Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Zebrafish_28hpf_whole1, section s25.

Sample reads: 133,394. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. AC024175.4 AC024175.4 25305.36 189707.82
2. krt4 ENSDARG00000017624, ENSDARG00000115790 3213.17 24088.32 keratin 4 [Source:ZFIN;Acc:ZDB-GENE-000607-83]
3. apoa1b ENSDARG00000101324 2735.34 20506.15 apolipoprotein A-Ib [Source:ZFIN;Acc:ZDB-GENE-050302-172]
4. apoc1l apoc1l 1907.40 14299.29
5. tmsb4x ENSDARG00000077777 1578.01 11829.94 thymosin beta 4 X-linked [Source:ZFIN;Acc:ZDB-GENE-030131-8304]
6. zgc:161979_1 zgc:161979_1 1484.46 11128.62
7. apobb apobb 1443.01 10817.88
8. apoa2 ENSDARG00000015866 1416.12 10616.29 apolipoprotein A-II [Source:ZFIN;Acc:ZDB-GENE-030131-1046]
9. zgc:161979 zgc:161979 1206.62 9045.72
10. tpma ENSDARG00000033683 1142.20 8562.78 alpha-tropomyosin [Source:ZFIN;Acc:ZDB-GENE-990415-269]
11. apoa1a ENSDARG00000012076, ENSDARG00000110395 1097.38 8226.78 apolipoprotein A-Ia [Source:ZFIN;Acc:ZDB-GENE-990415-14]
12. mt-nd2 ENSDARG00000063899 1017.84 7630.49 NADH dehydrogenase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-8]
13. mt-co2 ENSDARG00000063908 956.22 7168.54 cytochrome c oxidase II, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-15]
14. mt-nd4 ENSDARG00000063917 929.33 6966.95 NADH dehydrogenase 4, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-10]
15. mt-atp6 ENSDARG00000063911 877.23 6576.37 ATP synthase 6, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-18]
16. apoeb ENSDARG00000040295 874.99 6559.58 apolipoprotein Eb [Source:ZFIN;Acc:ZDB-GENE-980526-368]
17. ckmb ENSDARG00000040565 704.14 5278.76 creatine kinase, muscle b [Source:ZFIN;Acc:ZDB-GENE-040426-2128]
18. he1a 653.16 4896.57 hatching enzyme 1a, transcript variant X1
19. ctslb ENSDARG00000039173, ENSDARG00000074306 645.88 4842.00 cathepsin Lb [Source:ZFIN;Acc:ZDB-GENE-980526-285]
20. bhmt ENSDARG00000013430 630.20 4724.45 betaine-homocysteine methyltransferase [Source:ZFIN;Acc:ZDB-GENE-030131-947]
21. actb2 ENSDARG00000037870 603.31 4522.86 actin, beta 2 [Source:ZFIN;Acc:ZDB-GENE-000329-3]
22. apoa4 apoa4 565.22 4237.31
23. zgc:174855 ENSDARG00000094559 522.64 3918.10 zgc:174855 [Source:ZFIN;Acc:ZDB-GENE-071004-74]
24. eef1a1l1 ENSDARG00000020850 517.60 3880.32 eukaryotic translation elongation factor 1 alpha 1, like 1 [Source:ZFIN;Acc:ZDB-GENE-990415-52]
25. si:dkey-150i13.2 ENSDARG00000071052 517.04 3876.12 si:dkey-150i13.2 [Source:ZFIN;Acc:ZDB-GENE-090312-157]
26. atp2a1 ENSDARG00000020574 515.36 3863.52 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 1 [Source:ZFIN;Acc:ZDB-GENE-020905-1]
27. mt-co3 ENSDARG00000063912 504.16 3779.56 cytochrome c oxidase III, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-16]
28. wu:fa26c03 500.24 3750.17 wu:fa26c03
29. ckma ENSDARG00000035327, ENSDARG00000114671 472.23 3540.19 creatine kinase, muscle a [Source:ZFIN;Acc:ZDB-GENE-980526-109]
30. fabp2 ENSDARG00000006427, ENSDARG00000110230 453.74 3401.57 fatty acid binding protein 2, intestinal [Source:ZFIN;Acc:ZDB-GENE-991019-5]
31. actc1b ENSDARG00000099197 429.09 3216.78 actin, alpha, cardiac muscle 1b [Source:ZFIN;Acc:ZDB-GENE-000322-1]
32. si:dkey-151g10.6 si:dkey-151g10.6 428.53 3212.58
33. CABZ01044814.2 CABZ01044814.2 422.37 3166.40
34. mylz3 ENSDARG00000017441 418.45 3137.01 myosin, light polypeptide 3, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-000322-6]
