Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Zebrafish_28hpf_whole1, section s45.

Sample reads: 133,413. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. AC024175.4 AC024175.4 19006.66 142465.96
2. krt4 ENSDARG00000017624, ENSDARG00000115790 2565.61 19230.74 keratin 4 [Source:ZFIN;Acc:ZDB-GENE-000607-83]
3. mt-co2 ENSDARG00000063908 1748.42 13105.42 cytochrome c oxidase II, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-15]
4. tmsb4x ENSDARG00000077777 1745.29 13081.96 thymosin beta 4 X-linked [Source:ZFIN;Acc:ZDB-GENE-030131-8304]
5. mt-nd2 ENSDARG00000063899 1672.04 12532.91 NADH dehydrogenase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-8]
6. mt-nd4 ENSDARG00000063917 1588.34 11905.53 NADH dehydrogenase 4, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-10]
7. tpma ENSDARG00000033683 1488.93 11160.40 alpha-tropomyosin [Source:ZFIN;Acc:ZDB-GENE-990415-269]
8. mt-atp6 ENSDARG00000063911 1369.65 10266.32 ATP synthase 6, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-18]
9. ckmb ENSDARG00000040565 1036.92 7772.32 creatine kinase, muscle b [Source:ZFIN;Acc:ZDB-GENE-040426-2128]
10. si:dkey-151g10.6 si:dkey-151g10.6 905.08 6784.10
11. mt-co3 ENSDARG00000063912 764.87 5733.15 cytochrome c oxidase III, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-16]
12. mt-nd1 ENSDARG00000063895 757.55 5678.28 NADH dehydrogenase 1, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-7]
13. zgc:112425 zgc:112425 693.72 5199.83
14. ppiaa ENSDARG00000009212 691.63 5184.17 peptidylprolyl isomerase Aa (cyclophilin A) [Source:ZFIN;Acc:ZDB-GENE-030131-8556]
15. eef1a1l1 ENSDARG00000020850 682.21 5113.56 eukaryotic translation elongation factor 1 alpha 1, like 1 [Source:ZFIN;Acc:ZDB-GENE-990415-52]
16. actb2 ENSDARG00000037870 647.68 4854.74 actin, beta 2 [Source:ZFIN;Acc:ZDB-GENE-000329-3]
17. hbbe3 ENSDARG00000038147, ENSDARG00000109344 620.48 4650.86 hemoglobin beta embryonic-3 [Source:ZFIN;Acc:ZDB-GENE-980526-287]
18. rpl23 ENSDARG00000053457 597.46 4478.31 ribosomal protein L23 [Source:ZFIN;Acc:ZDB-GENE-030131-8756]
19. mt-cyb ENSDARG00000063924 584.90 4384.17 cytochrome b, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-17]
20. hbae3 ENSDARG00000079305 529.45 3968.54 hemoglobin alpha embryonic-3 [Source:ZFIN;Acc:ZDB-GENE-990706-3]
21. rpl10a ENSDARG00000042905, ENSDARG00000115649 525.26 3937.13 ribosomal protein L10a [Source:ZFIN;Acc:ZDB-GENE-030131-2025]
22. rps26l ENSDARG00000030408 523.17 3921.46 ribosomal protein S26, like [Source:ZFIN;Acc:ZDB-GENE-040426-1706]
23. actc1b ENSDARG00000099197 505.38 3788.12 actin, alpha, cardiac muscle 1b [Source:ZFIN;Acc:ZDB-GENE-000322-1]
24. hmga1a ENSDARG00000028335 448.88 3364.62 high mobility group AT-hook 1a [Source:ZFIN;Acc:ZDB-GENE-010502-1]
