Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Zebrafish_28hpf_trunk2, section s23.

Sample reads: 133,402. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. AC024175.4 AC024175.4 16185.81 121331.22
2. krt4 ENSDARG00000017624, ENSDARG00000115790 3915.92 29354.31 keratin 4 [Source:ZFIN;Acc:ZDB-GENE-000607-83]
3. mt-atp6 ENSDARG00000063911 1696.90 12720.21 ATP synthase 6, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-18]
4. mt-co2 ENSDARG00000063908 1566.37 11741.74 cytochrome c oxidase II, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-15]
5. apoc1l apoc1l 1435.84 10763.27
6. apoa1b ENSDARG00000101324 1305.31 9784.80 apolipoprotein A-Ib [Source:ZFIN;Acc:ZDB-GENE-050302-172]
7. apoa2 ENSDARG00000015866 1174.78 8806.32 apolipoprotein A-II [Source:ZFIN;Acc:ZDB-GENE-030131-1046]
8. eef1a1l1 ENSDARG00000020850 1174.78 8806.32 eukaryotic translation elongation factor 1 alpha 1, like 1 [Source:ZFIN;Acc:ZDB-GENE-990415-52]
9. zgc:161979 zgc:161979 1174.78 8806.32
10. actb2 ENSDARG00000037870 1044.25 7827.85 actin, beta 2 [Source:ZFIN;Acc:ZDB-GENE-000329-3]
11. apoeb ENSDARG00000040295 1044.25 7827.85 apolipoprotein Eb [Source:ZFIN;Acc:ZDB-GENE-980526-368]
12. apoa1a ENSDARG00000012076, ENSDARG00000110395 913.71 6849.30 apolipoprotein A-Ia [Source:ZFIN;Acc:ZDB-GENE-990415-14]
13. eef2b ENSDARG00000100371, ENSDARG00000109247 913.71 6849.30 eukaryotic translation elongation factor 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5128]
14. zgc:161979_1 zgc:161979_1 913.71 6849.30
15. BX511252.1 BX511252.1 783.18 5870.83
16. actb1 ENSDARG00000037746, ENSDARG00000113649 783.18 5870.83 actin, beta 1 [Source:ZFIN;Acc:ZDB-GENE-000329-1]
17. actc1b ENSDARG00000099197 783.18 5870.83 actin, alpha, cardiac muscle 1b [Source:ZFIN;Acc:ZDB-GENE-000322-1]
18. mt-nd2 ENSDARG00000063899 783.18 5870.83 NADH dehydrogenase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-8]
19. fabp2 ENSDARG00000006427, ENSDARG00000110230 652.65 4892.36 fatty acid binding protein 2, intestinal [Source:ZFIN;Acc:ZDB-GENE-991019-5]
20. hmga1a ENSDARG00000028335 652.65 4892.36 high mobility group AT-hook 1a [Source:ZFIN;Acc:ZDB-GENE-010502-1]
21. mt-co3 ENSDARG00000063912 652.65 4892.36 cytochrome c oxidase III, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-16]
22. rpl11 ENSDARG00000043509 652.65 4892.36 ribosomal protein L11 [Source:ZFIN;Acc:ZDB-GENE-040625-147]
23. rpl18 ENSDARG00000029533 652.65 4892.36 ribosomal protein L18 [Source:ZFIN;Acc:ZDB-GENE-040801-165]
24. rpl26 ENSDARG00000102317 652.65 4892.36 ribosomal protein L26 [Source:ZFIN;Acc:ZDB-GENE-040426-2117]
25. tmsb4x ENSDARG00000077777 652.65 4892.36 thymosin beta 4 X-linked [Source:ZFIN;Acc:ZDB-GENE-030131-8304]
26. tpma ENSDARG00000033683 652.65 4892.36 alpha-tropomyosin [Source:ZFIN;Acc:ZDB-GENE-990415-269]
