Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Zebrafish_28hpf_whole2, section s16.

Sample reads: 133,396. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. AC024175.4 AC024175.4 8794.83 65930.79
2. zgc:112425 zgc:112425 1724.16 12925.23
3. mt-co2 ENSDARG00000063908 1559.21 11688.68 cytochrome c oxidase II, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-15]
4. krt4 ENSDARG00000017624, ENSDARG00000115790 1530.45 11473.08 keratin 4 [Source:ZFIN;Acc:ZDB-GENE-000607-83]
5. tmsb4x ENSDARG00000077777 1468.70 11010.17 thymosin beta 4 X-linked [Source:ZFIN;Acc:ZDB-GENE-030131-8304]
6. hmga1a ENSDARG00000028335 1365.50 10236.52 high mobility group AT-hook 1a [Source:ZFIN;Acc:ZDB-GENE-010502-1]
7. mt-nd2 ENSDARG00000063899 990.55 7425.70 NADH dehydrogenase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-8]
8. mt-atp6 ENSDARG00000063911 979.76 7344.81 ATP synthase 6, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-18]
9. ptmab ENSDARG00000101766 891.16 6680.62 prothymosin alpha b [Source:ZFIN;Acc:ZDB-GENE-030131-8681]
10. ppiaa ENSDARG00000009212 838.71 6287.42 peptidylprolyl isomerase Aa (cyclophilin A) [Source:ZFIN;Acc:ZDB-GENE-030131-8556]
11. si:dkey-151g10.6 si:dkey-151g10.6 837.65 6279.48
12. mt-nd4 ENSDARG00000063917 837.44 6277.90 NADH dehydrogenase 4, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-10]
13. eef1a1l1 ENSDARG00000020850 784.36 5879.99 eukaryotic translation elongation factor 1 alpha 1, like 1 [Source:ZFIN;Acc:ZDB-GENE-990415-52]
14. mt-co3 ENSDARG00000063912 782.88 5868.89 cytochrome c oxidase III, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-16]
15. actb2 ENSDARG00000037870 772.31 5789.65 actin, beta 2 [Source:ZFIN;Acc:ZDB-GENE-000329-3]
16. AL954137.2 ENSDARG00000114408 602.28 4515.02
17. hspa8 ENSDARG00000068992, ENSDARG00000114726 577.12 4326.40 heat shock protein 8 [Source:ZFIN;Acc:ZDB-GENE-990415-92]
18. eef2b ENSDARG00000100371, ENSDARG00000109247 572.04 4288.32 eukaryotic translation elongation factor 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5128]
19. mt-nd1 ENSDARG00000063895 532.71 3993.48 NADH dehydrogenase 1, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-7]
20. he1a 505.64 3790.55 hatching enzyme 1a, transcript variant X1
21. hsp90ab1 ENSDARG00000029150 475.82 3567.00 heat shock protein 90, alpha (cytosolic), class B member 1 [Source:ZFIN;Acc:ZDB-GENE-990415-95]
22. pcna ENSDARG00000054155 473.28 3547.96 proliferating cell nuclear antigen [Source:ZFIN;Acc:ZDB-GENE-000210-8]
23. rpl23 ENSDARG00000053457 469.48 3519.48 ribosomal protein L23 [Source:ZFIN;Acc:ZDB-GENE-030131-8756]
24. rpl10a ENSDARG00000042905, ENSDARG00000115649 459.11 3441.74 ribosomal protein L10a [Source:ZFIN;Acc:ZDB-GENE-030131-2025]
25. cirbp cirbp 456.15 3419.55
