Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Zebrafish_28hpf_whole1, section s68.

Sample reads: 133,402. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. AC024175.4 AC024175.4 17591.52 131868.13
2. rps20 ENSDARG00000036044 5863.84 43956.04 ribosomal protein S20 [Source:ZFIN;Acc:ZDB-GENE-040426-2284]
3. glrx ENSDARG00000028106 2931.92 21978.02 glutaredoxin (thioltransferase) [Source:ZFIN;Acc:ZDB-GENE-041010-11]
4. mt-atp6 ENSDARG00000063911 2931.92 21978.02 ATP synthase 6, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-18]
5. mt-co2 ENSDARG00000063908 2931.92 21978.02 cytochrome c oxidase II, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-15]
6. rpl23 ENSDARG00000053457 2931.92 21978.02 ribosomal protein L23 [Source:ZFIN;Acc:ZDB-GENE-030131-8756]
7. rplp2l ENSDARG00000011201 2931.92 21978.02 ribosomal protein, large P2, like [Source:ZFIN;Acc:ZDB-GENE-070327-2]
8. yap1 ENSDARG00000068401, ENSDARG00000112952 2931.92 21978.02 Yes-associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9710]
9. zgc:92061 zgc:92061 2931.92 21978.02
10. BX511252.1 BX511252.1 1465.96 10989.01
11. CABZ01029822.1 ENSDARG00000086931 1465.96 10989.01 uncharacterized LOC100004582 [Source:NCBI gene;Acc:100004582]
12. HPCAL1 ENSDARG00000022763 1465.96 10989.01 hippocalcin-like 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1242]
13. NSMCE2 ENSDARG00000076379 1465.96 10989.01 NSE2 (MMS21) homolog, SMC5-SMC6 complex SUMO ligase [Source:ZFIN;Acc:ZDB-GENE-081022-128]
14. abi2a ENSDARG00000058207, ENSDARG00000111927 1465.96 10989.01 abl-interactor 2a [Source:ZFIN;Acc:ZDB-GENE-060929-192]
15. actb2 ENSDARG00000037870 1465.96 10989.01 actin, beta 2 [Source:ZFIN;Acc:ZDB-GENE-000329-3]
16. arhgap1 ENSDARG00000024324 1465.96 10989.01 Rho GTPase activating protein 1 [Source:ZFIN;Acc:ZDB-GENE-050417-305]
17. ash2l ENSDARG00000060392 1465.96 10989.01 ash2 like, histone lysine methyltransferase complex subunit [Source:ZFIN;Acc:ZDB-GENE-030131-494]
18. aurkb ENSDARG00000037640 1465.96 10989.01 aurora kinase B [Source:ZFIN;Acc:ZDB-GENE-020419-40]
19. bdh1 ENSDARG00000059388 1465.96 10989.01 3-hydroxybutyrate dehydrogenase, type 1 [Source:ZFIN;Acc:ZDB-GENE-070410-130]
20. blzf1 ENSDARG00000011299 1465.96 10989.01 basic leucine zipper nuclear factor 1 [Source:ZFIN;Acc:ZDB-GENE-010724-1]
21. ccnd1 ENSDARG00000101637 1465.96 10989.01 cyclin D1 [Source:ZFIN;Acc:ZDB-GENE-980526-176]
22. cdh2 ENSDARG00000018693, ENSDARG00000117201 1465.96 10989.01 cadherin 2, type 1, N-cadherin (neuronal) [Source:ZFIN;Acc:ZDB-GENE-990415-171]
23. cfl1 ENSDARG00000021124 1465.96 10989.01 cofilin 1 [Source:ZFIN;Acc:ZDB-GENE-030131-215]
24. commd4 ENSDARG00000061946 1465.96 10989.01 COMM domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-060929-600]
25. cops2 ENSDARG00000004785 1465.96 10989.01 COP9 signalosome subunit 2 [Source:ZFIN;Acc:ZDB-GENE-040625-15]
26. dlx3b ENSDARG00000014626 1465.96 10989.01 distal-less homeobox 3b [Source:ZFIN;Acc:ZDB-GENE-980526-280]
27. eef1a1l1 ENSDARG00000020850 1465.96 10989.01 eukaryotic translation elongation factor 1 alpha 1, like 1 [Source:ZFIN;Acc:ZDB-GENE-990415-52]
28. eif2ak3 ENSDARG00000062139 1465.96 10989.01 eukaryotic translation initiation factor 2-alpha kinase 3 [Source:ZFIN;Acc:ZDB-GENE-050414-2]
