Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Experiment Zebrafish_28hpf_whole1, section s48.

Sample reads: 133,412. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. AC024175.4 AC024175.4 25570.03 191665.39
2. krt4 ENSDARG00000017624, ENSDARG00000115790 3211.90 24075.45 keratin 4 [Source:ZFIN;Acc:ZDB-GENE-000607-83]
3. tmsb4x ENSDARG00000077777 1943.03 14564.38 thymosin beta 4 X-linked [Source:ZFIN;Acc:ZDB-GENE-030131-8304]
4. mt-nd2 ENSDARG00000063899 1266.46 9493.01 NADH dehydrogenase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-8]
5. mt-co2 ENSDARG00000063908 1199.05 8987.72 cytochrome c oxidase II, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-15]
6. mt-atp6 ENSDARG00000063911 1191.82 8933.53 ATP synthase 6, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-18]
7. mt-nd4 ENSDARG00000063917 1131.63 8482.36 NADH dehydrogenase 4, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-10]
8. tpma ENSDARG00000033683 1124.41 8428.25 alpha-tropomyosin [Source:ZFIN;Acc:ZDB-GENE-990415-269]
9. zgc:112425 zgc:112425 849.93 6370.82
10. si:dkey-151g10.6 si:dkey-151g10.6 825.85 6190.33
11. actb2 ENSDARG00000037870 758.43 5684.97 actin, beta 2 [Source:ZFIN;Acc:ZDB-GENE-000329-3]
12. mt-nd1 ENSDARG00000063895 674.16 5053.30 NADH dehydrogenase 1, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-7]
13. eef2b ENSDARG00000100371, ENSDARG00000109247 671.76 5035.31 eukaryotic translation elongation factor 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5128]
14. eef1a1l1 ENSDARG00000020850 666.94 4999.19 eukaryotic translation elongation factor 1 alpha 1, like 1 [Source:ZFIN;Acc:ZDB-GENE-990415-52]
15. ppiaa ENSDARG00000009212 666.94 4999.19 peptidylprolyl isomerase Aa (cyclophilin A) [Source:ZFIN;Acc:ZDB-GENE-030131-8556]
16. hmga1a ENSDARG00000028335 594.71 4457.77 high mobility group AT-hook 1a [Source:ZFIN;Acc:ZDB-GENE-010502-1]
17. mt-co3 ENSDARG00000063912 561.00 4205.09 cytochrome c oxidase III, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-16]
18. rpl10a ENSDARG00000042905, ENSDARG00000115649 495.99 3717.79 ribosomal protein L10a [Source:ZFIN;Acc:ZDB-GENE-030131-2025]
19. rps26l ENSDARG00000030408 495.99 3717.79 ribosomal protein S26, like [Source:ZFIN;Acc:ZDB-GENE-040426-1706]
20. actc1b ENSDARG00000099197 493.58 3699.73 actin, alpha, cardiac muscle 1b [Source:ZFIN;Acc:ZDB-GENE-000322-1]
21. acta1a ENSDARG00000036371 462.28 3465.11 actin, alpha 1a, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-050417-267]
22. mt-cyb ENSDARG00000063924 459.88 3447.12 cytochrome b, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-17]
23. ckmb ENSDARG00000040565 450.24 3374.87 creatine kinase, muscle b [Source:ZFIN;Acc:ZDB-GENE-040426-2128]
24. rpl18a ENSDARG00000025073 435.80 3266.63 ribosomal protein L18a [Source:ZFIN;Acc:ZDB-GENE-040426-1071]