26. rpl18a ENSDARG00000025073 455.31 3413.25 ribosomal protein L18a [Source:ZFIN;Acc:ZDB-GENE-040426-1071]
27. mt-cyb ENSDARG00000063924 451.29 3383.11 cytochrome b, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-17]
28. actb1 ENSDARG00000037746, ENSDARG00000113649 448.96 3365.65 actin, beta 1 [Source:ZFIN;Acc:ZDB-GENE-000329-1]
29. rpl8 ENSDARG00000014867 437.12 3276.89 ribosomal protein L8 [Source:ZFIN;Acc:ZDB-GENE-040426-1670]
30. hmgn2 ENSDARG00000099572 418.51 3137.38 high mobility group nucleosomal binding domain 2 [Source:ZFIN;Acc:ZDB-GENE-051030-81]
31. rps26l ENSDARG00000030408 414.49 3107.24 ribosomal protein S26, like [Source:ZFIN;Acc:ZDB-GENE-040426-1706]
32. rps23 ENSDARG00000021838 400.11 2999.44 ribosomal protein S23 [Source:ZFIN;Acc:ZDB-GENE-080220-50]
33. rps27a ENSDARG00000032725, ENSDARG00000114059 394.61 2958.21 ribosomal protein S27a [Source:ZFIN;Acc:ZDB-GENE-030131-10018]
34. id1 ENSDARG00000040764 392.92 2945.54 inhibitor of DNA binding 1 [Source:ZFIN;Acc:ZDB-GENE-990415-96]
35. rpl21 ENSDARG00000010516, ENSDARG00000110263 384.88 2885.27 ribosomal protein L21 [Source:ZFIN;Acc:ZDB-GENE-030131-8512]
36. hnrnpab hnrnpab 364.79 2734.66
37. rplp1 ENSDARG00000021864 360.78 2704.60 ribosomal protein, large, P1 [Source:ZFIN;Acc:ZDB-GENE-030131-8663]
38. rpl36a ENSDARG00000058105, ENSDARG00000112656 352.74 2644.33 ribosomal protein L36A [Source:ZFIN;Acc:ZDB-GENE-020423-1]
39. rpl26 ENSDARG00000102317 346.82 2599.95 ribosomal protein L26 [Source:ZFIN;Acc:ZDB-GENE-040426-2117]
40. rps20 ENSDARG00000036044 340.69 2554.00 ribosomal protein S20 [Source:ZFIN;Acc:ZDB-GENE-040426-2284]
41. zgc:123194 zgc:123194 335.19 2512.76
42. hnrnpa0l ENSDARG00000036161, ENSDARG00000076380, ENSDARG00000114889 332.23 2490.58 heterogeneous nuclear ribonucleoprotein A0, like [Source:ZFIN;Acc:ZDB-GENE-030131-618]
43. h3f3a 327.15 2452.49 H3 histone, family 3A, transcript variant X1
44. cfl1 ENSDARG00000021124 315.31 2363.73 cofilin 1 [Source:ZFIN;Acc:ZDB-GENE-030131-215]
45. pabpc1a ENSDARG00000017219 306.00 2293.94 poly(A) binding protein, cytoplasmic 1a [Source:ZFIN;Acc:ZDB-GENE-030131-3238]
46. eif5a ENSDARG00000017235 305.16 2287.64 eukaryotic translation initiation factor 5A [Source:ZFIN;Acc:ZDB-GENE-040426-2229]
47. btf3 ENSDARG00000035400, ENSDARG00000116462 302.41 2267.03 basic transcription factor 3 [Source:ZFIN;Acc:ZDB-GENE-030131-8731]
48. si:dkeyp-86f7.3 si:dkeyp-86f7.3 301.35 2259.08
49. ran ENSDARG00000057026 299.24 2243.26 RAN, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-990415-88]
50. rpl36 ENSDARG00000100588 297.12 2227.37 ribosomal protein L36 [Source:ZFIN;Acc:ZDB-GENE-040622-2]
51. rps15 ENSDARG00000070849, ENSDARG00000110979 289.51 2170.32 ribosomal protein S15 [Source:ZFIN;Acc:ZDB-GENE-030131-9092]
