Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Zebrafish_28hpf_whole1, section s26.

Sample reads: 133,408. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. AC024175.4 AC024175.4 7457.30 55899.88
2. zgc:161979_1 zgc:161979_1 4947.23 37084.41
3. krt4 ENSDARG00000017624, ENSDARG00000115790 4912.68 36825.43 keratin 4 [Source:ZFIN;Acc:ZDB-GENE-000607-83]
4. apoa2 ENSDARG00000015866 4713.11 35329.45 apolipoprotein A-II [Source:ZFIN;Acc:ZDB-GENE-030131-1046]
5. zgc:161979 zgc:161979 3999.23 29978.21
6. tmsb4x ENSDARG00000077777 3081.94 23102.21 thymosin beta 4 X-linked [Source:ZFIN;Acc:ZDB-GENE-030131-8304]
7. apoa1a ENSDARG00000012076, ENSDARG00000110395 2824.79 21174.61 apolipoprotein A-Ia [Source:ZFIN;Acc:ZDB-GENE-990415-14]
8. mt-nd4 ENSDARG00000063917 2797.93 20973.27 NADH dehydrogenase 4, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-10]
9. apobb apobb 2341.20 17549.62
10. apoc1l apoc1l 2310.50 17319.50
11. tpma ENSDARG00000033683 2110.92 15823.45 alpha-tropomyosin [Source:ZFIN;Acc:ZDB-GENE-990415-269]
12. apoa1b ENSDARG00000101324 1819.23 13636.94 apolipoprotein A-Ib [Source:ZFIN;Acc:ZDB-GENE-050302-172]
13. bhmt ENSDARG00000013430 1562.08 11709.34 betaine-homocysteine methyltransferase [Source:ZFIN;Acc:ZDB-GENE-030131-947]
14. apoa4 apoa4 1546.73 11594.28
15. mt-nd2 ENSDARG00000063899 1454.61 10903.75 NADH dehydrogenase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-8]
16. mt-atp6 ENSDARG00000063911 1255.04 9407.77 ATP synthase 6, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-18]
17. rps26l ENSDARG00000030408 1216.66 9120.08 ribosomal protein S26, like [Source:ZFIN;Acc:ZDB-GENE-040426-1706]
18. sepp1a 1109.19 8314.48 selenoprotein P, plasma, 1a
19. actc1b ENSDARG00000099197 1086.16 8141.85 actin, alpha, cardiac muscle 1b [Source:ZFIN;Acc:ZDB-GENE-000322-1]
20. apoeb ENSDARG00000040295 1043.95 7825.44 apolipoprotein Eb [Source:ZFIN;Acc:ZDB-GENE-980526-368]
21. gatm ENSDARG00000036239 752.25 5638.86 glycine amidinotransferase (L-arginine:glycine amidinotransferase) [Source:ZFIN;Acc:ZDB-GENE-021015-1]
22. atp2a1 ENSDARG00000020574 690.85 5178.61 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 1 [Source:ZFIN;Acc:ZDB-GENE-020905-1]
23. eef1a1l1 ENSDARG00000020850 568.03 4257.95 eukaryotic translation elongation factor 1 alpha 1, like 1 [Source:ZFIN;Acc:ZDB-GENE-990415-52]
24. cyt1l ENSDARG00000036832 548.84 4114.10 type I cytokeratin, enveloping layer, like [Source:ZFIN;Acc:ZDB-GENE-061026-4]
25. actb2 ENSDARG00000037870 498.94 3740.05 actin, beta 2 [Source:ZFIN;Acc:ZDB-GENE-000329-3]
26. eef2b ENSDARG00000100371, ENSDARG00000109247 498.94 3740.05 eukaryotic translation elongation factor 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5128]
