Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Zebrafish_28hpf_whole1, section s66.

Sample reads: 133,402. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. AC024175.4 AC024175.4 24552.59 184049.02
2. krt4 ENSDARG00000017624, ENSDARG00000115790 5728.94 42944.79 keratin 4 [Source:ZFIN;Acc:ZDB-GENE-000607-83]
3. mt-atp6 ENSDARG00000063911 2455.26 18404.91 ATP synthase 6, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-18]
4. rps4x ENSDARG00000014690 2455.26 18404.91 ribosomal protein S4 X-linked [Source:ZFIN;Acc:ZDB-GENE-040927-19]
5. si:dkey-151g10.6 si:dkey-151g10.6 2455.26 18404.91
6. srsf2a ENSDARG00000057484 2455.26 18404.91 serine/arginine-rich splicing factor 2a [Source:ZFIN;Acc:ZDB-GENE-040426-2706]
7. CPAMD8 ENSDARG00000056530 1636.84 12269.94 C3 and PZP-like, alpha-2-macroglobulin domain containing 8 [Source:ZFIN;Acc:ZDB-GENE-050208-428]
8. actb2 ENSDARG00000037870 1636.84 12269.94 actin, beta 2 [Source:ZFIN;Acc:ZDB-GENE-000329-3]
9. ddah2 ENSDARG00000105009 1636.84 12269.94 dimethylarginine dimethylaminohydrolase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-913]
10. hbbe1.1 ENSDARG00000113599 1636.84 12269.94 hemoglobin beta embryonic-1.1 [Source:ZFIN;Acc:ZDB-GENE-030616-7]
11. icn ENSDARG00000009978 1636.84 12269.94 ictacalcin [Source:ZFIN;Acc:ZDB-GENE-030131-8599]
12. id1 ENSDARG00000040764 1636.84 12269.94 inhibitor of DNA binding 1 [Source:ZFIN;Acc:ZDB-GENE-990415-96]
13. igf2bp2a ENSDARG00000003421 1636.84 12269.94 insulin-like growth factor 2 mRNA binding protein 2a [Source:ZFIN;Acc:ZDB-GENE-070912-44]
14. lsm12a ENSDARG00000028848, ENSDARG00000115800 1636.84 12269.94 LSM12 homolog a [Source:ZFIN;Acc:ZDB-GENE-040516-12]
15. mt-co2 ENSDARG00000063908 1636.84 12269.94 cytochrome c oxidase II, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-15]
16. mt-nd1 ENSDARG00000063895 1636.84 12269.94 NADH dehydrogenase 1, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-7]
17. mt-nd2 ENSDARG00000063899 1636.84 12269.94 NADH dehydrogenase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-8]
18. pbx4 ENSDARG00000052150 1636.84 12269.94 pre-B-cell leukemia transcription factor 4 [Source:ZFIN;Acc:ZDB-GENE-000201-18]
19. prkag3b ENSDARG00000000369 1636.84 12269.94 protein kinase, AMP-activated, gamma 3b non-catalytic subunit [Source:ZFIN;Acc:ZDB-GENE-060421-6938]
20. psmd11a ENSDARG00000060150 1636.84 12269.94 proteasome 26S subunit, non-ATPase 11a [Source:ZFIN;Acc:ZDB-GENE-030131-2711]
21. puf60b ENSDARG00000001241 1636.84 12269.94 poly-U binding splicing factor b [Source:ZFIN;Acc:ZDB-GENE-040625-116]
22. rpl11 ENSDARG00000043509 1636.84 12269.94 ribosomal protein L11 [Source:ZFIN;Acc:ZDB-GENE-040625-147]
23. rpl19 ENSDARG00000013307 1636.84 12269.94 ribosomal protein L19 [Source:ZFIN;Acc:ZDB-GENE-040426-2290]
