Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Zebrafish_28hpf_whole1, section s32.

Sample reads: 133,406. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. AC024175.4 AC024175.4 25984.59 194777.69
2. krt4 ENSDARG00000017624, ENSDARG00000115790 2742.95 20560.86 keratin 4 [Source:ZFIN;Acc:ZDB-GENE-000607-83]
3. tpma ENSDARG00000033683 2583.12 19362.79 alpha-tropomyosin [Source:ZFIN;Acc:ZDB-GENE-990415-269]
4. ckmb ENSDARG00000040565 1559.38 11688.94 creatine kinase, muscle b [Source:ZFIN;Acc:ZDB-GENE-040426-2128]
5. mt-co2 ENSDARG00000063908 1531.30 11478.46 cytochrome c oxidase II, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-15]
6. mt-nd2 ENSDARG00000063899 1399.55 10490.88 NADH dehydrogenase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-8]
7. mt-atp6 ENSDARG00000063911 1250.53 9373.84 ATP synthase 6, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-18]
8. tmsb4x ENSDARG00000077777 1207.33 9050.02 thymosin beta 4 X-linked [Source:ZFIN;Acc:ZDB-GENE-030131-8304]
9. mt-nd4 ENSDARG00000063917 1112.30 8337.68 NADH dehydrogenase 4, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-10]
10. actc1b ENSDARG00000099197 974.07 7301.52 actin, alpha, cardiac muscle 1b [Source:ZFIN;Acc:ZDB-GENE-000322-1]
11. ckma ENSDARG00000035327, ENSDARG00000114671 930.88 6977.78 creatine kinase, muscle a [Source:ZFIN;Acc:ZDB-GENE-980526-109]
12. atp2a1 ENSDARG00000020574 820.73 6152.10 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 1 [Source:ZFIN;Acc:ZDB-GENE-020905-1]
13. si:dkey-151g10.6 si:dkey-151g10.6 805.61 6038.77
14. mt-nd1 ENSDARG00000063895 727.85 5455.89 NADH dehydrogenase 1, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-7]
15. actb2 ENSDARG00000037870 712.73 5342.55 actin, beta 2 [Source:ZFIN;Acc:ZDB-GENE-000329-3]
16. mylz3 ENSDARG00000017441 701.94 5261.67 myosin, light polypeptide 3, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-000322-6]
17. eef1a1l1 ENSDARG00000020850 693.30 5196.90 eukaryotic translation elongation factor 1 alpha 1, like 1 [Source:ZFIN;Acc:ZDB-GENE-990415-52]
18. mt-co3 ENSDARG00000063912 654.42 4905.46 cytochrome c oxidase III, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-16]
19. mylpfa ENSDARG00000053254, ENSDARG00000112448, ENSDARG00000113256 622.02 4662.59 myosin light chain, phosphorylatable, fast skeletal muscle a [Source:ZFIN;Acc:ZDB-GENE-990712-15]
20. tnnc2 ENSDARG00000070835, ENSDARG00000111155 619.86 4646.40 troponin C type 2 (fast) [Source:ZFIN;Acc:ZDB-GENE-000322-2]
21. myhz1.3 ENSDARG00000067997 609.06 4565.45 myosin, heavy polypeptide 1.3, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-070705-74]
22. acta1a ENSDARG00000036371 596.11 4468.38 actin, alpha 1a, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-050417-267]
