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Experiment Zebrafish_28hpf_whole1, section s3.

Sample reads: 133,404. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. AC024175.4 AC024175.4 15835.99 118707.34
2. krt4 ENSDARG00000017624, ENSDARG00000115790 2787.13 20892.46 keratin 4 [Source:ZFIN;Acc:ZDB-GENE-000607-83]
3. actb2 ENSDARG00000037870 1520.26 11395.94 actin, beta 2 [Source:ZFIN;Acc:ZDB-GENE-000329-3]
4. mt-atp6 ENSDARG00000063911 1140.19 8546.92 ATP synthase 6, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-18]
5. eef1a1l1 ENSDARG00000020850 1013.50 7597.24 eukaryotic translation elongation factor 1 alpha 1, like 1 [Source:ZFIN;Acc:ZDB-GENE-990415-52]
6. mt-co2 ENSDARG00000063908 1013.50 7597.24 cytochrome c oxidase II, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-15]
7. hmga1a ENSDARG00000028335 886.82 6647.65 high mobility group AT-hook 1a [Source:ZFIN;Acc:ZDB-GENE-010502-1]
8. mt-nd4 ENSDARG00000063917 886.82 6647.65 NADH dehydrogenase 4, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-10]
9. ppiaa ENSDARG00000009212 886.82 6647.65 peptidylprolyl isomerase Aa (cyclophilin A) [Source:ZFIN;Acc:ZDB-GENE-030131-8556]
10. hsp90ab1 ENSDARG00000029150 760.13 5697.97 heat shock protein 90, alpha (cytosolic), class B member 1 [Source:ZFIN;Acc:ZDB-GENE-990415-95]
11. rpl9 ENSDARG00000037350, ENSDARG00000112384 760.13 5697.97 ribosomal protein L9 [Source:ZFIN;Acc:ZDB-GENE-030131-8646]
12. seta ENSDARG00000031495 760.13 5697.97 SET nuclear proto-oncogene a [Source:ZFIN;Acc:ZDB-GENE-030131-2221]
13. zgc:112425 zgc:112425 760.13 5697.97
14. ATP5B 633.44 4748.30 ATP synthase, H+ transporting, mitochondrial F1 complex, beta polypeptide
15. BX511252.1 BX511252.1 633.44 4748.30
16. hspa8 ENSDARG00000068992, ENSDARG00000114726 633.44 4748.30 heat shock protein 8 [Source:ZFIN;Acc:ZDB-GENE-990415-92]
17. id1 ENSDARG00000040764 633.44 4748.30 inhibitor of DNA binding 1 [Source:ZFIN;Acc:ZDB-GENE-990415-96]
18. mt-nd1 ENSDARG00000063895 633.44 4748.30 NADH dehydrogenase 1, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-7]
19. oaz1b ENSDARG00000104782 633.44 4748.30 ornithine decarboxylase antizyme 1b [Source:ZFIN;Acc:ZDB-GENE-020731-5]
20. ptmab ENSDARG00000101766 633.44 4748.30 prothymosin alpha b [Source:ZFIN;Acc:ZDB-GENE-030131-8681]
21. rpl26 ENSDARG00000102317 633.44 4748.30 ribosomal protein L26 [Source:ZFIN;Acc:ZDB-GENE-040426-2117]
22. tmsb4x ENSDARG00000077777 633.44 4748.30 thymosin beta 4 X-linked [Source:ZFIN;Acc:ZDB-GENE-030131-8304]
23. atf4b1 atf4b1 506.75 3798.62
24. fabp3 ENSDARG00000023290 506.75 3798.62 fatty acid binding protein 3, muscle and heart [Source:ZFIN;Acc:ZDB-GENE-020318-2]
25. npm1a ENSDARG00000014329, ENSDARG00000113199 506.75 3798.62 nucleophosmin 1a [Source:ZFIN;Acc:ZDB-GENE-021028-1]