27. akirin2 ENSDARG00000058729 522.12 3913.89 akirin 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2944]
28. apobb apobb 522.12 3913.89
29. bhmt ENSDARG00000013430 522.12 3913.89 betaine-homocysteine methyltransferase [Source:ZFIN;Acc:ZDB-GENE-030131-947]
30. cct6a ENSDARG00000021252 522.12 3913.89 chaperonin containing TCP1, subunit 6A (zeta 1) [Source:ZFIN;Acc:ZDB-GENE-011018-2]
31. fabp3 ENSDARG00000023290 522.12 3913.89 fatty acid binding protein 3, muscle and heart [Source:ZFIN;Acc:ZDB-GENE-020318-2]
32. gatm ENSDARG00000036239 522.12 3913.89 glycine amidinotransferase (L-arginine:glycine amidinotransferase) [Source:ZFIN;Acc:ZDB-GENE-021015-1]
33. hspa8 ENSDARG00000068992, ENSDARG00000114726 522.12 3913.89 heat shock protein 8 [Source:ZFIN;Acc:ZDB-GENE-990415-92]
34. myhz1.3 ENSDARG00000067997 522.12 3913.89 myosin, heavy polypeptide 1.3, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-070705-74]
35. ppiaa ENSDARG00000009212 522.12 3913.89 peptidylprolyl isomerase Aa (cyclophilin A) [Source:ZFIN;Acc:ZDB-GENE-030131-8556]
36. rpl6 ENSDARG00000058451 522.12 3913.89 ribosomal protein L6 [Source:ZFIN;Acc:ZDB-GENE-030131-8671]
37. sepp1a 522.12 3913.89 selenoprotein P, plasma, 1a
38. si:dkey-150i13.2 ENSDARG00000071052 522.12 3913.89 si:dkey-150i13.2 [Source:ZFIN;Acc:ZDB-GENE-090312-157]
39. si:dkey-151g10.6 si:dkey-151g10.6 522.12 3913.89
40. txlnba ENSDARG00000020594 522.12 3913.89 taxilin beta a [Source:ZFIN;Acc:ZDB-GENE-030131-322]
41. CABZ01111496.1 ENSDARG00000003041 391.59 2935.42 E3 ubiquitin-protein ligase pellino homolog 2-like [Source:NCBI gene;Acc:100334245]
42. anxa6 ENSDARG00000013335 391.59 2935.42 annexin A6 [Source:ZFIN;Acc:ZDB-GENE-030707-3]
43. cct4 ENSDARG00000013475 391.59 2935.42 chaperonin containing TCP1, subunit 4 (delta) [Source:ZFIN;Acc:ZDB-GENE-040426-1421]
44. cdv3 ENSDARG00000023028 391.59 2935.42 carnitine deficiency-associated gene expressed in ventricle 3 [Source:ZFIN;Acc:ZDB-GENE-030131-6034]
45. cirbp cirbp 391.59 2935.42
46. ckma ENSDARG00000035327, ENSDARG00000114671 391.59 2935.42 creatine kinase, muscle a [Source:ZFIN;Acc:ZDB-GENE-980526-109]
47. col1a1a ENSDARG00000012405, ENSDARG00000116113 391.59 2935.42 collagen, type I, alpha 1a [Source:ZFIN;Acc:ZDB-GENE-030131-9102]
48. dnajb5 ENSDARG00000052881, ENSDARG00000116664 391.59 2935.42 DnaJ (Hsp40) homolog, subfamily B, member 5 [Source:ZFIN;Acc:ZDB-GENE-070705-308]
49. eif3ea ENSDARG00000090697 391.59 2935.42 eukaryotic translation initiation factor 3, subunit E, a [Source:ZFIN;Acc:ZDB-GENE-030131-3827]
50. flot1b ENSDARG00000037998 391.59 2935.42 flotillin 1b [Source:ZFIN;Acc:ZDB-GENE-020430-2]
51. gmps ENSDARG00000079848 391.59 2935.42 guanine monophosphate synthase [Source:ZFIN;Acc:ZDB-GENE-040426-1503]
