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Experiment Zebrafish_28hpf_whole1, section s24.

Sample reads: 133,412. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. AC024175.4 AC024175.4 30082.00 225491.08
2. krt4 ENSDARG00000017624, ENSDARG00000115790 3085.89 23131.46 keratin 4 [Source:ZFIN;Acc:ZDB-GENE-000607-83]
3. apoa1b ENSDARG00000101324 2019.42 15137.33 apolipoprotein A-Ib [Source:ZFIN;Acc:ZDB-GENE-050302-172]
4. tmsb4x ENSDARG00000077777 1520.14 11394.79 thymosin beta 4 X-linked [Source:ZFIN;Acc:ZDB-GENE-030131-8304]
5. mt-co2 ENSDARG00000063908 1335.20 10008.50 cytochrome c oxidase II, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-15]
6. apoa2 ENSDARG00000015866 1198.36 8982.76 apolipoprotein A-II [Source:ZFIN;Acc:ZDB-GENE-030131-1046]
7. apoc1l apoc1l 1194.40 8953.08
8. tpma ENSDARG00000033683 1155.72 8663.14 alpha-tropomyosin [Source:ZFIN;Acc:ZDB-GENE-990415-269]
9. mt-atp6 ENSDARG00000063911 1122.01 8410.45 ATP synthase 6, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-18]
10. apobb apobb 1088.79 8161.44
11. mt-nd2 ENSDARG00000063899 1031.28 7730.35 NADH dehydrogenase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-8]
12. he1a 960.37 7198.82 hatching enzyme 1a, transcript variant X1
13. zgc:161979 zgc:161979 877.58 6578.23
14. mt-nd4 ENSDARG00000063917 831.96 6236.27 NADH dehydrogenase 4, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-10]
15. ckmb ENSDARG00000040565 827.99 6206.51 creatine kinase, muscle b [Source:ZFIN;Acc:ZDB-GENE-040426-2128]
16. ctslb ENSDARG00000039173, ENSDARG00000074306 802.71 6017.02 cathepsin Lb [Source:ZFIN;Acc:ZDB-GENE-980526-285]
17. zgc:161979_1 zgc:161979_1 759.08 5689.97
18. apoa1a ENSDARG00000012076, ENSDARG00000110395 722.39 5414.95 apolipoprotein A-Ia [Source:ZFIN;Acc:ZDB-GENE-990415-14]
19. zgc:174855 ENSDARG00000094559 679.25 5091.58 zgc:174855 [Source:ZFIN;Acc:ZDB-GENE-071004-74]
20. wu:fa26c03 654.46 4905.75 wu:fa26c03
21. actb2 ENSDARG00000037870 587.53 4404.05 actin, beta 2 [Source:ZFIN;Acc:ZDB-GENE-000329-3]
22. mt-co3 ENSDARG00000063912 573.15 4296.26 cytochrome c oxidase III, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-16]
23. apoeb ENSDARG00000040295 563.23 4221.90 apolipoprotein Eb [Source:ZFIN;Acc:ZDB-GENE-980526-368]
24. CABZ01044814.2 CABZ01044814.2 554.81 4158.79
25. hbbe1.1 ENSDARG00000113599 541.42 4058.42 hemoglobin beta embryonic-1.1 [Source:ZFIN;Acc:ZDB-GENE-030616-7]
26. hbbe3 ENSDARG00000038147, ENSDARG00000109344 516.13 3868.85 hemoglobin beta embryonic-3 [Source:ZFIN;Acc:ZDB-GENE-980526-287]
27. atp2a1 ENSDARG00000020574 508.70 3813.15 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 1 [Source:ZFIN;Acc:ZDB-GENE-020905-1]
28. mt-nd1 ENSDARG00000063895 503.24 3772.23 NADH dehydrogenase 1, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-7]
29. bhmt ENSDARG00000013430 501.26 3757.39 betaine-homocysteine methyltransferase [Source:ZFIN;Acc:ZDB-GENE-030131-947]
30. si:dkey-150i13.2 ENSDARG00000071052 498.78 3738.80 si:dkey-150i13.2 [Source:ZFIN;Acc:ZDB-GENE-090312-157]
31. actc1b ENSDARG00000099197 470.52 3526.96 actin, alpha, cardiac muscle 1b [Source:ZFIN;Acc:ZDB-GENE-000322-1]
32. mylz3 ENSDARG00000017441 467.54 3504.62 myosin, light polypeptide 3, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-000322-6]
33. zgc:112425 zgc:112425 467.05 3500.95
34. hbae3 ENSDARG00000079305 465.07 3486.11 hemoglobin alpha embryonic-3 [Source:ZFIN;Acc:ZDB-GENE-990706-3]
35. he1b 460.11 3448.93 hatching enzyme 1b