35. mt-nd1 ENSDARG00000063895 413.97 3103.43 NADH dehydrogenase 1, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-7]
36. mt-cyb ENSDARG00000063924 405.57 3040.45 cytochrome b, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-17]
37. mylpfa ENSDARG00000053254, ENSDARG00000112448, ENSDARG00000113256 385.40 2889.25 myosin light chain, phosphorylatable, fast skeletal muscle a [Source:ZFIN;Acc:ZDB-GENE-990712-15]
38. hbbe3 ENSDARG00000038147, ENSDARG00000109344 379.80 2847.26 hemoglobin beta embryonic-3 [Source:ZFIN;Acc:ZDB-GENE-980526-287]
39. fetub ENSDARG00000053973 372.52 2792.69 fetuin B [Source:ZFIN;Acc:ZDB-GENE-050208-4]
40. pvalb2 ENSDARG00000002768, ENSDARG00000114085 365.79 2742.23 parvalbumin 2 [Source:ZFIN;Acc:ZDB-GENE-000322-4]
41. zgc:112425 zgc:112425 364.67 2733.84
42. zgc:153129 zgc:153129 362.43 2717.05
43. wu:fb37b09 wu:fb37b09 347.31 2603.69
44. he1b 341.15 2557.51 hatching enzyme 1b
45. actb1 ENSDARG00000037746, ENSDARG00000113649 337.79 2532.33 actin, beta 1 [Source:ZFIN;Acc:ZDB-GENE-000329-1]
46. eef2b ENSDARG00000100371, ENSDARG00000109247 319.86 2397.91 eukaryotic translation elongation factor 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5128]
47. hmga1a ENSDARG00000028335 310.90 2330.74 high mobility group AT-hook 1a [Source:ZFIN;Acc:ZDB-GENE-010502-1]
48. gatm ENSDARG00000036239 296.33 2221.51 glycine amidinotransferase (L-arginine:glycine amidinotransferase) [Source:ZFIN;Acc:ZDB-GENE-021015-1]
49. tnnc2 ENSDARG00000070835, ENSDARG00000111155 279.53 2095.57 troponin C type 2 (fast) [Source:ZFIN;Acc:ZDB-GENE-000322-2]
50. sepp1a 277.85 2082.97 selenoprotein P, plasma, 1a
51. zgc:174153 ENSDARG00000079376 276.17 2070.38 zgc:174153 [Source:ZFIN;Acc:ZDB-GENE-080215-7]
52. si:dkey-239j18.3 ENSDARG00000089806 275.61 2066.18 si:dkey-239j18.3 [Source:ZFIN;Acc:ZDB-GENE-121214-39]
53. si:dkey-269i1.3 275.61 2066.18 si:dkey-269i1.3
54. tfa ENSDARG00000016771 271.12 2032.52 transferrin-a [Source:ZFIN;Acc:ZDB-GENE-980526-35]
55. hbae3 ENSDARG00000079305 261.04 1956.95 hemoglobin alpha embryonic-3 [Source:ZFIN;Acc:ZDB-GENE-990706-3]
56. ppiaa ENSDARG00000009212 250.96 1881.38 peptidylprolyl isomerase Aa (cyclophilin A) [Source:ZFIN;Acc:ZDB-GENE-030131-8556]
57. ttna ttna 249.28 1868.79
58. rbp4 ENSDARG00000101199 248.72 1864.59 retinol binding protein 4, plasma [Source:ZFIN;Acc:ZDB-GENE-000210-19]
59. rpl23 ENSDARG00000053457 236.95 1776.35 ribosomal protein L23 [Source:ZFIN;Acc:ZDB-GENE-030131-8756]
60. rpl10a ENSDARG00000042905, ENSDARG00000115649 234.15 1755.36 ribosomal protein L10a [Source:ZFIN;Acc:ZDB-GENE-030131-2025]
61. hspa8 ENSDARG00000068992, ENSDARG00000114726 229.67 1721.78 heat shock protein 8 [Source:ZFIN;Acc:ZDB-GENE-990415-92]
62. lama2 ENSDARG00000099390 225.19 1688.19 laminin, alpha 2 [Source:ZFIN;Acc:ZDB-GENE-060119-1]
63. cyt1l ENSDARG00000036832 224.63 1683.99 type I cytokeratin, enveloping layer, like [Source:ZFIN;Acc:ZDB-GENE-061026-4]
64. ctsla ENSDARG00000007836 224.07 1679.80 cathepsin La [Source:ZFIN;Acc:ZDB-GENE-030131-106]
65. si:dkey-26g8.5 ENSDARG00000089750 224.07 1679.80 si:dkey-26g8.5 [Source:ZFIN;Acc:ZDB-GENE-121214-19]
66. rpl18a ENSDARG00000025073 223.51 1675.60 ribosomal protein L18a [Source:ZFIN;Acc:ZDB-GENE-040426-1071]
67. pabpc1a ENSDARG00000017219 220.71 1654.61 poly(A) binding protein, cytoplasmic 1a [Source:ZFIN;Acc:ZDB-GENE-030131-3238]
68. psap ENSDARG00000013968 220.71 1654.61 prosaposin [Source:ZFIN;Acc:ZDB-GENE-020108-1]
69. APOB APOB 220.15 1650.41
70. ttnb ttnb 216.79 1625.22