24. rpl27 ENSDARG00000015128 1636.84 12269.94 ribosomal protein L27 [Source:ZFIN;Acc:ZDB-GENE-030131-4343]
25. si:dkeyp-86f7.3 si:dkeyp-86f7.3 1636.84 12269.94
26. si:rp71-45k5.4 ENSDARG00000035679 1636.84 12269.94 si:rp71-45k5.4 [Source:ZFIN;Acc:ZDB-GENE-060503-941]
27. tmsb4x ENSDARG00000077777 1636.84 12269.94 thymosin beta 4 X-linked [Source:ZFIN;Acc:ZDB-GENE-030131-8304]
28. ACTN4_1 ACTN4_1 818.42 6134.97
29. AKAP2 AKAP2 818.42 6134.97
30. AL954137.2 ENSDARG00000114408 818.42 6134.97
31. C13H10orf11 818.42 6134.97 c13h10orf11 homolog (H. sapiens), transcript variant X2
32. CT485993.2 CT485993.2 818.42 6134.97
33. CU695232.1 ENSDARG00000098286 818.42 6134.97 zinc transporter ZIP9-B-like [Source:NCBI gene;Acc:571446]
34. ITFG3 ITFG3 818.42 6134.97
35. LYRM7 ENSDARG00000079815, ENSDARG00000111617, ENSDARG00000114632 818.42 6134.97 LYR motif containing 7 [Source:ZFIN;Acc:ZDB-GENE-070615-32]
36. RBM6 ENSDARG00000077060 818.42 6134.97 RNA binding motif protein 6 [Source:ZFIN;Acc:ZDB-GENE-050309-79]
37. abracl ENSDARG00000042876 818.42 6134.97 ABRA C-terminal like [Source:ZFIN;Acc:ZDB-GENE-030131-8594]
38. bc2 818.42 6134.97 putative breast adenocarcinoma marker
39. btbd2 btbd2 818.42 6134.97
40. calr ENSDARG00000076290 818.42 6134.97 calreticulin [Source:ZFIN;Acc:ZDB-GENE-030131-4042]
41. ccdc25 ENSDARG00000021753 818.42 6134.97 coiled-coil domain containing 25 [Source:ZFIN;Acc:ZDB-GENE-040426-1389]
42. ccnd1 ENSDARG00000101637 818.42 6134.97 cyclin D1 [Source:ZFIN;Acc:ZDB-GENE-980526-176]
43. cd81 cd81 818.42 6134.97
44. cdca7a ENSDARG00000077620 818.42 6134.97 cell division cycle associated 7a [Source:ZFIN;Acc:ZDB-GENE-050417-29]
45. col1a1a ENSDARG00000012405, ENSDARG00000116113 818.42 6134.97 collagen, type I, alpha 1a [Source:ZFIN;Acc:ZDB-GENE-030131-9102]
46. cope ENSDARG00000018562 818.42 6134.97 coatomer protein complex, subunit epsilon [Source:ZFIN;Acc:ZDB-GENE-041114-59]
47. dusp11 ENSDARG00000038156 818.42 6134.97 dual specificity phosphatase 11 (RNA/RNP complex 1-interacting) [Source:ZFIN;Acc:ZDB-GENE-050417-226]
48. eef1a1l1 ENSDARG00000020850 818.42 6134.97 eukaryotic translation elongation factor 1 alpha 1, like 1 [Source:ZFIN;Acc:ZDB-GENE-990415-52]
49. eif3f ENSDARG00000077533 818.42 6134.97 eukaryotic translation initiation factor 3, subunit F [Source:ZFIN;Acc:ZDB-GENE-100215-2]
50. eif4bb ENSDARG00000010194, ENSDARG00000112432 818.42 6134.97 eukaryotic translation initiation factor 4Bb [Source:ZFIN;Acc:ZDB-GENE-030131-8563]
51. eif5a ENSDARG00000017235 818.42 6134.97 eukaryotic translation initiation factor 5A [Source:ZFIN;Acc:ZDB-GENE-040426-2229]
52. ercc4 ENSDARG00000014161 818.42 6134.97 excision repair cross-complementation group 4 [Source:ZFIN;Acc:ZDB-GENE-030131-5533]
