Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Zebrafish_28hpf_whole1, section s27.

Sample reads: 133,402. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. AC024175.4 AC024175.4 27907.45 209202.56
2. krt4 ENSDARG00000017624, ENSDARG00000115790 3714.32 27843.65 keratin 4 [Source:ZFIN;Acc:ZDB-GENE-000607-83]
3. apoa1b ENSDARG00000101324 3392.39 25430.37 apolipoprotein A-Ib [Source:ZFIN;Acc:ZDB-GENE-050302-172]
4. apoc1l apoc1l 2488.01 18650.86
5. apobb apobb 2018.40 15130.53
6. zgc:161979_1 zgc:161979_1 1933.22 14491.99
7. apoa2 ENSDARG00000015866 1866.84 13994.39 apolipoprotein A-II [Source:ZFIN;Acc:ZDB-GENE-030131-1046]
8. zgc:161979 zgc:161979 1631.20 12227.96
9. tmsb4x ENSDARG00000077777 1616.27 12116.04 thymosin beta 4 X-linked [Source:ZFIN;Acc:ZDB-GENE-030131-8304]
10. apoa1a ENSDARG00000012076, ENSDARG00000110395 1271.11 9528.62 apolipoprotein A-Ia [Source:ZFIN;Acc:ZDB-GENE-990415-14]
11. apoeb ENSDARG00000040295 1253.96 9400.06 apolipoprotein Eb [Source:ZFIN;Acc:ZDB-GENE-980526-368]
12. tpma ENSDARG00000033683 1140.02 8545.93 alpha-tropomyosin [Source:ZFIN;Acc:ZDB-GENE-990415-269]
13. mt-nd2 ENSDARG00000063899 928.16 6957.76 NADH dehydrogenase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-8]
14. mt-co2 ENSDARG00000063908 919.31 6891.42 cytochrome c oxidase II, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-15]
15. mt-atp6 ENSDARG00000063911 856.81 6422.90 ATP synthase 6, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-18]
16. mt-nd4 ENSDARG00000063917 829.71 6219.75 NADH dehydrogenase 4, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-10]
17. apoa4 apoa4 729.59 5469.22
18. bhmt ENSDARG00000013430 715.76 5365.55 betaine-homocysteine methyltransferase [Source:ZFIN;Acc:ZDB-GENE-030131-947]
19. actb2 ENSDARG00000037870 705.25 5286.76 actin, beta 2 [Source:ZFIN;Acc:ZDB-GENE-000329-3]
20. ckmb ENSDARG00000040565 665.42 4988.19 creatine kinase, muscle b [Source:ZFIN;Acc:ZDB-GENE-040426-2128]
21. fabp2 ENSDARG00000006427, ENSDARG00000110230 597.94 4482.34 fatty acid binding protein 2, intestinal [Source:ZFIN;Acc:ZDB-GENE-991019-5]
22. si:dkey-150i13.2 ENSDARG00000071052 544.29 4080.16 si:dkey-150i13.2 [Source:ZFIN;Acc:ZDB-GENE-090312-157]
23. ckma ENSDARG00000035327, ENSDARG00000114671 528.80 3964.04 creatine kinase, muscle a [Source:ZFIN;Acc:ZDB-GENE-980526-109]
24. mt-nd1 ENSDARG00000063895 491.19 3682.11 NADH dehydrogenase 1, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-7]
25. fetub ENSDARG00000053973 488.97 3665.46 fetuin B [Source:ZFIN;Acc:ZDB-GENE-050208-4]
26. eef1a1l1 ENSDARG00000020850 472.38 3541.10 eukaryotic translation elongation factor 1 alpha 1, like 1 [Source:ZFIN;Acc:ZDB-GENE-990415-52]
27. mt-co3 ENSDARG00000063912 468.51 3512.09 cytochrome c oxidase III, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-16]