23. ttna ttna 563.71 4225.51
24. apoa1b ENSDARG00000101324 501.07 3755.97 apolipoprotein A-Ib [Source:ZFIN;Acc:ZDB-GENE-050302-172]
25. mt-cyb ENSDARG00000063924 485.96 3642.70 cytochrome b, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-17]
26. ppiaa ENSDARG00000009212 483.80 3626.51 peptidylprolyl isomerase Aa (cyclophilin A) [Source:ZFIN;Acc:ZDB-GENE-030131-8556]
27. pvalb2 ENSDARG00000002768, ENSDARG00000114085 475.16 3561.75 parvalbumin 2 [Source:ZFIN;Acc:ZDB-GENE-000322-4]
28. ttnb ttnb 475.16 3561.75
29. eef2b ENSDARG00000100371, ENSDARG00000109247 470.84 3529.37 eukaryotic translation elongation factor 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5128]
30. zgc:112425 zgc:112425 470.84 3529.37
31. zgc:161979_1 zgc:161979_1 464.36 3480.79
32. rpl23 ENSDARG00000053457 451.40 3383.65 ribosomal protein L23 [Source:ZFIN;Acc:ZDB-GENE-030131-8756]
33. apoc1l apoc1l 403.88 3027.44
34. rpl10a ENSDARG00000042905, ENSDARG00000115649 393.08 2946.49 ribosomal protein L10a [Source:ZFIN;Acc:ZDB-GENE-030131-2025]
35. zgc:161979 zgc:161979 386.60 2897.91
36. actb1 ENSDARG00000037746, ENSDARG00000113649 382.29 2865.60 actin, beta 1 [Source:ZFIN;Acc:ZDB-GENE-000329-1]
37. hspa8 ENSDARG00000068992, ENSDARG00000114726 380.13 2849.41 heat shock protein 8 [Source:ZFIN;Acc:ZDB-GENE-990415-92]
38. acta1b ENSDARG00000055618 373.65 2800.84 actin, alpha 1b, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-030131-55]
39. hmga1a ENSDARG00000028335 365.01 2736.08 high mobility group AT-hook 1a [Source:ZFIN;Acc:ZDB-GENE-010502-1]
40. rpl21 ENSDARG00000010516, ENSDARG00000110263 356.37 2671.31 ribosomal protein L21 [Source:ZFIN;Acc:ZDB-GENE-030131-8512]
41. tnnt3a ENSDARG00000030270 354.21 2655.12 troponin T type 3a (skeletal, fast) [Source:ZFIN;Acc:ZDB-GENE-000322-3]
42. rps23 ENSDARG00000021838 352.05 2638.93 ribosomal protein S23 [Source:ZFIN;Acc:ZDB-GENE-080220-50]
43. myl10 ENSDARG00000062592 349.89 2622.74 myosin, light chain 10, regulatory [Source:ZFIN;Acc:ZDB-GENE-050417-421]
44. apoa2 ENSDARG00000015866 341.25 2557.97 apolipoprotein A-II [Source:ZFIN;Acc:ZDB-GENE-030131-1046]
45. rpl8 ENSDARG00000014867 326.13 2444.64 ribosomal protein L8 [Source:ZFIN;Acc:ZDB-GENE-040426-1670]
46. rps26l ENSDARG00000030408 326.13 2444.64 ribosomal protein S26, like [Source:ZFIN;Acc:ZDB-GENE-040426-1706]
47. zgc:66286 zgc:66286 321.81 2412.25
48. btf3 ENSDARG00000035400, ENSDARG00000116462 319.65 2396.06 basic transcription factor 3 [Source:ZFIN;Acc:ZDB-GENE-030131-8731]
49. myl1 ENSDARG00000014196 317.49 2379.87 myosin, light chain 1, alkali; skeletal, fast [Source:ZFIN;Acc:ZDB-GENE-030131-8109]
50. rps14 ENSDARG00000036629 311.01 2331.30 ribosomal protein S14 [Source:ZFIN;Acc:ZDB-GENE-030131-8631]
51. rpl26 ENSDARG00000102317 293.73 2201.77 ribosomal protein L26 [Source:ZFIN;Acc:ZDB-GENE-040426-2117]