29. eif4ebp1 ENSDARG00000043608, ENSDARG00000113927 1465.96 10989.01 eukaryotic translation initiation factor 4E binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2332]
30. erh ENSDARG00000032866 1465.96 10989.01 enhancer of rudimentary homolog (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-990415-57]
31. fbn2b ENSDARG00000098237 1465.96 10989.01 fibrillin 2b [Source:ZFIN;Acc:ZDB-GENE-090112-3]
32. fetub ENSDARG00000053973 1465.96 10989.01 fetuin B [Source:ZFIN;Acc:ZDB-GENE-050208-4]
33. flna ENSDARG00000074201 1465.96 10989.01 filamin A, alpha (actin binding protein 280) [Source:ZFIN;Acc:ZDB-GENE-030131-2145]
34. fmr1 ENSDARG00000037433 1465.96 10989.01 fragile X mental retardation 1 [Source:ZFIN;Acc:ZDB-GENE-020731-6]
35. hmga2 ENSDARG00000069912 1465.96 10989.01 high mobility group AT-hook 2 [Source:ZFIN;Acc:ZDB-GENE-030131-3148]
36. ik ENSDARG00000004161 1465.96 10989.01 IK cytokine [Source:ZFIN;Acc:ZDB-GENE-030131-960]
37. kazald2 ENSDARG00000078518 1465.96 10989.01 Kazal-type serine peptidase inhibitor domain 2 [Source:ZFIN;Acc:ZDB-GENE-070928-14]
38. khdrbs1b ENSDARG00000070475 1465.96 10989.01 KH domain containing, RNA binding, signal transduction associated 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2344]
39. lamtor2 ENSDARG00000039872 1465.96 10989.01 late endosomal/lysosomal adaptor, MAPK and MTOR activator 2 [Source:ZFIN;Acc:ZDB-GENE-040801-63]
40. marcksb ENSDARG00000008803 1465.96 10989.01 myristoylated alanine-rich protein kinase C substrate b [Source:ZFIN;Acc:ZDB-GENE-030131-1921]
41. mef2d ENSDARG00000040237 1465.96 10989.01 myocyte enhancer factor 2d [Source:ZFIN;Acc:ZDB-GENE-990415-164]
42. mpz ENSDARG00000038609 1465.96 10989.01 myelin protein zero [Source:ZFIN;Acc:ZDB-GENE-010724-4]
43. mrpl12 ENSDARG00000038768 1465.96 10989.01 mitochondrial ribosomal protein L12 [Source:ZFIN;Acc:ZDB-GENE-050417-187]
44. mt-co3 ENSDARG00000063912 1465.96 10989.01 cytochrome c oxidase III, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-16]
45. mt-nd2 ENSDARG00000063899 1465.96 10989.01 NADH dehydrogenase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-8]
46. mt-nd4 ENSDARG00000063917 1465.96 10989.01 NADH dehydrogenase 4, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-10]
47. ost4 ENSDARG00000096118 1465.96 10989.01 oligosaccharyltransferase complex subunit 4 (non-catalytic) [Source:ZFIN;Acc:ZDB-GENE-110307-1]
48. pbx4 ENSDARG00000052150 1465.96 10989.01 pre-B-cell leukemia transcription factor 4 [Source:ZFIN;Acc:ZDB-GENE-000201-18]
49. pdia3 ENSDARG00000102640 1465.96 10989.01 protein disulfide isomerase family A, member 3 [Source:ZFIN;Acc:ZDB-GENE-031002-9]
50. ppiaa ENSDARG00000009212 1465.96 10989.01 peptidylprolyl isomerase Aa (cyclophilin A) [Source:ZFIN;Acc:ZDB-GENE-030131-8556]
51. ppp2cb ENSDARG00000099241, ENSDARG00000111489 1465.96 10989.01 protein phosphatase 2, catalytic subunit, beta isozyme [Source:ZFIN;Acc:ZDB-GENE-040426-2487]
52. rpl10a ENSDARG00000042905, ENSDARG00000115649 1465.96 10989.01 ribosomal protein L10a [Source:ZFIN;Acc:ZDB-GENE-030131-2025]
53. rpl21 ENSDARG00000010516, ENSDARG00000110263 1465.96 10989.01 ribosomal protein L21 [Source:ZFIN;Acc:ZDB-GENE-030131-8512]