28. atp2a1 ENSDARG00000020574 464.08 3478.88 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 1 [Source:ZFIN;Acc:ZDB-GENE-020905-1]
29. mt-cyb ENSDARG00000063924 432.55 3242.52 cytochrome b, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-17]
30. zgc:153129 zgc:153129 415.96 3118.16
31. actc1b ENSDARG00000099197 394.39 2956.46 actin, alpha, cardiac muscle 1b [Source:ZFIN;Acc:ZDB-GENE-000322-1]
32. si:dkey-151g10.6 si:dkey-151g10.6 392.73 2944.02
33. actb1 ENSDARG00000037746, ENSDARG00000113649 370.05 2774.01 actin, beta 1 [Source:ZFIN;Acc:ZDB-GENE-000329-1]
34. zgc:112425 zgc:112425 358.43 2686.90
35. mylpfa ENSDARG00000053254, ENSDARG00000112448, ENSDARG00000113256 332.99 2496.19 myosin light chain, phosphorylatable, fast skeletal muscle a [Source:ZFIN;Acc:ZDB-GENE-990712-15]
36. tfa ENSDARG00000016771 330.22 2475.43 transferrin-a [Source:ZFIN;Acc:ZDB-GENE-980526-35]
37. sepp1a 324.14 2429.85 selenoprotein P, plasma, 1a
38. hbbe3 ENSDARG00000038147, ENSDARG00000109344 316.39 2371.75 hemoglobin beta embryonic-3 [Source:ZFIN;Acc:ZDB-GENE-980526-287]
39. mylz3 ENSDARG00000017441 315.29 2363.51 myosin, light polypeptide 3, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-000322-6]
40. rbp4 ENSDARG00000101199 314.74 2359.38 retinol binding protein 4, plasma [Source:ZFIN;Acc:ZDB-GENE-000210-19]
41. gatm ENSDARG00000036239 311.42 2334.50 glycine amidinotransferase (L-arginine:glycine amidinotransferase) [Source:ZFIN;Acc:ZDB-GENE-021015-1]
42. ctsla ENSDARG00000007836 308.65 2313.73 cathepsin La [Source:ZFIN;Acc:ZDB-GENE-030131-106]
43. pvalb2 ENSDARG00000002768, ENSDARG00000114085 302.57 2268.15 parvalbumin 2 [Source:ZFIN;Acc:ZDB-GENE-000322-4]
44. hbae3 ENSDARG00000079305 299.80 2247.39 hemoglobin alpha embryonic-3 [Source:ZFIN;Acc:ZDB-GENE-990706-3]
45. eef2b ENSDARG00000100371, ENSDARG00000109247 294.82 2210.06 eukaryotic translation elongation factor 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5128]
46. apoc2 ENSDARG00000092155 287.08 2152.04 apolipoprotein C-II [Source:ZFIN;Acc:ZDB-GENE-030131-2168]
47. APOB APOB 278.78 2089.82
48. tnnc2 ENSDARG00000070835, ENSDARG00000111155 274.36 2056.68 troponin C type 2 (fast) [Source:ZFIN;Acc:ZDB-GENE-000322-2]
49. psap ENSDARG00000013968 261.63 1961.26 prosaposin [Source:ZFIN;Acc:ZDB-GENE-020108-1]
50. ppiaa ENSDARG00000009212 256.66 1924.00 peptidylprolyl isomerase Aa (cyclophilin A) [Source:ZFIN;Acc:ZDB-GENE-030131-8556]
51. hmga1a ENSDARG00000028335 251.12 1882.47 high mobility group AT-hook 1a [Source:ZFIN;Acc:ZDB-GENE-010502-1]
52. rpl10a ENSDARG00000042905, ENSDARG00000115649 240.61 1803.68 ribosomal protein L10a [Source:ZFIN;Acc:ZDB-GENE-030131-2025]