52. h1f0 ENSDARG00000038559 391.59 2935.42 H1 histone family, member 0 [Source:ZFIN;Acc:ZDB-GENE-030131-337]
53. histh1l ENSDARG00000035519 391.59 2935.42 histone H1 like [Source:ZFIN;Acc:ZDB-GENE-050417-145]
54. ier3ip1 ENSDARG00000039601 391.59 2935.42 immediate early response 3 interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-050506-106]
55. ing5b ENSDARG00000068175 391.59 2935.42 inhibitor of growth family, member 5b [Source:ZFIN;Acc:ZDB-GENE-030616-462]
56. klf6a ENSDARG00000029072 391.59 2935.42 Kruppel-like factor 6a [Source:ZFIN;Acc:ZDB-GENE-021115-9]
57. mt-nd4 ENSDARG00000063917 391.59 2935.42 NADH dehydrogenase 4, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-10]
58. rbp4 ENSDARG00000101199 391.59 2935.42 retinol binding protein 4, plasma [Source:ZFIN;Acc:ZDB-GENE-000210-19]
59. rpl21 ENSDARG00000010516, ENSDARG00000110263 391.59 2935.42 ribosomal protein L21 [Source:ZFIN;Acc:ZDB-GENE-030131-8512]
60. rpl36a ENSDARG00000058105, ENSDARG00000112656 391.59 2935.42 ribosomal protein L36A [Source:ZFIN;Acc:ZDB-GENE-020423-1]
61. rplp0 ENSDARG00000051783 391.59 2935.42 ribosomal protein, large, P0 [Source:ZFIN;Acc:ZDB-GENE-000629-1]
62. rps12 ENSDARG00000036875, ENSDARG00000115157 391.59 2935.42 ribosomal protein S12 [Source:ZFIN;Acc:ZDB-GENE-030131-8951]
63. rps14 ENSDARG00000036629 391.59 2935.42 ribosomal protein S14 [Source:ZFIN;Acc:ZDB-GENE-030131-8631]
64. rps23 ENSDARG00000021838 391.59 2935.42 ribosomal protein S23 [Source:ZFIN;Acc:ZDB-GENE-080220-50]
65. rps27a ENSDARG00000032725, ENSDARG00000114059 391.59 2935.42 ribosomal protein S27a [Source:ZFIN;Acc:ZDB-GENE-030131-10018]
66. rrm2b ENSDARG00000033367, ENSDARG00000115899 391.59 2935.42 ribonucleotide reductase M2 b [Source:ZFIN;Acc:ZDB-GENE-030616-614]
67. tbc1d23 ENSDARG00000044357, ENSDARG00000109696 391.59 2935.42 TBC1 domain family, member 23 [Source:ZFIN;Acc:ZDB-GENE-040426-1253]
68. tnnc2 ENSDARG00000070835, ENSDARG00000111155 391.59 2935.42 troponin C type 2 (fast) [Source:ZFIN;Acc:ZDB-GENE-000322-2]
69. zgc:153129 zgc:153129 391.59 2935.42
70. AC024175.17 AC024175.17 261.06 1956.94
71. CR293507.1 ENSDARG00000112572 261.06 1956.94
72. ITFG1 ENSDARG00000075584, ENSDARG00000110264 261.06 1956.94 integrin alpha FG-GAP repeat containing 1 [Source:ZFIN;Acc:ZDB-GENE-121003-3]
73. alyref ENSDARG00000077732 261.06 1956.94 Aly/REF export factor [Source:ZFIN;Acc:ZDB-GENE-070928-29]
74. anapc16 ENSDARG00000013822 261.06 1956.94 anaphase promoting complex subunit 16 [Source:ZFIN;Acc:ZDB-GENE-050417-430]
75. arid3b ENSDARG00000104034 261.06 1956.94 AT rich interactive domain 3B (BRIGHT-like) [Source:ZFIN;Acc:ZDB-GENE-070209-182]
76. ass1 261.06 1956.94 argininosuccinate synthase 1
77. atp6v0ca ENSDARG00000057853 261.06 1956.94 ATPase H+ transporting V0 subunit ca [Source:ZFIN;Acc:ZDB-GENE-020419-23]