71. pvalb9 ENSDARG00000071601, ENSDARG00000113946 213.99 1604.23 parvalbumin 9 [Source:ZFIN;Acc:ZDB-GENE-030805-4]
72. btf3 ENSDARG00000035400, ENSDARG00000116462 212.31 1591.63 basic transcription factor 3 [Source:ZFIN;Acc:ZDB-GENE-030131-8731]
73. rpl8 ENSDARG00000014867 207.83 1558.05 ribosomal protein L8 [Source:ZFIN;Acc:ZDB-GENE-040426-1670]
74. hbbe1.1 ENSDARG00000113599 206.14 1545.38 hemoglobin beta embryonic-1.1 [Source:ZFIN;Acc:ZDB-GENE-030616-7]
75. gamt ENSDARG00000070844, ENSDARG00000109945 204.46 1532.78 guanidinoacetate N-methyltransferase [Source:ZFIN;Acc:ZDB-GENE-051030-97]
76. myhz1.3 ENSDARG00000067997 202.78 1520.19 myosin, heavy polypeptide 1.3, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-070705-74]
77. mt-co1 ENSDARG00000063905 196.06 1469.81 cytochrome c oxidase I, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-14]
78. apoc2 ENSDARG00000092155 195.50 1465.61 apolipoprotein C-II [Source:ZFIN;Acc:ZDB-GENE-030131-2168]
79. rpl36 ENSDARG00000100588 193.82 1453.02 ribosomal protein L36 [Source:ZFIN;Acc:ZDB-GENE-040622-2]
80. rps23 ENSDARG00000021838 192.70 1444.62 ribosomal protein S23 [Source:ZFIN;Acc:ZDB-GENE-080220-50]
81. rps14 ENSDARG00000036629 190.46 1427.83 ribosomal protein S14 [Source:ZFIN;Acc:ZDB-GENE-030131-8631]
82. rps26l ENSDARG00000030408 185.42 1390.05 ribosomal protein S26, like [Source:ZFIN;Acc:ZDB-GENE-040426-1706]
83. acta1b ENSDARG00000055618 181.50 1360.66 actin, alpha 1b, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-030131-55]
84. rpl21 ENSDARG00000010516, ENSDARG00000110263 180.94 1356.46 ribosomal protein L21 [Source:ZFIN;Acc:ZDB-GENE-030131-8512]
85. eif5a ENSDARG00000017235 179.82 1348.06 eukaryotic translation initiation factor 5A [Source:ZFIN;Acc:ZDB-GENE-040426-2229]
86. zgc:92533 zgc:92533 179.26 1343.87
87. rpl26 ENSDARG00000102317 173.65 1301.81 ribosomal protein L26 [Source:ZFIN;Acc:ZDB-GENE-040426-2117]
88. paics ENSDARG00000033539 172.53 1293.41 phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoimidazole succinocarboxamide synthetase [Source:ZFIN;Acc:ZDB-GENE-030131-9762]
89. aldob ENSDARG00000053684 169.73 1272.42 aldolase b, fructose-bisphosphate [Source:ZFIN;Acc:ZDB-GENE-030131-383]
90. rps2 ENSDARG00000077291 166.93 1251.43 ribosomal protein S2 [Source:ZFIN;Acc:ZDB-GENE-040426-2454]
91. dbi ENSDARG00000026369 164.69 1234.64 diazepam binding inhibitor (GABA receptor modulator, acyl-CoA binding protein) [Source:ZFIN;Acc:ZDB-GENE-040426-1861]
92. AC024175.17 AC024175.17 161.89 1213.65
93. rpl36a ENSDARG00000058105, ENSDARG00000112656 161.33 1209.45 ribosomal protein L36A [Source:ZFIN;Acc:ZDB-GENE-020423-1]
94. rpl9 ENSDARG00000037350, ENSDARG00000112384 159.65 1196.86 ribosomal protein L9 [Source:ZFIN;Acc:ZDB-GENE-030131-8646]
95. si:dkeyp-86f7.3 si:dkeyp-86f7.3 159.09 1192.66
96. ptmab ENSDARG00000101766 157.97 1184.26 prothymosin alpha b [Source:ZFIN;Acc:ZDB-GENE-030131-8681]
97. acta1a ENSDARG00000036371 155.17 1163.27 actin, alpha 1a, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-050417-267]
98. ahcy ENSDARG00000005191 154.05 1154.87 adenosylhomocysteinase [Source:ZFIN;Acc:ZDB-GENE-031219-6]
99. prdx5 ENSDARG00000055064 153.49 1150.68 peroxiredoxin 5 [Source:ZFIN;Acc:ZDB-GENE-050522-159]
100. rps27a ENSDARG00000032725, ENSDARG00000114059 153.49 1150.68 ribosomal protein S27a [Source:ZFIN;Acc:ZDB-GENE-030131-10018]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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