26. puf60b ENSDARG00000001241 506.75 3798.62 poly-U binding splicing factor b [Source:ZFIN;Acc:ZDB-GENE-040625-116]
27. rps27.1 ENSDARG00000023298 506.75 3798.62 ribosomal protein S27, isoform 1 [Source:ZFIN;Acc:ZDB-GENE-050522-549]
28. rps9 ENSDARG00000011405, ENSDARG00000113248 506.75 3798.62 ribosomal protein S9 [Source:ZFIN;Acc:ZDB-GENE-010724-15]
29. si:dkey-151g10.6 si:dkey-151g10.6 506.75 3798.62
30. si:dkeyp-86f7.3 si:dkeyp-86f7.3 506.75 3798.62
31. srsf2a ENSDARG00000057484 506.75 3798.62 serine/arginine-rich splicing factor 2a [Source:ZFIN;Acc:ZDB-GENE-040426-2706]
32. AL954137.2 ENSDARG00000114408 380.06 2848.95
33. DALRD3 ENSDARG00000068602 380.06 2848.95 DALR anticodon binding domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-061103-415]
34. cyt1l ENSDARG00000036832 380.06 2848.95 type I cytokeratin, enveloping layer, like [Source:ZFIN;Acc:ZDB-GENE-061026-4]
35. dbi ENSDARG00000026369 380.06 2848.95 diazepam binding inhibitor (GABA receptor modulator, acyl-CoA binding protein) [Source:ZFIN;Acc:ZDB-GENE-040426-1861]
36. eef2b ENSDARG00000100371, ENSDARG00000109247 380.06 2848.95 eukaryotic translation elongation factor 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5128]
37. fth1a ENSDARG00000015551 380.06 2848.95 ferritin, heavy polypeptide 1a [Source:ZFIN;Acc:ZDB-GENE-000831-2]
38. gars ENSDARG00000059070 380.06 2848.95 glycyl-tRNA synthetase [Source:ZFIN;Acc:ZDB-GENE-030131-9174]
39. h3f3a 380.06 2848.95 H3 histone, family 3A, transcript variant X1
40. h3f3d ENSDARG00000045248 380.06 2848.95 H3 histone, family 3D [Source:ZFIN;Acc:ZDB-GENE-040426-1023]
41. mt-co3 ENSDARG00000063912 380.06 2848.95 cytochrome c oxidase III, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-16]
42. mt-nd2 ENSDARG00000063899 380.06 2848.95 NADH dehydrogenase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-8]
43. mylpfa ENSDARG00000053254, ENSDARG00000112448, ENSDARG00000113256 380.06 2848.95 myosin light chain, phosphorylatable, fast skeletal muscle a [Source:ZFIN;Acc:ZDB-GENE-990712-15]
44. nono ENSDARG00000020482, ENSDARG00000115783 380.06 2848.95 non-POU domain containing, octamer-binding [Source:ZFIN;Acc:ZDB-GENE-030131-713]
45. pabpc1a ENSDARG00000017219 380.06 2848.95 poly(A) binding protein, cytoplasmic 1a [Source:ZFIN;Acc:ZDB-GENE-030131-3238]
46. pbx4 ENSDARG00000052150 380.06 2848.95 pre-B-cell leukemia transcription factor 4 [Source:ZFIN;Acc:ZDB-GENE-000201-18]
47. pfn2l ENSDARG00000012682 380.06 2848.95 profilin 2 like [Source:ZFIN;Acc:ZDB-GENE-030131-34]
48. psmc6 ENSDARG00000037038, ENSDARG00000111223, ENSDARG00000114650 380.06 2848.95 proteasome 26S subunit, ATPase 6 [Source:ZFIN;Acc:ZDB-GENE-030131-304]
49. rpl19 ENSDARG00000013307 380.06 2848.95 ribosomal protein L19 [Source:ZFIN;Acc:ZDB-GENE-040426-2290]
50. rpl36 ENSDARG00000100588 380.06 2848.95 ribosomal protein L36 [Source:ZFIN;Acc:ZDB-GENE-040622-2]