25. rpl36 ENSDARG00000100588 428.57 3212.43 ribosomal protein L36 [Source:ZFIN;Acc:ZDB-GENE-040622-2]
26. actb1 ENSDARG00000037746, ENSDARG00000113649 411.72 3086.13 actin, beta 1 [Source:ZFIN;Acc:ZDB-GENE-000329-1]
27. rpl23 ENSDARG00000053457 392.46 2941.76 ribosomal protein L23 [Source:ZFIN;Acc:ZDB-GENE-030131-8756]
28. hsp90aa1.1 ENSDARG00000010478 375.61 2815.46 heat shock protein 90, alpha (cytosolic), class A member 1, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-990415-94]
29. rpl21 ENSDARG00000010516, ENSDARG00000110263 375.61 2815.46 ribosomal protein L21 [Source:ZFIN;Acc:ZDB-GENE-030131-8512]
30. hspa8 ENSDARG00000068992, ENSDARG00000114726 368.38 2761.27 heat shock protein 8 [Source:ZFIN;Acc:ZDB-GENE-990415-92]
31. zgc:92533 zgc:92533 356.34 2671.02
32. rps14 ENSDARG00000036629 353.94 2653.03 ribosomal protein S14 [Source:ZFIN;Acc:ZDB-GENE-030131-8631]
33. btf3 ENSDARG00000035400, ENSDARG00000116462 346.71 2598.84 basic transcription factor 3 [Source:ZFIN;Acc:ZDB-GENE-030131-8731]
34. myl10 ENSDARG00000062592 341.90 2562.78 myosin, light chain 10, regulatory [Source:ZFIN;Acc:ZDB-GENE-050417-421]
35. rps23 ENSDARG00000021838 339.49 2544.72 ribosomal protein S23 [Source:ZFIN;Acc:ZDB-GENE-080220-50]
36. mylz3 ENSDARG00000017441 334.67 2508.59 myosin, light polypeptide 3, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-000322-6]
37. rps27a ENSDARG00000032725, ENSDARG00000114059 332.27 2490.60 ribosomal protein S27a [Source:ZFIN;Acc:ZDB-GENE-030131-10018]
38. atp2a1 ENSDARG00000020574 322.64 2418.41 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 1 [Source:ZFIN;Acc:ZDB-GENE-020905-1]
39. rpl26 ENSDARG00000102317 322.64 2418.41 ribosomal protein L26 [Source:ZFIN;Acc:ZDB-GENE-040426-2117]
40. rpl8 ENSDARG00000014867 322.64 2418.41 ribosomal protein L8 [Source:ZFIN;Acc:ZDB-GENE-040426-1670]
41. tnnc2 ENSDARG00000070835, ENSDARG00000111155 317.82 2382.28 troponin C type 2 (fast) [Source:ZFIN;Acc:ZDB-GENE-000322-2]
42. rps15 ENSDARG00000070849, ENSDARG00000110979 310.60 2328.17 ribosomal protein S15 [Source:ZFIN;Acc:ZDB-GENE-030131-9092]
43. hbbe3 ENSDARG00000038147, ENSDARG00000109344 308.19 2310.10 hemoglobin beta embryonic-3 [Source:ZFIN;Acc:ZDB-GENE-980526-287]
44. mylpfa ENSDARG00000053254, ENSDARG00000112448, ENSDARG00000113256 303.37 2273.97 myosin light chain, phosphorylatable, fast skeletal muscle a [Source:ZFIN;Acc:ZDB-GENE-990712-15]
45. ttna ttna 303.37 2273.97
46. rpl9 ENSDARG00000037350, ENSDARG00000112384 293.74 2201.79 ribosomal protein L9 [Source:ZFIN;Acc:ZDB-GENE-030131-8646]
47. rpl36a ENSDARG00000058105, ENSDARG00000112656 291.33 2183.72 ribosomal protein L36A [Source:ZFIN;Acc:ZDB-GENE-020423-1]
48. rps20 ENSDARG00000036044 284.11 2129.60 ribosomal protein S20 [Source:ZFIN;Acc:ZDB-GENE-040426-2284]