27. mt-co2 ENSDARG00000063908 491.27 3682.56 cytochrome c oxidase II, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-15]
28. gamt ENSDARG00000070844, ENSDARG00000109945 483.59 3624.99 guanidinoacetate N-methyltransferase [Source:ZFIN;Acc:ZDB-GENE-051030-97]
29. fabp2 ENSDARG00000006427, ENSDARG00000110230 468.24 3509.92 fatty acid binding protein 2, intestinal [Source:ZFIN;Acc:ZDB-GENE-991019-5]
30. acta1a ENSDARG00000036371 452.89 3394.86 actin, alpha 1a, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-050417-267]
31. aldoab ENSDARG00000034470 449.05 3366.08 aldolase a, fructose-bisphosphate, b [Source:ZFIN;Acc:ZDB-GENE-040426-2299]
32. ctsla ENSDARG00000007836 429.86 3222.23 cathepsin La [Source:ZFIN;Acc:ZDB-GENE-030131-106]
33. myhz1.3 ENSDARG00000067997 429.86 3222.23 myosin, heavy polypeptide 1.3, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-070705-74]
34. rbp4 ENSDARG00000101199 414.51 3107.16 retinol binding protein 4, plasma [Source:ZFIN;Acc:ZDB-GENE-000210-19]
35. tfa ENSDARG00000016771 410.67 3078.38 transferrin-a [Source:ZFIN;Acc:ZDB-GENE-980526-35]
36. a2ml ENSDARG00000056314 406.83 3049.60 alpha-2-macroglobulin-like [Source:ZFIN;Acc:ZDB-GENE-090212-1]
37. rpl9 ENSDARG00000037350, ENSDARG00000112384 391.48 2934.53 ribosomal protein L9 [Source:ZFIN;Acc:ZDB-GENE-030131-8646]
38. APOB APOB 356.94 2675.62
39. mt-co3 ENSDARG00000063912 353.10 2646.84 cytochrome c oxidase III, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-16]
40. si:dkey-150i13.2 ENSDARG00000071052 345.42 2589.27 si:dkey-150i13.2 [Source:ZFIN;Acc:ZDB-GENE-090312-157]
41. rpl36 ENSDARG00000100588 341.59 2560.56 ribosomal protein L36 [Source:ZFIN;Acc:ZDB-GENE-040622-2]
42. mt-cyb ENSDARG00000063924 337.75 2531.77 cytochrome b, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-17]
43. ckma ENSDARG00000035327, ENSDARG00000114671 322.39 2416.63 creatine kinase, muscle a [Source:ZFIN;Acc:ZDB-GENE-980526-109]
44. myl10 ENSDARG00000062592 307.04 2301.57 myosin, light chain 10, regulatory [Source:ZFIN;Acc:ZDB-GENE-050417-421]
45. ppiaa ENSDARG00000009212 280.18 2100.23 peptidylprolyl isomerase Aa (cyclophilin A) [Source:ZFIN;Acc:ZDB-GENE-030131-8556]
46. apoc2 ENSDARG00000092155 276.34 2071.44 apolipoprotein C-II [Source:ZFIN;Acc:ZDB-GENE-030131-2168]
47. btf3 ENSDARG00000035400, ENSDARG00000116462 276.34 2071.44 basic transcription factor 3 [Source:ZFIN;Acc:ZDB-GENE-030131-8731]
48. mylpfa ENSDARG00000053254, ENSDARG00000112448, ENSDARG00000113256 272.50 2042.66 myosin light chain, phosphorylatable, fast skeletal muscle a [Source:ZFIN;Acc:ZDB-GENE-990712-15]
49. rps14 ENSDARG00000036629 268.66 2013.87 ribosomal protein S14 [Source:ZFIN;Acc:ZDB-GENE-030131-8631]