51. rplp1 ENSDARG00000021864 380.06 2848.95 ribosomal protein, large, P1 [Source:ZFIN;Acc:ZDB-GENE-030131-8663]
52. rps15a ENSDARG00000010160 380.06 2848.95 ribosomal protein S15a [Source:ZFIN;Acc:ZDB-GENE-030131-8708]
53. rps2 ENSDARG00000077291 380.06 2848.95 ribosomal protein S2 [Source:ZFIN;Acc:ZDB-GENE-040426-2454]
54. rps27a ENSDARG00000032725, ENSDARG00000114059 380.06 2848.95 ribosomal protein S27a [Source:ZFIN;Acc:ZDB-GENE-030131-10018]
55. rps3a ENSDARG00000035692, ENSDARG00000114628, ENSDARG00000115378 380.06 2848.95 ribosomal protein S3A [Source:ZFIN;Acc:ZDB-GENE-030131-9184]
56. rps6 ENSDARG00000019778 380.06 2848.95 ribosomal protein S6 [Source:ZFIN;Acc:ZDB-GENE-040801-8]
57. si:dkey-150i13.2 ENSDARG00000071052 380.06 2848.95 si:dkey-150i13.2 [Source:ZFIN;Acc:ZDB-GENE-090312-157]
58. ssbp4 ENSDARG00000056483 380.06 2848.95 single stranded DNA binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-030131-469]
59. ube4b ENSDARG00000037017 380.06 2848.95 ubiquitination factor E4B, UFD2 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-020205-1]
60. zgc:161979_1 zgc:161979_1 380.06 2848.95
61. zranb2 ENSDARG00000044332 380.06 2848.95 zinc finger, RAN-binding domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2743]
62. AC024175.17 AC024175.17 253.38 1899.35
63. GANAB_2 GANAB_2 253.38 1899.35
64. RPL29 ENSDARG00000077717 253.38 1899.35 ribosomal protein L29 [Source:ZFIN;Acc:ZDB-GENE-040801-167]
65. RPL37A RPL37A 253.38 1899.35
66. TEAD3 TEAD3 253.38 1899.35
67. actc1b ENSDARG00000099197 253.38 1899.35 actin, alpha, cardiac muscle 1b [Source:ZFIN;Acc:ZDB-GENE-000322-1]
68. adnp2b ENSDARG00000028431 253.38 1899.35 ADNP homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5930]
69. anp32b ENSDARG00000023330 253.38 1899.35 acidic (leucine-rich) nuclear phosphoprotein 32 family, member B [Source:ZFIN;Acc:ZDB-GENE-030131-719]
70. atp5g3b 253.38 1899.35 ATP synthase, H+ transporting, mitochondrial F0 complex, subunit c3 (subunit 9) b, transcript variant X1
71. brap ENSDARG00000008560 253.38 1899.35 BRCA1 associated protein [Source:ZFIN;Acc:ZDB-GENE-040718-168]
72. btf3 ENSDARG00000035400, ENSDARG00000116462 253.38 1899.35 basic transcription factor 3 [Source:ZFIN;Acc:ZDB-GENE-030131-8731]
73. bzw1a ENSDARG00000010481 253.38 1899.35 basic leucine zipper and W2 domains 1a [Source:ZFIN;Acc:ZDB-GENE-030131-3951]
74. ccnd1 ENSDARG00000101637 253.38 1899.35 cyclin D1 [Source:ZFIN;Acc:ZDB-GENE-980526-176]
75. cd63 ENSDARG00000025147, ENSDARG00000115979 253.38 1899.35 CD63 molecule [Source:ZFIN;Acc:ZDB-GENE-030131-180]
76. ckma ENSDARG00000035327, ENSDARG00000114671 253.38 1899.35 creatine kinase, muscle a [Source:ZFIN;Acc:ZDB-GENE-980526-109]
77. clk2a ENSDARG00000062954 253.38 1899.35 CDC-like kinase 2a [Source:ZFIN;Acc:ZDB-GENE-030131-298]