49. si:dkey-150i13.2 ENSDARG00000071052 274.48 2057.42 si:dkey-150i13.2 [Source:ZFIN;Acc:ZDB-GENE-090312-157]
50. ckma ENSDARG00000035327, ENSDARG00000114671 272.07 2039.36 creatine kinase, muscle a [Source:ZFIN;Acc:ZDB-GENE-980526-109]
51. rpl19 ENSDARG00000013307 272.07 2039.36 ribosomal protein L19 [Source:ZFIN;Acc:ZDB-GENE-040426-2290]
52. hbae3 ENSDARG00000079305 269.67 2021.37 hemoglobin alpha embryonic-3 [Source:ZFIN;Acc:ZDB-GENE-990706-3]
53. rpl6 ENSDARG00000058451 264.85 1985.24 ribosomal protein L6 [Source:ZFIN;Acc:ZDB-GENE-030131-8671]
54. smyhc1 ENSDARG00000099959, ENSDARG00000115916 262.44 1967.17 slow myosin heavy chain 1 [Source:ZFIN;Acc:ZDB-GENE-030131-271]
55. cyt1l ENSDARG00000036832 255.22 1913.05 type I cytokeratin, enveloping layer, like [Source:ZFIN;Acc:ZDB-GENE-061026-4]
56. rps27.1 ENSDARG00000023298 255.22 1913.05 ribosomal protein S27, isoform 1 [Source:ZFIN;Acc:ZDB-GENE-050522-549]
57. rpl11 ENSDARG00000043509 252.81 1894.99 ribosomal protein L11 [Source:ZFIN;Acc:ZDB-GENE-040625-147]
58. rps6 ENSDARG00000019778 250.40 1876.92 ribosomal protein S6 [Source:ZFIN;Acc:ZDB-GENE-040801-8]
59. rplp1 ENSDARG00000021864 248.00 1858.93 ribosomal protein, large, P1 [Source:ZFIN;Acc:ZDB-GENE-030131-8663]
60. ptmab ENSDARG00000101766 245.59 1840.87 prothymosin alpha b [Source:ZFIN;Acc:ZDB-GENE-030131-8681]
61. zgc:66286 zgc:66286 245.59 1840.87
62. efemp2a ENSDARG00000094324 243.18 1822.81 EGF containing fibulin extracellular matrix protein 2a [Source:ZFIN;Acc:ZDB-GENE-041212-8]
63. rpl35 ENSDARG00000018334 243.18 1822.81 ribosomal protein L35 [Source:ZFIN;Acc:ZDB-GENE-020419-2]
64. ttnb ttnb 243.18 1822.81
65. AL954137.2 ENSDARG00000114408 240.77 1804.74
66. fabp3 ENSDARG00000023290 238.36 1786.68 fatty acid binding protein 3, muscle and heart [Source:ZFIN;Acc:ZDB-GENE-020318-2]
67. RPL29 ENSDARG00000077717 233.55 1750.62 ribosomal protein L29 [Source:ZFIN;Acc:ZDB-GENE-040801-167]
68. rps15a ENSDARG00000010160 231.14 1732.56 ribosomal protein S15a [Source:ZFIN;Acc:ZDB-GENE-030131-8708]
69. eif5a ENSDARG00000017235 223.92 1678.44 eukaryotic translation initiation factor 5A [Source:ZFIN;Acc:ZDB-GENE-040426-2229]
70. rps5 ENSDARG00000043453 223.92 1678.44 ribosomal protein S5 [Source:ZFIN;Acc:ZDB-GENE-020419-12]
71. rps2 ENSDARG00000077291 221.51 1660.37 ribosomal protein S2 [Source:ZFIN;Acc:ZDB-GENE-040426-2454]
72. hnrnpa0l ENSDARG00000036161, ENSDARG00000076380, ENSDARG00000114889 219.10 1642.31 heterogeneous nuclear ribonucleoprotein A0, like [Source:ZFIN;Acc:ZDB-GENE-030131-618]
73. rplp2l ENSDARG00000011201 209.47 1570.13 ribosomal protein, large P2, like [Source:ZFIN;Acc:ZDB-GENE-070327-2]
74. cirbp cirbp 207.06 1552.06
75. rps19 ENSDARG00000030602 207.06 1552.06 ribosomal protein S19 [Source:ZFIN;Acc:ZDB-GENE-040426-1716]