53. flna ENSDARG00000074201 818.42 6134.97 filamin A, alpha (actin binding protein 280) [Source:ZFIN;Acc:ZDB-GENE-030131-2145]
54. fubp1 ENSDARG00000029248 818.42 6134.97 far upstream element (FUSE) binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2159]
55. gnb2l1 818.42 6134.97 guanine nucleotide binding protein (G protein), beta polypeptide 2-like 1
56. hars ENSDARG00000003693 818.42 6134.97 histidyl-tRNA synthetase [Source:ZFIN;Acc:ZDB-GENE-040912-152]
57. hat1 ENSDARG00000034916 818.42 6134.97 histone acetyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-040912-99]
58. hbae3 ENSDARG00000079305 818.42 6134.97 hemoglobin alpha embryonic-3 [Source:ZFIN;Acc:ZDB-GENE-990706-3]
59. hmga1a ENSDARG00000028335 818.42 6134.97 high mobility group AT-hook 1a [Source:ZFIN;Acc:ZDB-GENE-010502-1]
60. hmgn2 ENSDARG00000099572 818.42 6134.97 high mobility group nucleosomal binding domain 2 [Source:ZFIN;Acc:ZDB-GENE-051030-81]
61. hnrnpab hnrnpab 818.42 6134.97
62. hsp90b1 ENSDARG00000003570, ENSDARG00000114206 818.42 6134.97 heat shock protein 90, beta (grp94), member 1 [Source:ZFIN;Acc:ZDB-GENE-031002-1]
63. marcksl1a ENSDARG00000039034 818.42 6134.97 MARCKS-like 1a [Source:ZFIN;Acc:ZDB-GENE-040426-2146]
64. mknk2b ENSDARG00000015164 818.42 6134.97 MAP kinase interacting serine/threonine kinase 2b [Source:ZFIN;Acc:ZDB-GENE-030829-2]
65. mt-nd4 ENSDARG00000063917 818.42 6134.97 NADH dehydrogenase 4, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-10]
66. mtor ENSDARG00000053196 818.42 6134.97 mechanistic target of rapamycin kinase [Source:ZFIN;Acc:ZDB-GENE-030131-2974]
67. nop58 ENSDARG00000104353 818.42 6134.97 NOP58 ribonucleoprotein homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-040426-2140]
68. ogdha ENSDARG00000034270 818.42 6134.97 oxoglutarate (alpha-ketoglutarate) dehydrogenase a (lipoamide) [Source:ZFIN;Acc:ZDB-GENE-030131-2143]
69. prps1b ENSDARG00000037506, ENSDARG00000110507 818.42 6134.97 phosphoribosyl pyrophosphate synthetase 1B [Source:ZFIN;Acc:ZDB-GENE-030131-4011]
70. psmc2 ENSDARG00000020101 818.42 6134.97 proteasome 26S subunit, ATPase 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1327]
71. pygma ENSDARG00000055518 818.42 6134.97 phosphorylase, glycogen, muscle A [Source:ZFIN;Acc:ZDB-GENE-050522-482]
72. rpl14 ENSDARG00000103433 818.42 6134.97 ribosomal protein L14 [Source:ZFIN;Acc:ZDB-GENE-030131-2085]
73. rpl15 ENSDARG00000009285 818.42 6134.97 ribosomal protein L15 [Source:ZFIN;Acc:ZDB-GENE-040801-183]
74. rpl18 ENSDARG00000029533 818.42 6134.97 ribosomal protein L18 [Source:ZFIN;Acc:ZDB-GENE-040801-165]
75. rpl36a ENSDARG00000058105, ENSDARG00000112656 818.42 6134.97 ribosomal protein L36A [Source:ZFIN;Acc:ZDB-GENE-020423-1]
76. rplp0 ENSDARG00000051783 818.42 6134.97 ribosomal protein, large, P0 [Source:ZFIN;Acc:ZDB-GENE-000629-1]