36. eef1a1l1 ENSDARG00000020850 451.68 3385.74 eukaryotic translation elongation factor 1 alpha 1, like 1 [Source:ZFIN;Acc:ZDB-GENE-990415-52]
37. ckma ENSDARG00000035327, ENSDARG00000114671 432.84 3244.52 creatine kinase, muscle a [Source:ZFIN;Acc:ZDB-GENE-980526-109]
38. si:dkey-151g10.6 si:dkey-151g10.6 425.90 3192.50
39. mt-cyb ENSDARG00000063924 424.41 3181.33 cytochrome b, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-17]
40. wu:fb37b09 wu:fb37b09 410.03 3073.54
41. mylpfa ENSDARG00000053254, ENSDARG00000112448, ENSDARG00000113256 379.79 2846.86 myosin light chain, phosphorylatable, fast skeletal muscle a [Source:ZFIN;Acc:ZDB-GENE-990712-15]
42. si:dkey-269i1.3 374.83 2809.68 si:dkey-269i1.3
43. si:dkey-239j18.3 ENSDARG00000089806 364.91 2735.32 si:dkey-239j18.3 [Source:ZFIN;Acc:ZDB-GENE-121214-39]
44. pvalb2 ENSDARG00000002768, ENSDARG00000114085 336.65 2523.49 parvalbumin 2 [Source:ZFIN;Acc:ZDB-GENE-000322-4]
45. ttna ttna 321.78 2412.02
46. apoa4 apoa4 316.32 2371.10
47. eef2b ENSDARG00000100371, ENSDARG00000109247 305.42 2289.39 eukaryotic translation elongation factor 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5128]
48. zgc:174153 ENSDARG00000079376 303.93 2278.22 zgc:174153 [Source:ZFIN;Acc:ZDB-GENE-080215-7]
49. zgc:153129 zgc:153129 301.95 2263.38
50. tnnc2 ENSDARG00000070835, ENSDARG00000111155 297.98 2233.62 troponin C type 2 (fast) [Source:ZFIN;Acc:ZDB-GENE-000322-2]
51. ppiaa ENSDARG00000009212 292.03 2189.02 peptidylprolyl isomerase Aa (cyclophilin A) [Source:ZFIN;Acc:ZDB-GENE-030131-8556]
52. si:dkey-26g8.5 ENSDARG00000089750 289.05 2166.68 si:dkey-26g8.5 [Source:ZFIN;Acc:ZDB-GENE-121214-19]
53. fabp2 ENSDARG00000006427, ENSDARG00000110230 288.06 2159.26 fatty acid binding protein 2, intestinal [Source:ZFIN;Acc:ZDB-GENE-991019-5]
54. hmga1a ENSDARG00000028335 281.12 2107.24 high mobility group AT-hook 1a [Source:ZFIN;Acc:ZDB-GENE-010502-1]
55. actb1 ENSDARG00000037746, ENSDARG00000113649 280.63 2103.57 actin, beta 1 [Source:ZFIN;Acc:ZDB-GENE-000329-1]
56. rpl10a ENSDARG00000042905, ENSDARG00000115649 273.68 2051.47 ribosomal protein L10a [Source:ZFIN;Acc:ZDB-GENE-030131-2025]
57. gatm ENSDARG00000036239 265.75 1992.03 glycine amidinotransferase (L-arginine:glycine amidinotransferase) [Source:ZFIN;Acc:ZDB-GENE-021015-1]
58. ttnb ttnb 259.80 1947.43
59. rpl18a ENSDARG00000025073 243.44 1824.80 ribosomal protein L18a [Source:ZFIN;Acc:ZDB-GENE-040426-1071]
60. rpl23 ENSDARG00000053457 235.01 1761.61 ribosomal protein L23 [Source:ZFIN;Acc:ZDB-GENE-030131-8756]
61. rps26l ENSDARG00000030408 229.06 1717.01 ribosomal protein S26, like [Source:ZFIN;Acc:ZDB-GENE-040426-1706]
62. tfa ENSDARG00000016771 222.62 1668.73 transferrin-a [Source:ZFIN;Acc:ZDB-GENE-980526-35]
63. mt-co1 ENSDARG00000063905 219.64 1646.40 cytochrome c oxidase I, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-14]
64. sepp1a 217.16 1627.81 selenoprotein P, plasma, 1a
65. hspa8 ENSDARG00000068992, ENSDARG00000114726 211.21 1583.20 heat shock protein 8 [Source:ZFIN;Acc:ZDB-GENE-990415-92]
66. myhz1.3 ENSDARG00000067997 204.77 1534.93 myosin, heavy polypeptide 1.3, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-070705-74]
67. rpl36 ENSDARG00000100588 198.82 1490.33 ribosomal protein L36 [Source:ZFIN;Acc:ZDB-GENE-040622-2]
68. cyt1l ENSDARG00000036832 194.85 1460.57 type I cytokeratin, enveloping layer, like [Source:ZFIN;Acc:ZDB-GENE-061026-4]