53. rpl18a ENSDARG00000025073 232.32 1741.54 ribosomal protein L18a [Source:ZFIN;Acc:ZDB-GENE-040426-1071]
54. hspa8 ENSDARG00000068992, ENSDARG00000114726 231.76 1737.34 heat shock protein 8 [Source:ZFIN;Acc:ZDB-GENE-990415-92]
55. cyt1l ENSDARG00000036832 230.11 1724.97 type I cytokeratin, enveloping layer, like [Source:ZFIN;Acc:ZDB-GENE-061026-4]
56. pvalb9 ENSDARG00000071601, ENSDARG00000113946 224.02 1679.32 parvalbumin 9 [Source:ZFIN;Acc:ZDB-GENE-030805-4]
57. dbi ENSDARG00000026369 214.06 1604.66 diazepam binding inhibitor (GABA receptor modulator, acyl-CoA binding protein) [Source:ZFIN;Acc:ZDB-GENE-040426-1861]
58. gamt ENSDARG00000070844, ENSDARG00000109945 214.06 1604.66 guanidinoacetate N-methyltransferase [Source:ZFIN;Acc:ZDB-GENE-051030-97]
59. rpl21 ENSDARG00000010516, ENSDARG00000110263 204.66 1534.19 ribosomal protein L21 [Source:ZFIN;Acc:ZDB-GENE-030131-8512]
60. pabpc1a ENSDARG00000017219 203.55 1525.87 poly(A) binding protein, cytoplasmic 1a [Source:ZFIN;Acc:ZDB-GENE-030131-3238]
61. hbbe1.1 ENSDARG00000113599 203.00 1521.75 hemoglobin beta embryonic-1.1 [Source:ZFIN;Acc:ZDB-GENE-030616-7]
62. mt-co1 ENSDARG00000063905 201.34 1509.30 cytochrome c oxidase I, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-14]
63. paics ENSDARG00000033539 195.26 1463.73 phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoimidazole succinocarboxamide synthetase [Source:ZFIN;Acc:ZDB-GENE-030131-9762]
64. zgc:92533 zgc:92533 193.04 1447.09
65. ckmt1 ENSDARG00000016598, ENSDARG00000113143 190.28 1426.40 creatine kinase, mitochondrial 1 [Source:ZFIN;Acc:ZDB-GENE-030131-611]
66. rpl23 ENSDARG00000053457 189.17 1418.07 ribosomal protein L23 [Source:ZFIN;Acc:ZDB-GENE-030131-8756]
67. rpl36 ENSDARG00000100588 186.96 1401.51 ribosomal protein L36 [Source:ZFIN;Acc:ZDB-GENE-040622-2]
68. ttna ttna 183.09 1372.50
69. btf3 ENSDARG00000035400, ENSDARG00000116462 181.98 1364.18 basic transcription factor 3 [Source:ZFIN;Acc:ZDB-GENE-030131-8731]
70. rpl8 ENSDARG00000014867 181.43 1360.05 ribosomal protein L8 [Source:ZFIN;Acc:ZDB-GENE-040426-1670]
71. rps14 ENSDARG00000036629 180.88 1355.93 ribosomal protein S14 [Source:ZFIN;Acc:ZDB-GENE-030131-8631]
72. myhz1.3 ENSDARG00000067997 180.32 1351.73 myosin, heavy polypeptide 1.3, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-070705-74]
73. ldhba ENSDARG00000019644 175.34 1314.40 lactate dehydrogenase Ba [Source:ZFIN;Acc:ZDB-GENE-991026-6]
74. rps26l ENSDARG00000030408 175.34 1314.40 ribosomal protein S26, like [Source:ZFIN;Acc:ZDB-GENE-040426-1706]
75. aldob ENSDARG00000053684 174.79 1310.28 aldolase b, fructose-bisphosphate [Source:ZFIN;Acc:ZDB-GENE-030131-383]
76. si:dkeyp-86f7.3 si:dkeyp-86f7.3 171.47 1285.39
77. rpl26 ENSDARG00000102317 170.92 1281.27 ribosomal protein L26 [Source:ZFIN;Acc:ZDB-GENE-040426-2117]