76. myhz2 ENSDARG00000012944 204.66 1534.07 myosin, heavy polypeptide 2, fast muscle specific [Source:ZFIN;Acc:ZDB-GENE-020604-1]
77. pabpc1a ENSDARG00000017219 204.66 1534.07 poly(A) binding protein, cytoplasmic 1a [Source:ZFIN;Acc:ZDB-GENE-030131-3238]
78. rpl5b ENSDARG00000015862, ENSDARG00000109661 204.66 1534.07 ribosomal protein L5b [Source:ZFIN;Acc:ZDB-GENE-040625-93]
79. rps10 ENSDARG00000034897 202.25 1516.01 ribosomal protein S10 [Source:ZFIN;Acc:ZDB-GENE-040426-1481]
80. rpl35a ENSDARG00000088030 197.43 1479.88 ribosomal protein L35a [Source:ZFIN;Acc:ZDB-GENE-040718-190]
81. si:dkeyp-86f7.3 si:dkeyp-86f7.3 197.43 1479.88
82. col1a1a ENSDARG00000012405, ENSDARG00000116113 192.62 1443.82 collagen, type I, alpha 1a [Source:ZFIN;Acc:ZDB-GENE-030131-9102]
83. rpl14 ENSDARG00000103433 192.62 1443.82 ribosomal protein L14 [Source:ZFIN;Acc:ZDB-GENE-030131-2085]
84. rpl39 ENSDARG00000036316, ENSDARG00000117167 192.62 1443.82 ribosomal protein L39 [Source:ZFIN;Acc:ZDB-GENE-040625-51]
85. id1 ENSDARG00000040764 187.80 1407.69 inhibitor of DNA binding 1 [Source:ZFIN;Acc:ZDB-GENE-990415-96]
86. krt8 ENSDARG00000058358, ENSDARG00000109279 187.80 1407.69 keratin 8 [Source:ZFIN;Acc:ZDB-GENE-030411-5]
87. rpl27 ENSDARG00000015128 187.80 1407.69 ribosomal protein L27 [Source:ZFIN;Acc:ZDB-GENE-030131-4343]
88. rps4x ENSDARG00000014690 187.80 1407.69 ribosomal protein S4 X-linked [Source:ZFIN;Acc:ZDB-GENE-040927-19]
89. cfl1 ENSDARG00000021124 182.99 1371.64 cofilin 1 [Source:ZFIN;Acc:ZDB-GENE-030131-215]
90. rps9 ENSDARG00000011405, ENSDARG00000113248 182.99 1371.64 ribosomal protein S9 [Source:ZFIN;Acc:ZDB-GENE-010724-15]
91. aldoab ENSDARG00000034470 180.58 1353.57 aldolase a, fructose-bisphosphate, b [Source:ZFIN;Acc:ZDB-GENE-040426-2299]
92. rps12 ENSDARG00000036875, ENSDARG00000115157 180.58 1353.57 ribosomal protein S12 [Source:ZFIN;Acc:ZDB-GENE-030131-8951]
93. rps13 ENSDARG00000036298, ENSDARG00000112818 180.58 1353.57 ribosomal protein S13 [Source:ZFIN;Acc:ZDB-GENE-040625-52]
94. rpsa ENSDARG00000019181 180.58 1353.57 ribosomal protein SA [Source:ZFIN;Acc:ZDB-GENE-040426-811]
95. zgc:113413 zgc:113413 180.58 1353.57
96. mt-co1 ENSDARG00000063905 178.17 1335.51 cytochrome c oxidase I, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-14]
97. COX5B_1 ENSDARG00000015978 175.76 1317.45 cytochrome c oxidase subunit 5B [Source:HGNC Symbol;Acc:HGNC:2269]
98. acta1b ENSDARG00000055618 175.76 1317.45 actin, alpha 1b, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-030131-55]
99. rpl7 ENSDARG00000007320 175.76 1317.45 ribosomal protein L7 [Source:ZFIN;Acc:ZDB-GENE-030131-8654]
100. myhz1.3 ENSDARG00000067997 173.36 1299.46 myosin, heavy polypeptide 1.3, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-070705-74]
First Previous 1 2 3 Next Last
Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA