN;Acc:ZDB-GENE-010724-15]
100. cirbp cirbp 155.84 1168.38
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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