78. gapdh ENSDARG00000043457 166.49 1248.06 glyceraldehyde-3-phosphate dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-030115-1]
79. myl6 ENSDARG00000008494, ENSDARG00000115496 165.39 1239.81 myosin, light chain 6, alkali, smooth muscle and non-muscle [Source:ZFIN;Acc:ZDB-GENE-041010-28]
80. rps27a ENSDARG00000032725, ENSDARG00000114059 160.41 1202.48 ribosomal protein S27a [Source:ZFIN;Acc:ZDB-GENE-030131-10018]
81. pla2g12b ENSDARG00000015662 159.30 1194.16 phospholipase A2, group XIIB [Source:ZFIN;Acc:ZDB-GENE-040426-2771]
82. prdx5 ENSDARG00000055064 159.30 1194.16 peroxiredoxin 5 [Source:ZFIN;Acc:ZDB-GENE-050522-159]
83. rpl36a ENSDARG00000058105, ENSDARG00000112656 157.64 1181.72 ribosomal protein L36A [Source:ZFIN;Acc:ZDB-GENE-020423-1]
84. ahcy ENSDARG00000005191 155.98 1169.27 adenosylhomocysteinase [Source:ZFIN;Acc:ZDB-GENE-031219-6]
85. abca1b ENSDARG00000079009 155.43 1165.15 ATP-binding cassette, sub-family A (ABC1), member 1B [Source:ZFIN;Acc:ZDB-GENE-030131-9826]
86. eif5a ENSDARG00000017235 155.43 1165.15 eukaryotic translation initiation factor 5A [Source:ZFIN;Acc:ZDB-GENE-040426-2229]
87. slc43a2b ENSDARG00000061120, ENSDARG00000117188 154.88 1161.03 solute carrier family 43 (amino acid system L transporter), member 2b [Source:ZFIN;Acc:ZDB-GENE-041212-6]
88. rps23 ENSDARG00000021838 151.56 1136.14 ribosomal protein S23 [Source:ZFIN;Acc:ZDB-GENE-080220-50]
89. rpl19 ENSDARG00000013307 149.90 1123.70 ribosomal protein L19 [Source:ZFIN;Acc:ZDB-GENE-040426-2290]
90. rpl9 ENSDARG00000037350, ENSDARG00000112384 149.35 1119.57 ribosomal protein L9 [Source:ZFIN;Acc:ZDB-GENE-030131-8646]
91. acta1b ENSDARG00000055618 147.69 1107.13 actin, alpha 1b, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-030131-55]
92. atp6v1g1 ENSDARG00000022315, ENSDARG00000110951 146.58 1098.81 ATPase H+ transporting V1 subunit G1 [Source:ZFIN;Acc:ZDB-GENE-030131-6965]
93. ttnb ttnb 146.58 1098.81
94. fabp3 ENSDARG00000023290 145.48 1090.56 fatty acid binding protein 3, muscle and heart [Source:ZFIN;Acc:ZDB-GENE-020318-2]
95. npc2 ENSDARG00000090912 144.92 1086.36 Niemann-Pick disease, type C2 [Source:ZFIN;Acc:ZDB-GENE-021206-13]
96. AC024175.17 AC024175.17 144.37 1082.24
97. cfl1l ENSDARG00000012972 141.60 1061.48 cofilin 1 (non-muscle), like [Source:ZFIN;Acc:ZDB-GENE-040426-2770]
98. ptmab ENSDARG00000101766 141.05 1057.35 prothymosin alpha b [Source:ZFIN;Acc:ZDB-GENE-030131-8681]
99. gpx4a ENSDARG00000068478 138.28 1036.59 glutathione peroxidase 4a [Source:ZFIN;Acc:ZDB-GENE-030410-2]
100. rpl11 ENSDARG00000043509 137.18 1028.34 ribosomal protein L11 [Source:ZFIN;Acc:ZDB-GENE-040625-147]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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