69. rpl21 ENSDARG00000010516, ENSDARG00000110263 193.86 1453.15 ribosomal protein L21 [Source:ZFIN;Acc:ZDB-GENE-030131-8512]
70. lama2 ENSDARG00000099390 192.87 1445.73 laminin, alpha 2 [Source:ZFIN;Acc:ZDB-GENE-060119-1]
71. zgc:92533 zgc:92533 190.89 1430.89
72. rpl9 ENSDARG00000037350, ENSDARG00000112384 187.41 1404.80 ribosomal protein L9 [Source:ZFIN;Acc:ZDB-GENE-030131-8646]
73. ctsla ENSDARG00000007836 177.50 1330.52 cathepsin La [Source:ZFIN;Acc:ZDB-GENE-030131-106]
74. rps14 ENSDARG00000036629 177.50 1330.52 ribosomal protein S14 [Source:ZFIN;Acc:ZDB-GENE-030131-8631]
75. rpl8 ENSDARG00000014867 176.51 1323.10 ribosomal protein L8 [Source:ZFIN;Acc:ZDB-GENE-040426-1670]
76. eif5a ENSDARG00000017235 174.52 1308.18 eukaryotic translation initiation factor 5A [Source:ZFIN;Acc:ZDB-GENE-040426-2229]
77. rps23 ENSDARG00000021838 174.52 1308.18 ribosomal protein S23 [Source:ZFIN;Acc:ZDB-GENE-080220-50]
78. hbae1_1 174.03 1304.51 hemoglobin, alpha embryonic 1
79. rpl26 ENSDARG00000102317 172.54 1293.34 ribosomal protein L26 [Source:ZFIN;Acc:ZDB-GENE-040426-2117]
80. si:dkey-269i1.2 si:dkey-269i1.2 172.04 1289.59
81. tnnt3b ENSDARG00000068457 166.59 1248.74 troponin T type 3b (skeletal, fast) [Source:ZFIN;Acc:ZDB-GENE-030520-2]
82. tnnt3a ENSDARG00000030270 163.62 1226.48 troponin T type 3a (skeletal, fast) [Source:ZFIN;Acc:ZDB-GENE-000322-3]
83. pabpc1a ENSDARG00000017219 162.13 1215.31 poly(A) binding protein, cytoplasmic 1a [Source:ZFIN;Acc:ZDB-GENE-030131-3238]
84. rplp1 ENSDARG00000021864 161.14 1207.89 ribosomal protein, large, P1 [Source:ZFIN;Acc:ZDB-GENE-030131-8663]
85. rps27a ENSDARG00000032725, ENSDARG00000114059 160.15 1200.47 ribosomal protein S27a [Source:ZFIN;Acc:ZDB-GENE-030131-10018]
86. myl1 ENSDARG00000014196 159.15 1192.97 myosin, light chain 1, alkali; skeletal, fast [Source:ZFIN;Acc:ZDB-GENE-030131-8109]
87. pvalb9 ENSDARG00000071601, ENSDARG00000113946 157.67 1181.88 parvalbumin 9 [Source:ZFIN;Acc:ZDB-GENE-030805-4]
88. acta1a ENSDARG00000036371 157.17 1178.13 actin, alpha 1a, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-050417-267]
89. pvalb1 ENSDARG00000037789 156.67 1174.38 parvalbumin 1 [Source:ZFIN;Acc:ZDB-GENE-040625-57]
90. psap ENSDARG00000013968 156.18 1170.71 prosaposin [Source:ZFIN;Acc:ZDB-GENE-020108-1]
91. rpl36a ENSDARG00000058105, ENSDARG00000112656 155.68 1166.96 ribosomal protein L36A [Source:ZFIN;Acc:ZDB-GENE-020423-1]
92. apoc2 ENSDARG00000092155 152.71 1144.70 apolipoprotein C-II [Source:ZFIN;Acc:ZDB-GENE-030131-2168]
93. rps20 ENSDARG00000036044 152.71 1144.70 ribosomal protein S20 [Source:ZFIN;Acc:ZDB-GENE-040426-2284]
94. btf3 ENSDARG00000035400, ENSDARG00000116462 152.21 1140.95 basic transcription factor 3 [Source:ZFIN;Acc:ZDB-GENE-030131-8731]
95. fetub ENSDARG00000053973 151.72 1137.27 fetuin B [Source:ZFIN;Acc:ZDB-GENE-050208-4]
96. rplp0 ENSDARG00000051783 151.22 1133.53 ribosomal protein, large, P0 [Source:ZFIN;Acc:ZDB-GENE-000629-1]
97. acta1b ENSDARG00000055618 149.24 1118.69 actin, alpha 1b, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-030131-55]
98. rps2 ENSDARG00000077291 148.74 1114.94 ribosomal protein S2 [Source:ZFIN;Acc:ZDB-GENE-040426-2454]
99. col1a1b ENSDARG00000035809 145.77 1092.67 collagen, type I, alpha 1b [Source:ZFIN;Acc:ZDB-GENE-030131-4400]
100. tnni2a.4 ENSDARG00000029069 144.28 1081.51 troponin I type 2a (skeletal, fast), tandem duplicate 4 [Source:ZFIN;Acc:ZDB-GENE-040625-119]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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