52. fabp3 ENSDARG00000023290 279.78 2097.38 fatty acid binding protein 3, muscle and heart [Source:ZFIN;Acc:ZDB-GENE-020318-2]
53. rpl9 ENSDARG00000037350, ENSDARG00000112384 279.36 2094.23 ribosomal protein L9 [Source:ZFIN;Acc:ZDB-GENE-030131-8646]
54. rpl27 ENSDARG00000015128 277.24 2078.34 ribosomal protein L27 [Source:ZFIN;Acc:ZDB-GENE-030131-4343]
55. khdrbs1a ENSDARG00000052856 275.13 2062.52 KH domain containing, RNA binding, signal transduction associated 1a [Source:ZFIN;Acc:ZDB-GENE-000210-25]
56. rps29 ENSDARG00000041232 271.11 2032.39 ribosomal protein S29 [Source:ZFIN;Acc:ZDB-GENE-040622-5]
57. mt-co1 ENSDARG00000063905 269.00 2016.57 cytochrome c oxidase I, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-14]
58. rpl11 ENSDARG00000043509 266.88 2000.68 ribosomal protein L11 [Source:ZFIN;Acc:ZDB-GENE-040625-147]
59. rpsa ENSDARG00000019181 266.67 1999.10 ribosomal protein SA [Source:ZFIN;Acc:ZDB-GENE-040426-811]
60. rpl22 ENSDARG00000070437 266.04 1994.38 ribosomal protein L22 [Source:ZFIN;Acc:ZDB-GENE-051113-276]
61. rps5 ENSDARG00000043453 257.15 1927.74 ribosomal protein S5 [Source:ZFIN;Acc:ZDB-GENE-020419-12]
62. rpl18 ENSDARG00000029533 247.85 1858.02 ribosomal protein L18 [Source:ZFIN;Acc:ZDB-GENE-040801-165]
63. rps14 ENSDARG00000036629 244.47 1832.68 ribosomal protein S14 [Source:ZFIN;Acc:ZDB-GENE-030131-8631]
64. tuba8l4 ENSDARG00000006260 242.56 1818.36 tubulin, alpha 8 like 4 [Source:ZFIN;Acc:ZDB-GENE-040426-860]
65. ctslb ENSDARG00000039173, ENSDARG00000074306 241.72 1812.06 cathepsin Lb [Source:ZFIN;Acc:ZDB-GENE-980526-285]
66. rps12 ENSDARG00000036875, ENSDARG00000115157 241.72 1812.06 ribosomal protein S12 [Source:ZFIN;Acc:ZDB-GENE-030131-8951]
67. rps15a ENSDARG00000010160 239.60 1796.17 ribosomal protein S15a [Source:ZFIN;Acc:ZDB-GENE-030131-8708]
68. rps2 ENSDARG00000077291 238.54 1788.22 ribosomal protein S2 [Source:ZFIN;Acc:ZDB-GENE-040426-2454]
69. si:ch1073-429i10.3 238.33 1786.65 si:ch1073-429i10.3, transcript variant X2
70. RPL29 ENSDARG00000077717 238.12 1785.08 ribosomal protein L29 [Source:ZFIN;Acc:ZDB-GENE-040801-167]
71. hnrnpa0a ENSDARG00000089302 238.12 1785.08 heterogeneous nuclear ribonucleoprotein A0a [Source:ZFIN;Acc:ZDB-GENE-030131-2249]
72. fkbp1aa ENSDARG00000022684 236.01 1769.26 FK506 binding protein 1Aa [Source:ZFIN;Acc:ZDB-GENE-030131-7275]
73. rps9 ENSDARG00000011405, ENSDARG00000113248 235.79 1767.61 ribosomal protein S9 [Source:ZFIN;Acc:ZDB-GENE-010724-15]
74. eif5a2 ENSDARG00000056186 235.16 1762.89 eukaryotic translation initiation factor 5A2 [Source:ZFIN;Acc:ZDB-GENE-040426-2405]
75. rpl6 ENSDARG00000058451 233.47 1750.22 ribosomal protein L6 [Source:ZFIN;Acc:ZDB-GENE-030131-8671]
76. rplp2l ENSDARG00000011201 230.72 1729.60 ribosomal protein, large P2, like [Source:ZFIN;Acc:ZDB-GENE-070327-2]