77. rps26l ENSDARG00000030408 818.42 6134.97 ribosomal protein S26, like [Source:ZFIN;Acc:ZDB-GENE-040426-1706]
78. rps3a ENSDARG00000035692, ENSDARG00000114628, ENSDARG00000115378 818.42 6134.97 ribosomal protein S3A [Source:ZFIN;Acc:ZDB-GENE-030131-9184]
79. rps9 ENSDARG00000011405, ENSDARG00000113248 818.42 6134.97 ribosomal protein S9 [Source:ZFIN;Acc:ZDB-GENE-010724-15]
80. s100v2 ENSDARG00000070702 818.42 6134.97 S100 calcium binding protein V2 [Source:ZFIN;Acc:ZDB-GENE-030131-8909]
81. scamp2 ENSDARG00000010279 818.42 6134.97 secretory carrier membrane protein 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2702]
82. sdad1 ENSDARG00000105117 818.42 6134.97 SDA1 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-021213-1]
83. selt2 818.42 6134.97 selenoprotein T, 2
84. si:ch211-152p11.4 ENSDARG00000079705 818.42 6134.97 si:ch211-152p11.4 [Source:ZFIN;Acc:ZDB-GENE-060503-764]
85. si:dkey-150i13.2 ENSDARG00000071052 818.42 6134.97 si:dkey-150i13.2 [Source:ZFIN;Acc:ZDB-GENE-090312-157]
86. si:dkeyp-113d7.4 si:dkeyp-113d7.4 818.42 6134.97
87. slc1a3a ENSDARG00000104431 818.42 6134.97 solute carrier family 1 (glial high affinity glutamate transporter), member 3a [Source:ZFIN;Acc:ZDB-GENE-030131-2159]
88. smyd1b ENSDARG00000091253 818.42 6134.97 SET and MYND domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-060522-1]
89. snrpa1 ENSDARG00000024651 818.42 6134.97 small nuclear ribonucleoprotein polypeptide A' [Source:ZFIN;Acc:ZDB-GENE-041114-82]
90. snrpf ENSDARG00000105037 818.42 6134.97 small nuclear ribonucleoprotein polypeptide F [Source:ZFIN;Acc:ZDB-GENE-040930-9]
91. tbcela ENSDARG00000002682 818.42 6134.97 tubulin folding cofactor E-like a [Source:ZFIN;Acc:ZDB-GENE-040426-1719]
92. thy1 ENSDARG00000035018, ENSDARG00000112392, ENSDARG00000112677 818.42 6134.97 Thy-1 cell surface antigen [Source:ZFIN;Acc:ZDB-GENE-030131-8561]
93. tnnc2 ENSDARG00000070835, ENSDARG00000111155 818.42 6134.97 troponin C type 2 (fast) [Source:ZFIN;Acc:ZDB-GENE-000322-2]
94. tnnt2c ENSDARG00000032242 818.42 6134.97 troponin T2c, cardiac [Source:ZFIN;Acc:ZDB-GENE-030520-1]
95. tpm3 ENSDARG00000005162 818.42 6134.97 tropomyosin 3 [Source:ZFIN;Acc:ZDB-GENE-030826-16]
96. tuba8l4 ENSDARG00000006260 818.42 6134.97 tubulin, alpha 8 like 4 [Source:ZFIN;Acc:ZDB-GENE-040426-860]
97. vapal ENSDARG00000115862 818.42 6134.97 VAMP (vesicle-associated membrane protein)-associated protein A, like [Source:ZFIN;Acc:ZDB-GENE-040718-281]
98. wu:fb17f05 wu:fb17f05 818.42 6134.97
99. yipf4 ENSDARG00000030957, ENSDARG00000109994 818.42 6134.97 Yip1 domain family, member 4 [Source:ZFIN;Acc:ZDB-GENE-040426-2253]
100. 5S_rRNA 5S_rRNA 0.00 0.00
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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