78. atp6v0d1 ENSDARG00000069090, ENSDARG00000115876 261.06 1956.94 ATPase H+ transporting V0 subunit d1 [Source:ZFIN;Acc:ZDB-GENE-030131-1531]
79. capza1a ENSDARG00000034240 261.06 1956.94 capping actin protein of muscle Z-line subunit alpha 1a [Source:ZFIN;Acc:ZDB-GENE-030131-5237]
80. cask cask 261.06 1956.94
81. cd63 ENSDARG00000025147, ENSDARG00000115979 261.06 1956.94 CD63 molecule [Source:ZFIN;Acc:ZDB-GENE-030131-180]
82. ckmb ENSDARG00000040565 261.06 1956.94 creatine kinase, muscle b [Source:ZFIN;Acc:ZDB-GENE-040426-2128]
83. cnn2 ENSDARG00000035858 261.06 1956.94 calponin 2 [Source:ZFIN;Acc:ZDB-GENE-030131-542]
84. cycsb ENSDARG00000044562 261.06 1956.94 cytochrome c, somatic b [Source:ZFIN;Acc:ZDB-GENE-040625-38]
85. ddt ENSDARG00000044751, ENSDARG00000109625 261.06 1956.94 D-dopachrome tautomerase [Source:ZFIN;Acc:ZDB-GENE-040625-160]
86. ddx3 ddx3 261.06 1956.94
87. eif2s2 ENSDARG00000053047 261.06 1956.94 eukaryotic translation initiation factor 2, subunit 2 beta [Source:ZFIN;Acc:ZDB-GENE-030131-3085]
88. eif5a ENSDARG00000017235 261.06 1956.94 eukaryotic translation initiation factor 5A [Source:ZFIN;Acc:ZDB-GENE-040426-2229]
89. fetub ENSDARG00000053973 261.06 1956.94 fetuin B [Source:ZFIN;Acc:ZDB-GENE-050208-4]
90. gamt ENSDARG00000070844, ENSDARG00000109945 261.06 1956.94 guanidinoacetate N-methyltransferase [Source:ZFIN;Acc:ZDB-GENE-051030-97]
91. glrx ENSDARG00000028106 261.06 1956.94 glutaredoxin (thioltransferase) [Source:ZFIN;Acc:ZDB-GENE-041010-11]
92. gtf2f1 ENSDARG00000032129 261.06 1956.94 general transcription factor IIF, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4557]
93. h3f3a 261.06 1956.94 H3 histone, family 3A, transcript variant X1
94. h3f3b.1_1 ENSDARG00000020504, ENSDARG00000068434, ENSDARG00000068436 261.06 1956.94 H3 histone, family 3B.1 [Source:ZFIN;Acc:ZDB-GENE-050417-65]
95. hsp90ab1 ENSDARG00000029150 261.06 1956.94 heat shock protein 90, alpha (cytosolic), class B member 1 [Source:ZFIN;Acc:ZDB-GENE-990415-95]
96. kif3a ENSDARG00000087538, ENSDARG00000109880, ENSDARG00000117005 261.06 1956.94 kinesin family member 3A [Source:ZFIN;Acc:ZDB-GENE-050417-71]
97. lpar2b ENSDARG00000042561 261.06 1956.94 lysophosphatidic acid receptor 2b [Source:ZFIN;Acc:ZDB-GENE-051120-99]
98. mapk12a ENSDARG00000042021 261.06 1956.94 mitogen-activated protein kinase 12a [Source:ZFIN;Acc:ZDB-GENE-990415-257]
99. mt-co1 ENSDARG00000063905 261.06 1956.94 cytochrome c oxidase I, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-14]
100. mt-cyb ENSDARG00000063924 261.06 1956.94 cytochrome b, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-17]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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