50. pvalb2 ENSDARG00000002768, ENSDARG00000114085 264.82 1985.09 parvalbumin 2 [Source:ZFIN;Acc:ZDB-GENE-000322-4]
51. zgc:113413 zgc:113413 260.99 1956.38
52. mt-nd1 ENSDARG00000063895 257.15 1927.60 NADH dehydrogenase 1, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-7]
53. ldhba ENSDARG00000019644 253.31 1898.81 lactate dehydrogenase Ba [Source:ZFIN;Acc:ZDB-GENE-991026-6]
54. tnnt3b ENSDARG00000068457 249.47 1870.03 troponin T type 3b (skeletal, fast) [Source:ZFIN;Acc:ZDB-GENE-030520-2]
55. zgc:112425 zgc:112425 237.96 1783.75
56. rpl18a ENSDARG00000025073 230.28 1726.18 ribosomal protein L18a [Source:ZFIN;Acc:ZDB-GENE-040426-1071]
57. prdx5 ENSDARG00000055064 226.44 1697.39 peroxiredoxin 5 [Source:ZFIN;Acc:ZDB-GENE-050522-159]
58. rpl18 ENSDARG00000029533 226.44 1697.39 ribosomal protein L18 [Source:ZFIN;Acc:ZDB-GENE-040801-165]
59. tnnc2 ENSDARG00000070835, ENSDARG00000111155 226.44 1697.39 troponin C type 2 (fast) [Source:ZFIN;Acc:ZDB-GENE-000322-2]
60. atp6v1g1 ENSDARG00000022315, ENSDARG00000110951 222.61 1668.68 ATPase H+ transporting V1 subunit G1 [Source:ZFIN;Acc:ZDB-GENE-030131-6965]
61. lama2 ENSDARG00000099390 222.61 1668.68 laminin, alpha 2 [Source:ZFIN;Acc:ZDB-GENE-060119-1]
62. rpl27 ENSDARG00000015128 222.61 1668.68 ribosomal protein L27 [Source:ZFIN;Acc:ZDB-GENE-030131-4343]
63. aldob ENSDARG00000053684 218.77 1639.90 aldolase b, fructose-bisphosphate [Source:ZFIN;Acc:ZDB-GENE-030131-383]
64. zgc:153129 zgc:153129 214.93 1611.11
65. hmga1a ENSDARG00000028335 211.09 1582.33 high mobility group AT-hook 1a [Source:ZFIN;Acc:ZDB-GENE-010502-1]
66. cox4i1 ENSDARG00000032970 207.25 1553.54 cytochrome c oxidase subunit 4I1 [Source:ZFIN;Acc:ZDB-GENE-030131-5175]
67. rpl39 ENSDARG00000036316, ENSDARG00000117167 207.25 1553.54 ribosomal protein L39 [Source:ZFIN;Acc:ZDB-GENE-040625-51]
68. ttna ttna 203.42 1524.84
69. actb1 ENSDARG00000037746, ENSDARG00000113649 199.58 1496.05 actin, beta 1 [Source:ZFIN;Acc:ZDB-GENE-000329-1]
70. psap ENSDARG00000013968 199.58 1496.05 prosaposin [Source:ZFIN;Acc:ZDB-GENE-020108-1]
71. pvalb9 ENSDARG00000071601, ENSDARG00000113946 199.58 1496.05 parvalbumin 9 [Source:ZFIN;Acc:ZDB-GENE-030805-4]
72. rps6 ENSDARG00000019778 199.58 1496.05 ribosomal protein S6 [Source:ZFIN;Acc:ZDB-GENE-040801-8]
73. ATP5B 195.74 1467.27 ATP synthase, H+ transporting, mitochondrial F1 complex, beta polypeptide
74. CU914813.1 CU914813.1 191.90 1438.48
75. anxa1a ENSDARG00000026726 191.90 1438.48 annexin A1a [Source:ZFIN;Acc:ZDB-GENE-030131-6664]
76. ctsba ENSDARG00000055120 188.06 1409.70 cathepsin Ba [Source:ZFIN;Acc:ZDB-GENE-040426-2650]
77. myhz1.1 ENSDARG00000067990, ENSDARG00000102414 188.06 1409.70 myosin, heavy polypeptide 1.1, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-000322-5]