25. eef2b ENSDARG00000100371, ENSDARG00000109247 447.83 3356.75 eukaryotic translation elongation factor 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5128]
26. rps23 ENSDARG00000021838 435.28 3262.68 ribosomal protein S23 [Source:ZFIN;Acc:ZDB-GENE-080220-50]
27. tnnc2 ENSDARG00000070835, ENSDARG00000111155 426.90 3199.86 troponin C type 2 (fast) [Source:ZFIN;Acc:ZDB-GENE-000322-2]
28. rpl21 ENSDARG00000010516, ENSDARG00000110263 419.58 3145.00 ribosomal protein L21 [Source:ZFIN;Acc:ZDB-GENE-030131-8512]
29. atp2a1 ENSDARG00000020574 402.84 3019.52 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 1 [Source:ZFIN;Acc:ZDB-GENE-020905-1]
30. ckma ENSDARG00000035327, ENSDARG00000114671 397.61 2980.32 creatine kinase, muscle a [Source:ZFIN;Acc:ZDB-GENE-980526-109]
31. hsp90aa1.1 ENSDARG00000010478 388.19 2909.71 heat shock protein 90, alpha (cytosolic), class A member 1, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-990415-94]
32. hspa8 ENSDARG00000068992, ENSDARG00000114726 388.19 2909.71 heat shock protein 8 [Source:ZFIN;Acc:ZDB-GENE-990415-92]
33. myl10 ENSDARG00000062592 386.10 2894.04 myosin, light chain 10, regulatory [Source:ZFIN;Acc:ZDB-GENE-050417-421]
34. mylpfa ENSDARG00000053254, ENSDARG00000112448, ENSDARG00000113256 366.22 2745.03 myosin light chain, phosphorylatable, fast skeletal muscle a [Source:ZFIN;Acc:ZDB-GENE-990712-15]
35. acta1a ENSDARG00000036371 355.75 2666.55 actin, alpha 1a, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-050417-267]
36. actb1 ENSDARG00000037746, ENSDARG00000113649 354.71 2658.76 actin, beta 1 [Source:ZFIN;Acc:ZDB-GENE-000329-1]
37. btf3 ENSDARG00000035400, ENSDARG00000116462 352.61 2643.02 basic transcription factor 3 [Source:ZFIN;Acc:ZDB-GENE-030131-8731]
38. rps14 ENSDARG00000036629 346.34 2596.02 ribosomal protein S14 [Source:ZFIN;Acc:ZDB-GENE-030131-8631]
39. rps20 ENSDARG00000036044 346.34 2596.02 ribosomal protein S20 [Source:ZFIN;Acc:ZDB-GENE-040426-2284]
40. mylz3 ENSDARG00000017441 335.87 2517.54 myosin, light polypeptide 3, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-000322-6]
41. rpl18a ENSDARG00000025073 334.83 2509.75 ribosomal protein L18a [Source:ZFIN;Acc:ZDB-GENE-040426-1071]
42. rpl8 ENSDARG00000014867 331.69 2486.21 ribosomal protein L8 [Source:ZFIN;Acc:ZDB-GENE-040426-1670]
43. zgc:66286 zgc:66286 319.13 2392.06
44. hbbe1.1 ENSDARG00000113599 313.90 2352.86 hemoglobin beta embryonic-1.1 [Source:ZFIN;Acc:ZDB-GENE-030616-7]
45. rpl36 ENSDARG00000100588 313.90 2352.86 ribosomal protein L36 [Source:ZFIN;Acc:ZDB-GENE-040622-2]
46. rps15 ENSDARG00000070849, ENSDARG00000110979 305.53 2290.12 ribosomal protein S15 [Source:ZFIN;Acc:ZDB-GENE-030131-9092]
47. rps27a ENSDARG00000032725, ENSDARG00000114059 305.53 2290.12 ribosomal protein S27a [Source:ZFIN;Acc:ZDB-GENE-030131-10018]
48. rpl36a ENSDARG00000058105, ENSDARG00000112656 297.16 2227.39 ribosomal protein L36A [Source:ZFIN;Acc:ZDB-GENE-020423-1]