77. marcksb ENSDARG00000008803 228.18 1710.56 myristoylated alanine-rich protein kinase C substrate b [Source:ZFIN;Acc:ZDB-GENE-030131-1921]
78. h3f3d ENSDARG00000045248 226.49 1697.89 H3 histone, family 3D [Source:ZFIN;Acc:ZDB-GENE-040426-1023]
79. rpl5b ENSDARG00000015862, ENSDARG00000109661 225.86 1693.17 ribosomal protein L5b [Source:ZFIN;Acc:ZDB-GENE-040625-93]
80. rps27.1 ENSDARG00000023298 224.16 1680.42 ribosomal protein S27, isoform 1 [Source:ZFIN;Acc:ZDB-GENE-050522-549]
81. rpl19 ENSDARG00000013307 220.15 1650.36 ribosomal protein L19 [Source:ZFIN;Acc:ZDB-GENE-040426-2290]
82. rps6 ENSDARG00000019778 219.30 1643.99 ribosomal protein S6 [Source:ZFIN;Acc:ZDB-GENE-040801-8]
83. zgc:174855 ENSDARG00000094559 217.61 1631.32 zgc:174855 [Source:ZFIN;Acc:ZDB-GENE-071004-74]
84. hbbe3 ENSDARG00000038147, ENSDARG00000109344 216.55 1623.38 hemoglobin beta embryonic-3 [Source:ZFIN;Acc:ZDB-GENE-980526-287]
85. rpl39 ENSDARG00000036316, ENSDARG00000117167 211.90 1588.52 ribosomal protein L39 [Source:ZFIN;Acc:ZDB-GENE-040625-51]
86. faua ENSDARG00000099022 211.05 1582.14 Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed a [Source:ZFIN;Acc:ZDB-GENE-040426-1700]
87. ddx5 ENSDARG00000038068 206.61 1548.86 DEAD (Asp-Glu-Ala-Asp) box helicase 5 [Source:ZFIN;Acc:ZDB-GENE-030131-925]
88. rps4x ENSDARG00000014690 202.17 1515.58 ribosomal protein S4 X-linked [Source:ZFIN;Acc:ZDB-GENE-040927-19]
89. rpl14 ENSDARG00000103433 200.69 1504.48 ribosomal protein L14 [Source:ZFIN;Acc:ZDB-GENE-030131-2085]
90. hbae3 ENSDARG00000079305 195.19 1463.25 hemoglobin alpha embryonic-3 [Source:ZFIN;Acc:ZDB-GENE-990706-3]
91. rps19 ENSDARG00000030602 192.87 1445.86 ribosomal protein S19 [Source:ZFIN;Acc:ZDB-GENE-040426-1716]
92. top1l ENSDARG00000070545 192.65 1444.21 DNA topoisomerase I, like [Source:ZFIN;Acc:ZDB-GENE-060616-217]
93. rpl7 ENSDARG00000007320 189.90 1423.59 ribosomal protein L7 [Source:ZFIN;Acc:ZDB-GENE-030131-8654]
94. si:dkey-269i1.3 184.83 1385.59 si:dkey-269i1.3
95. pnrc2 ENSDARG00000053291, ENSDARG00000112537 184.41 1382.44 proline-rich nuclear receptor coactivator 2 [Source:ZFIN;Acc:ZDB-GENE-030131-5475]
96. rpl15 ENSDARG00000009285 182.71 1369.69 ribosomal protein L15 [Source:ZFIN;Acc:ZDB-GENE-040801-183]
97. rpl28 ENSDARG00000005791 182.29 1366.54 ribosomal protein L28 [Source:ZFIN;Acc:ZDB-GENE-040930-10]
98. rpl31 ENSDARG00000053365 181.23 1358.60 ribosomal protein L31 [Source:ZFIN;Acc:ZDB-GENE-060331-121]
99. tuba8l ENSDARG00000042708 179.97 1349.15 tubulin, alpha 8 like [Source:ZFIN;Acc:ZDB-GENE-030131-9167]
100. rplp0 ENSDARG00000051783 179.75 1347.50 ribosomal protein, large, P0 [Source:ZFIN;Acc:ZDB-GENE-000629-1]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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