54. rps5 ENSDARG00000043453 1465.96 10989.01 ribosomal protein S5 [Source:ZFIN;Acc:ZDB-GENE-020419-12]
55. rpsa ENSDARG00000019181 1465.96 10989.01 ribosomal protein SA [Source:ZFIN;Acc:ZDB-GENE-040426-811]
56. sf3a1 ENSDARG00000041887 1465.96 10989.01 splicing factor 3a, subunit 1 [Source:ZFIN;Acc:ZDB-GENE-030616-156]
57. si:ch211-198a12.6 ENSDARG00000074624, ENSDARG00000114808 1465.96 10989.01 si:ch211-198a12.6 [Source:ZFIN;Acc:ZDB-GENE-030131-1683]
58. si:ch73-138n13.1 ENSDARG00000075349 1465.96 10989.01 si:ch73-138n13.1 [Source:ZFIN;Acc:ZDB-GENE-091204-448]
59. si:dkey-177p2.6 ENSDARG00000042322 1465.96 10989.01 si:dkey-177p2.6 [Source:ZFIN;Acc:ZDB-GENE-030131-5926]
60. smarcal1 ENSDARG00000102265 1465.96 10989.01 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a-like 1 [Source:ZFIN;Acc:ZDB-GENE-041210-303]
61. smo ENSDARG00000002952 1465.96 10989.01 smoothened, frizzled class receptor [Source:ZFIN;Acc:ZDB-GENE-980526-89]
62. srsf3b ENSDARG00000059360 1465.96 10989.01 serine/arginine-rich splicing factor 3b [Source:ZFIN;Acc:ZDB-GENE-071005-2]
63. tfdp1b ENSDARG00000016304 1465.96 10989.01 transcription factor Dp-1, b [Source:ZFIN;Acc:ZDB-GENE-040426-1746]
64. timmdc1 ENSDARG00000053466 1465.96 10989.01 translocase of inner mitochondrial membrane domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-050417-369]
65. tnnc2 ENSDARG00000070835, ENSDARG00000111155 1465.96 10989.01 troponin C type 2 (fast) [Source:ZFIN;Acc:ZDB-GENE-000322-2]
66. toporsb ENSDARG00000105028 1465.96 10989.01 topoisomerase I binding, arginine/serine-rich b [Source:ZFIN;Acc:ZDB-GENE-110728-3]
67. ube2e1 ENSDARG00000116649 1465.96 10989.01 ubiquitin-conjugating enzyme E2E 1 [Source:ZFIN;Acc:ZDB-GENE-071004-16]
68. ywhabb ENSDARG00000075758 1465.96 10989.01 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide b [Source:ZFIN;Acc:ZDB-GENE-040426-2160]
69. zgc:123194 zgc:123194 1465.96 10989.01
70. znf865 ENSDARG00000036698 1465.96 10989.01 zinc finger protein 865 [Source:ZFIN;Acc:ZDB-GENE-060503-896]
71. 5S_rRNA 5S_rRNA 0.00 0.00
72. 5S_rRNA_1 5S_rRNA_1 0.00 0.00
73. 5S_rRNA_10 5S_rRNA_10 0.00 0.00
74. 5S_rRNA_11 5S_rRNA_11 0.00 0.00
75. 5S_rRNA_12 5S_rRNA_12 0.00 0.00
76. 5S_rRNA_13 5S_rRNA_13 0.00 0.00
77. 5S_rRNA_14 5S_rRNA_14 0.00 0.00
78. 5S_rRNA_15 5S_rRNA_15 0.00 0.00
79. 5S_rRNA_16 5S_rRNA_16 0.00 0.00
80. 5S_rRNA_17 5S_rRNA_17 0.00 0.00
81. 5S_rRNA_18 5S_rRNA_18 0.00 0.00
82. 5S_rRNA_19 5S_rRNA_19 0.00 0.00
83. 5S_rRNA_2 5S_rRNA_2 0.00 0.00
84. 5S_rRNA_20 5S_rRNA_20 0.00 0.00
85. 5S_rRNA_21 5S_rRNA_21 0.00 0.00
86. 5S_rRNA_22 5S_rRNA_22 0.00 0.00
87. 5S_rRNA_23 5S_rRNA_23 0.00 0.00
88. 5S_rRNA_24 5S_rRNA_24 0.00 0.00
89. 5S_rRNA_25 5S_rRNA_25 0.00 0.00
90. 5S_rRNA_26 5S_rRNA_26 0.00 0.00
91. 5S_rRNA_27 5S_rRNA_27 0.00 0.00
92. 5S_rRNA_28 5S_rRNA_28 0.00 0.00
93. 5S_rRNA_29 5S_rRNA_29 0.00 0.00
94. 5S_rRNA_3 5S_rRNA_3 0.00 0.00
95. 5S_rRNA_30 5S_rRNA_30 0.00 0.00
96. 5S_rRNA_31 5S_rRNA_31 0.00 0.00
97. 5S_rRNA_4 5S_rRNA_4 0.00 0.00
98. 5S_rRNA_5 5S_rRNA_5 0.00 0.00
99. 5S_rRNA_6 5S_rRNA_6 0.00 0.00
100. 5S_rRNA_7 5S_rRNA_7 0.00 0.00
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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