49. hbae1_1 296.11 2219.52 hemoglobin, alpha embryonic 1
50. RPL29 ENSDARG00000077717 288.79 2164.65 ribosomal protein L29 [Source:ZFIN;Acc:ZDB-GENE-040801-167]
51. rpl9 ENSDARG00000037350, ENSDARG00000112384 288.79 2164.65 ribosomal protein L9 [Source:ZFIN;Acc:ZDB-GENE-030131-8646]
52. rpl26 ENSDARG00000102317 286.70 2148.98 ribosomal protein L26 [Source:ZFIN;Acc:ZDB-GENE-040426-2117]
53. rpl19 ENSDARG00000013307 283.56 2125.45 ribosomal protein L19 [Source:ZFIN;Acc:ZDB-GENE-040426-2290]
54. rps15a ENSDARG00000010160 277.28 2078.37 ribosomal protein S15a [Source:ZFIN;Acc:ZDB-GENE-030131-8708]
55. rpl39 ENSDARG00000036316, ENSDARG00000117167 265.77 1992.10 ribosomal protein L39 [Source:ZFIN;Acc:ZDB-GENE-040625-51]
56. eif5a ENSDARG00000017235 262.63 1968.56 eukaryotic translation initiation factor 5A [Source:ZFIN;Acc:ZDB-GENE-040426-2229]
57. rpl11 ENSDARG00000043509 260.54 1952.90 ribosomal protein L11 [Source:ZFIN;Acc:ZDB-GENE-040625-147]
58. rplp1 ENSDARG00000021864 258.44 1937.16 ribosomal protein, large, P1 [Source:ZFIN;Acc:ZDB-GENE-030131-8663]
59. rps27.1 ENSDARG00000023298 258.44 1937.16 ribosomal protein S27, isoform 1 [Source:ZFIN;Acc:ZDB-GENE-050522-549]
60. rps12 ENSDARG00000036875, ENSDARG00000115157 257.40 1929.36 ribosomal protein S12 [Source:ZFIN;Acc:ZDB-GENE-030131-8951]
61. si:dkeyp-86f7.3 si:dkeyp-86f7.3 256.35 1921.49
62. id1 ENSDARG00000040764 253.21 1897.96 inhibitor of DNA binding 1 [Source:ZFIN;Acc:ZDB-GENE-990415-96]
63. atp5g3b 252.17 1890.16 ATP synthase, H+ transporting, mitochondrial F0 complex, subunit c3 (subunit 9) b, transcript variant X1
64. rpl27 ENSDARG00000015128 251.12 1882.29 ribosomal protein L27 [Source:ZFIN;Acc:ZDB-GENE-030131-4343]
65. rpl35 ENSDARG00000018334 244.84 1835.22 ribosomal protein L35 [Source:ZFIN;Acc:ZDB-GENE-020419-2]
66. ttna ttna 244.84 1835.22
67. rpl18 ENSDARG00000029533 242.75 1819.55 ribosomal protein L18 [Source:ZFIN;Acc:ZDB-GENE-040801-165]
68. rps5 ENSDARG00000043453 239.61 1796.02 ribosomal protein S5 [Source:ZFIN;Acc:ZDB-GENE-020419-12]
69. faua ENSDARG00000099022 237.52 1780.35 Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed a [Source:ZFIN;Acc:ZDB-GENE-040426-1700]
70. cyt1l ENSDARG00000036832 236.47 1772.48 type I cytokeratin, enveloping layer, like [Source:ZFIN;Acc:ZDB-GENE-061026-4]
71. fabp3 ENSDARG00000023290 233.33 1748.94 fatty acid binding protein 3, muscle and heart [Source:ZFIN;Acc:ZDB-GENE-020318-2]
72. myl1 ENSDARG00000014196 233.33 1748.94 myosin, light chain 1, alkali; skeletal, fast [Source:ZFIN;Acc:ZDB-GENE-030131-8109]
73. rps2 ENSDARG00000077291 232.29 1741.15 ribosomal protein S2 [Source:ZFIN;Acc:ZDB-GENE-040426-2454]
74. lama2 ENSDARG00000099390 224.96 1686.21 laminin, alpha 2 [Source:ZFIN;Acc:ZDB-GENE-060119-1]