78. si:dkey-151g10.6 si:dkey-151g10.6 188.06 1409.70
79. atp5g3b 184.23 1380.99 ATP synthase, H+ transporting, mitochondrial F0 complex, subunit c3 (subunit 9) b, transcript variant X1
80. UBC ENSDARG00000102632 176.55 1323.42 ubiquitin C [Source:ZFIN;Acc:ZDB-GENE-061110-88]
81. rpl8 ENSDARG00000014867 176.55 1323.42 ribosomal protein L8 [Source:ZFIN;Acc:ZDB-GENE-040426-1670]
82. rps15a ENSDARG00000010160 176.55 1323.42 ribosomal protein S15a [Source:ZFIN;Acc:ZDB-GENE-030131-8708]
83. rps18 ENSDARG00000100392 176.55 1323.42 ribosomal protein S18 [Source:ZFIN;Acc:ZDB-GENE-020419-20]
84. oaz1b ENSDARG00000104782 172.71 1294.63 ornithine decarboxylase antizyme 1b [Source:ZFIN;Acc:ZDB-GENE-020731-5]
85. rps15 ENSDARG00000070849, ENSDARG00000110979 172.71 1294.63 ribosomal protein S15 [Source:ZFIN;Acc:ZDB-GENE-030131-9092]
86. RPL29 ENSDARG00000077717 168.87 1265.85 ribosomal protein L29 [Source:ZFIN;Acc:ZDB-GENE-040801-167]
87. gapdh ENSDARG00000043457 168.87 1265.85 glyceraldehyde-3-phosphate dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-030115-1]
88. rpl22 ENSDARG00000070437 168.87 1265.85 ribosomal protein L22 [Source:ZFIN;Acc:ZDB-GENE-051113-276]
89. rps9 ENSDARG00000011405, ENSDARG00000113248 168.87 1265.85 ribosomal protein S9 [Source:ZFIN;Acc:ZDB-GENE-010724-15]
90. rpl26 ENSDARG00000102317 165.04 1237.14 ribosomal protein L26 [Source:ZFIN;Acc:ZDB-GENE-040426-2117]
91. si:ch1073-429i10.3 165.04 1237.14 si:ch1073-429i10.3, transcript variant X2
92. tnni2a.4 ENSDARG00000029069 165.04 1237.14 troponin I type 2a (skeletal, fast), tandem duplicate 4 [Source:ZFIN;Acc:ZDB-GENE-040625-119]
93. rpl34 ENSDARG00000029500 157.36 1179.57 ribosomal protein L34 [Source:ZFIN;Acc:ZDB-GENE-040426-1033]
94. rpl35 ENSDARG00000018334 157.36 1179.57 ribosomal protein L35 [Source:ZFIN;Acc:ZDB-GENE-020419-2]
95. rps12 ENSDARG00000036875, ENSDARG00000115157 157.36 1179.57 ribosomal protein S12 [Source:ZFIN;Acc:ZDB-GENE-030131-8951]
96. cfl1l ENSDARG00000012972 153.52 1150.79 cofilin 1 (non-muscle), like [Source:ZFIN;Acc:ZDB-GENE-040426-2770]
97. dbi ENSDARG00000026369 153.52 1150.79 diazepam binding inhibitor (GABA receptor modulator, acyl-CoA binding protein) [Source:ZFIN;Acc:ZDB-GENE-040426-1861]
98. pcna ENSDARG00000054155 149.68 1122.00 proliferating cell nuclear antigen [Source:ZFIN;Acc:ZDB-GENE-000210-8]
99. slc25a20 ENSDARG00000040401 149.68 1122.00 solute carrier family 25 (carnitine/acylcarnitine translocase), member 20 [Source:ZFIN;Acc:ZDB-GENE-040426-1869]
100. icn ENSDARG00000009978 145.85 1093.29 ictacalcin [Source:ZFIN;Acc:ZDB-GENE-030131-8599]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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