78. eaf2 ENSDARG00000010432 253.38 1899.35 ELL associated factor 2 [Source:ZFIN;Acc:ZDB-GENE-040625-179]
79. eif3ba ENSDARG00000059654 253.38 1899.35 eukaryotic translation initiation factor 3, subunit Ba [Source:ZFIN;Acc:ZDB-GENE-030131-2748]
80. eif3m ENSDARG00000013931 253.38 1899.35 eukaryotic translation initiation factor 3, subunit M [Source:ZFIN;Acc:ZDB-GENE-040426-2643]
81. eif3s6ip ENSDARG00000101082 253.38 1899.35 eukaryotic translation initiation factor 3, subunit 6 interacting protein [Source:ZFIN;Acc:ZDB-GENE-040426-2138]
82. eif4g2a ENSDARG00000020377, ENSDARG00000112658 253.38 1899.35 eukaryotic translation initiation factor 4, gamma 2a [Source:ZFIN;Acc:ZDB-GENE-030131-2173]
83. eif5a ENSDARG00000017235 253.38 1899.35 eukaryotic translation initiation factor 5A [Source:ZFIN;Acc:ZDB-GENE-040426-2229]
84. etf1 etf1 253.38 1899.35
85. ewsr1a ENSDARG00000020258, ENSDARG00000113252 253.38 1899.35 EWS RNA-binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-2317]
86. faua ENSDARG00000099022 253.38 1899.35 Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed a [Source:ZFIN;Acc:ZDB-GENE-040426-1700]
87. fbl ENSDARG00000053912 253.38 1899.35 fibrillarin [Source:ZFIN;Acc:ZDB-GENE-040426-1936]
88. gnb2l1 253.38 1899.35 guanine nucleotide binding protein (G protein), beta polypeptide 2-like 1
89. hist2h2l ENSDARG00000068996, ENSDARG00000112150 253.38 1899.35 histone 2, H2, like [Source:ZFIN;Acc:ZDB-GENE-031118-36]
90. hnrnpab hnrnpab 253.38 1899.35
91. igf2bp1 ENSDARG00000061478 253.38 1899.35 insulin-like growth factor 2 mRNA binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-060929-1258]
92. kif5ba ENSDARG00000074131, ENSDARG00000103394 253.38 1899.35 kinesin family member 5B, a [Source:ZFIN;Acc:ZDB-GENE-070629-2]
93. kpna3 ENSDARG00000052641 253.38 1899.35 karyopherin alpha 3 (importin alpha 4) [Source:ZFIN;Acc:ZDB-GENE-030616-541]
94. marcksb ENSDARG00000008803 253.38 1899.35 myristoylated alanine-rich protein kinase C substrate b [Source:ZFIN;Acc:ZDB-GENE-030131-1921]
95. marcksl1b ENSDARG00000035715 253.38 1899.35 MARCKS-like 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2315]
96. mdh1a mdh1a 253.38 1899.35
97. mpc2 ENSDARG00000024478 253.38 1899.35 mitochondrial pyruvate carrier 2 [Source:ZFIN;Acc:ZDB-GENE-030131-330]
98. ndufb9 ENSDARG00000041314, ENSDARG00000112557 253.38 1899.35 NADH:ubiquinone oxidoreductase subunit B9 [Source:ZFIN;Acc:ZDB-GENE-030131-8364]
99. ndufs5 ENSDARG00000006290 253.38 1899.35 NADH:ubiquinone oxidoreductase subunit S5 [Source:ZFIN;Acc:ZDB-GENE-050522-437]
100. pa2g4a ENSDARG00000039578, ENSDARG00000115881 253.38 1899.35 proliferation-associated 2G4, a [Source:ZFIN;Acc:ZDB-GENE-030616-161]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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