75. RPL37A RPL37A 223.92 1678.41
76. rps19 ENSDARG00000030602 223.92 1678.41 ribosomal protein S19 [Source:ZFIN;Acc:ZDB-GENE-040426-1716]
77. tpm3 ENSDARG00000005162 222.87 1670.54 tropomyosin 3 [Source:ZFIN;Acc:ZDB-GENE-030826-16]
78. ptmab ENSDARG00000101766 220.78 1654.87 prothymosin alpha b [Source:ZFIN;Acc:ZDB-GENE-030131-8681]
79. rplp2l ENSDARG00000011201 218.68 1639.13 ribosomal protein, large P2, like [Source:ZFIN;Acc:ZDB-GENE-070327-2]
80. rps4x ENSDARG00000014690 218.68 1639.13 ribosomal protein S4 X-linked [Source:ZFIN;Acc:ZDB-GENE-040927-19]
81. myhz1.3 ENSDARG00000067997 217.64 1631.34 myosin, heavy polypeptide 1.3, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-070705-74]
82. rps10 ENSDARG00000034897 217.64 1631.34 ribosomal protein S10 [Source:ZFIN;Acc:ZDB-GENE-040426-1481]
83. rpl6 ENSDARG00000058451 216.59 1623.47 ribosomal protein L6 [Source:ZFIN;Acc:ZDB-GENE-030131-8671]
84. rps6 ENSDARG00000019778 216.59 1623.47 ribosomal protein S6 [Source:ZFIN;Acc:ZDB-GENE-040801-8]
85. acta1b ENSDARG00000055618 215.54 1615.60 actin, alpha 1b, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-030131-55]
86. aldoab ENSDARG00000034470 208.22 1560.73 aldolase a, fructose-bisphosphate, b [Source:ZFIN;Acc:ZDB-GENE-040426-2299]
87. zgc:92533 zgc:92533 208.22 1560.73
88. rplp0 ENSDARG00000051783 201.94 1513.66 ribosomal protein, large, P0 [Source:ZFIN;Acc:ZDB-GENE-000629-1]
89. smyhc1 ENSDARG00000099959, ENSDARG00000115916 201.94 1513.66 slow myosin heavy chain 1 [Source:ZFIN;Acc:ZDB-GENE-030131-271]
90. krt8 ENSDARG00000058358, ENSDARG00000109279 197.76 1482.33 keratin 8 [Source:ZFIN;Acc:ZDB-GENE-030411-5]
91. rpl15 ENSDARG00000009285 197.76 1482.33 ribosomal protein L15 [Source:ZFIN;Acc:ZDB-GENE-040801-183]
92. rps9 ENSDARG00000011405, ENSDARG00000113248 194.62 1458.79 ribosomal protein S9 [Source:ZFIN;Acc:ZDB-GENE-010724-15]
93. hsp90ab1 ENSDARG00000029150 193.57 1450.92 heat shock protein 90, alpha (cytosolic), class B member 1 [Source:ZFIN;Acc:ZDB-GENE-990415-95]
94. tnni2b.1 ENSDARG00000035958 193.57 1450.92 troponin I type 2b (skeletal, fast), tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-050417-49]
95. myhz2 ENSDARG00000012944 190.43 1427.38 myosin, heavy polypeptide 2, fast muscle specific [Source:ZFIN;Acc:ZDB-GENE-020604-1]
96. AL954137.2 ENSDARG00000114408 187.29 1403.85
97. rpl23a ENSDARG00000006316 186.25 1396.05 ribosomal protein L23a [Source:ZFIN;Acc:ZDB-GENE-030131-7479]
98. atp1b1a ENSDARG00000013144 185.20 1388.18 ATPase Na+/K+ transporting subunit beta 1a [Source:ZFIN;Acc:ZDB-GENE-001127-3]
99. mt-co1 ENSDARG00000063905 185.20 1388.18 cytochrome c oxidase I, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-14]
100. cirbp cirbp 184.15 1380.31
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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