52. rpl18a ENSDARG00000025073 291.57 2185.58 ribosomal protein L18a [Source:ZFIN;Acc:ZDB-GENE-040426-1071]
53. rpl9 ENSDARG00000037350, ENSDARG00000112384 291.57 2185.58 ribosomal protein L9 [Source:ZFIN;Acc:ZDB-GENE-030131-8646]
54. tnnt3b ENSDARG00000068457 267.82 2007.55 troponin T type 3b (skeletal, fast) [Source:ZFIN;Acc:ZDB-GENE-030520-2]
55. rps27a ENSDARG00000032725, ENSDARG00000114059 263.50 1975.17 ribosomal protein S27a [Source:ZFIN;Acc:ZDB-GENE-030131-10018]
56. rps15 ENSDARG00000070849, ENSDARG00000110979 254.86 1910.40 ribosomal protein S15 [Source:ZFIN;Acc:ZDB-GENE-030131-9092]
57. apobb apobb 252.70 1894.21
58. hsp90aa1.1 ENSDARG00000010478 252.70 1894.21 heat shock protein 90, alpha (cytosolic), class A member 1, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-990415-94]
59. tnni2a.4 ENSDARG00000029069 246.22 1845.64 troponin I type 2a (skeletal, fast), tandem duplicate 4 [Source:ZFIN;Acc:ZDB-GENE-040625-119]
60. lama2 ENSDARG00000099390 244.06 1829.45 laminin, alpha 2 [Source:ZFIN;Acc:ZDB-GENE-060119-1]
61. aldoab ENSDARG00000034470 241.90 1813.26 aldolase a, fructose-bisphosphate, b [Source:ZFIN;Acc:ZDB-GENE-040426-2299]
62. rpl36a ENSDARG00000058105, ENSDARG00000112656 241.90 1813.26 ribosomal protein L36A [Source:ZFIN;Acc:ZDB-GENE-020423-1]
63. rpl11 ENSDARG00000043509 239.74 1797.07 ribosomal protein L11 [Source:ZFIN;Acc:ZDB-GENE-040625-147]
64. myhz1.1 ENSDARG00000067990, ENSDARG00000102414 235.42 1764.68 myosin, heavy polypeptide 1.1, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-000322-5]
65. rps20 ENSDARG00000036044 235.42 1764.68 ribosomal protein S20 [Source:ZFIN;Acc:ZDB-GENE-040426-2284]
66. rps2 ENSDARG00000077291 233.26 1748.49 ribosomal protein S2 [Source:ZFIN;Acc:ZDB-GENE-040426-2454]
67. RPL29 ENSDARG00000077717 231.10 1732.30 ribosomal protein L29 [Source:ZFIN;Acc:ZDB-GENE-040801-167]
68. apoeb ENSDARG00000040295 231.10 1732.30 apolipoprotein Eb [Source:ZFIN;Acc:ZDB-GENE-980526-368]
69. si:dkey-150i13.2 ENSDARG00000071052 231.10 1732.30 si:dkey-150i13.2 [Source:ZFIN;Acc:ZDB-GENE-090312-157]
70. rpl19 ENSDARG00000013307 226.78 1699.92 ribosomal protein L19 [Source:ZFIN;Acc:ZDB-GENE-040426-2290]
71. rps15a ENSDARG00000010160 226.78 1699.92 ribosomal protein S15a [Source:ZFIN;Acc:ZDB-GENE-030131-8708]
72. rplp1 ENSDARG00000021864 222.46 1667.54 ribosomal protein, large, P1 [Source:ZFIN;Acc:ZDB-GENE-030131-8663]
73. rps5 ENSDARG00000043453 218.14 1635.15 ribosomal protein S5 [Source:ZFIN;Acc:ZDB-GENE-020419-12]
74. rps12 ENSDARG00000036875, ENSDARG00000115157 215.98 1618.96 ribosomal protein S12 [Source:ZFIN;Acc:ZDB-GENE-030131-8951]
75. fabp3 ENSDARG00000023290 211.66 1586.58 fatty acid binding protein 3, muscle and heart [Source:ZFIN;Acc:ZDB-GENE-020318-2]
76. tpm3 ENSDARG00000005162 209.50 1570.39 tropomyosin 3 [Source:ZFIN;Acc:ZDB-GENE-030826-16]
77. rpl36 ENSDARG00000100588 207.34 1554.20 ribosomal protein L36 [Source:ZFIN;Acc:ZDB-GENE-040622-2]
78. rpl18 ENSDARG00000029533 205.18 1538.01 ribosomal protein L18 [Source:ZFIN;Acc:ZDB-GENE-040801-165]
79. rpl6 ENSDARG00000058451 205.18 1538.01 ribosomal protein L6 [Source:ZFIN;Acc:ZDB-GENE-030131-8671]
80. zgc:92533 zgc:92533 205.18 1538.01
81. mt-co1 ENSDARG00000063905 203.02 1521.82 cytochrome c oxidase I, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-14]
82. rplp0 ENSDARG00000051783 203.02 1521.82 ribosomal protein, large, P0 [Source:ZFIN;Acc:ZDB-GENE-000629-1]
83. si:dkeyp-86f7.3 si:dkeyp-86f7.3 200.86 1505.62
84. rpl27 ENSDARG00000015128 198.70 1489.43 ribosomal protein L27 [Source:ZFIN;Acc:ZDB-GENE-030131-4343]
85. eif5a ENSDARG00000017235 196.54 1473.24 eukaryotic translation initiation factor 5A [Source:ZFIN;Acc:ZDB-GENE-040426-2229]
86. rps6 ENSDARG00000019778 196.54 1473.24 ribosomal protein S6 [Source:ZFIN;Acc:ZDB-GENE-040801-8]
87. apoa1a ENSDARG00000012076, ENSDARG00000110395 192.22 1440.86 apolipoprotein A-Ia [Source:ZFIN;Acc:ZDB-GENE-990415-14]
88. rpl35 ENSDARG00000018334 192.22 1440.86 ribosomal protein L35 [Source:ZFIN;Acc:ZDB-GENE-020419-2]
89. tnni2b.1 ENSDARG00000035958 187.90 1408.48 troponin I type 2b (skeletal, fast), tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-050417-49]
90. cyt1l ENSDARG00000036832 185.74 1392.29 type I cytokeratin, enveloping layer, like [Source:ZFIN;Acc:ZDB-GENE-061026-4]
91. rpl39 ENSDARG00000036316, ENSDARG00000117167 185.74 1392.29 ribosomal protein L39 [Source:ZFIN;Acc:ZDB-GENE-040625-51]
92. rps10 ENSDARG00000034897 185.74 1392.29 ribosomal protein S10 [Source:ZFIN;Acc:ZDB-GENE-040426-1481]
93. pvalb1 ENSDARG00000037789 183.58 1376.10 parvalbumin 1 [Source:ZFIN;Acc:ZDB-GENE-040625-57]
94. rps19 ENSDARG00000030602 179.26 1343.71 ribosomal protein S19 [Source:ZFIN;Acc:ZDB-GENE-040426-1716]
95. smyhc1 ENSDARG00000099959, ENSDARG00000115916 179.26 1343.71 slow myosin heavy chain 1 [Source:ZFIN;Acc:ZDB-GENE-030131-271]
96. AL954137.2 ENSDARG00000114408 174.94 1311.33
97. pcna ENSDARG00000054155 174.94 1311.33 proliferating cell nuclear antigen [Source:ZFIN;Acc:ZDB-GENE-000210-8]
98. rps9 ENSDARG00000011405, ENSDARG00000113248 174.94 1311.33 ribosomal protein S9 [Source:ZFIN;Acc:ZDB-GENE-010724-15]
99. faua ENSDARG00000099022 170.62 1278.95 Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed a [Source:ZFIN;Acc:ZDB-GENE-040426-1700]
100. rpl15 ENSDARG00000009285 170.62 1278.95 ribosomal protein L15 [Source:ZFIN;Acc:ZDB-GENE-040801-183]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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