Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Experiment Zebrafish_28hpf_trunk2, section s21.

Sample reads: 133,398. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. AC024175.4 AC024175.4 20809.01 155992.23
2. krt4 ENSDARG00000017624, ENSDARG00000115790 6512.99 48823.84 keratin 4 [Source:ZFIN;Acc:ZDB-GENE-000607-83]
3. zgc:161979 zgc:161979 2914.56 21848.65
4. apoc1l apoc1l 2686.61 20139.85
5. apoa1b ENSDARG00000101324 2572.63 19285.41 apolipoprotein A-Ib [Source:ZFIN;Acc:ZDB-GENE-050302-172]
6. zgc:161979_1 zgc:161979_1 2540.07 19041.33
7. apoeb ENSDARG00000040295 2409.81 18064.85 apolipoprotein Eb [Source:ZFIN;Acc:ZDB-GENE-980526-368]
8. apoa2 ENSDARG00000015866 2165.57 16233.93 apolipoprotein A-II [Source:ZFIN;Acc:ZDB-GENE-030131-1046]
9. apobb apobb 1791.07 13426.54
10. tmsb4x ENSDARG00000077777 1709.66 12816.26 thymosin beta 4 X-linked [Source:ZFIN;Acc:ZDB-GENE-030131-8304]
11. actb2 ENSDARG00000037870 1270.03 9520.63 actin, beta 2 [Source:ZFIN;Acc:ZDB-GENE-000329-3]
12. mt-nd2 ENSDARG00000063899 1139.77 8544.15 NADH dehydrogenase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-8]
13. fabp2 ENSDARG00000006427, ENSDARG00000110230 1042.08 7811.83 fatty acid binding protein 2, intestinal [Source:ZFIN;Acc:ZDB-GENE-991019-5]
14. apoa1a ENSDARG00000012076, ENSDARG00000110395 993.23 7445.63 apolipoprotein A-Ia [Source:ZFIN;Acc:ZDB-GENE-990415-14]
15. ctsla ENSDARG00000007836 944.38 7079.43 cathepsin La [Source:ZFIN;Acc:ZDB-GENE-030131-106]
16. mt-nd4 ENSDARG00000063917 911.82 6835.35 NADH dehydrogenase 4, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-10]
17. actb1 ENSDARG00000037746, ENSDARG00000113649 748.99 5614.71 actin, beta 1 [Source:ZFIN;Acc:ZDB-GENE-000329-1]
18. apoa4 apoa4 683.86 5126.47
19. eef1a1l1 ENSDARG00000020850 635.02 4760.35 eukaryotic translation elongation factor 1 alpha 1, like 1 [Source:ZFIN;Acc:ZDB-GENE-990415-52]
20. fetub ENSDARG00000053973 635.02 4760.35 fetuin B [Source:ZFIN;Acc:ZDB-GENE-050208-4]
21. mt-atp6 ENSDARG00000063911 635.02 4760.35 ATP synthase 6, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-18]
22. cfl1l ENSDARG00000012972 602.45 4516.19 cofilin 1 (non-muscle), like [Source:ZFIN;Acc:ZDB-GENE-040426-2770]
23. mt-co2 ENSDARG00000063908 553.60 4150.00 cytochrome c oxidase II, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-15]
24. rbp4 ENSDARG00000101199 537.32 4027.95 retinol binding protein 4, plasma [Source:ZFIN;Acc:ZDB-GENE-000210-19]
25. si:dkey-150i13.2 ENSDARG00000071052 521.04 3905.91 si:dkey-150i13.2 [Source:ZFIN;Acc:ZDB-GENE-090312-157]
26. mt-nd1 ENSDARG00000063895 504.76 3783.87 NADH dehydrogenase 1, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-7]
27. zgc:153129 zgc:153129 488.47 3661.76
28. si:dkey-151g10.6 si:dkey-151g10.6 472.19 3539.72
29. mt-co3 ENSDARG00000063912 455.91 3417.67 cytochrome c oxidase III, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-16]
30. eef2b ENSDARG00000100371, ENSDARG00000109247 374.50 2807.39 eukaryotic translation elongation factor 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5128]
31. tpma ENSDARG00000033683 374.50 2807.39 alpha-tropomyosin [Source:ZFIN;Acc:ZDB-GENE-990415-269]
32. bhmt ENSDARG00000013430 358.21 2685.28 betaine-homocysteine methyltransferase [Source:ZFIN;Acc:ZDB-GENE-030131-947]
33. mt-cyb ENSDARG00000063924 358.21 2685.28 cytochrome b, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-17]
34. dbi ENSDARG00000026369 341.93 2563.24 diazepam binding inhibitor (GABA receptor modulator, acyl-CoA binding protein) [Source:ZFIN;Acc:ZDB-GENE-040426-1861]
35. APOA4 APOA4 325.65 2441.20
36. APOB APOB 325.65 2441.20
37. apoc2 ENSDARG00000092155 325.65 2441.20 apolipoprotein C-II [Source:ZFIN;Acc:ZDB-GENE-030131-2168]
38. cyt1l ENSDARG00000036832 325.65 2441.20 type I cytokeratin, enveloping layer, like [Source:ZFIN;Acc:ZDB-GENE-061026-4]
39. ppiaa ENSDARG00000009212 325.65 2441.20 peptidylprolyl isomerase Aa (cyclophilin A) [Source:ZFIN;Acc:ZDB-GENE-030131-8556]
40. rpl10a ENSDARG00000042905, ENSDARG00000115649 325.65 2441.20 ribosomal protein L10a [Source:ZFIN;Acc:ZDB-GENE-030131-2025]
41. rpl8 ENSDARG00000014867 325.65 2441.20 ribosomal protein L8 [Source:ZFIN;Acc:ZDB-GENE-040426-1670]
42. hmga1a ENSDARG00000028335 309.37 2319.15 high mobility group AT-hook 1a [Source:ZFIN;Acc:ZDB-GENE-010502-1]
43. ckma ENSDARG00000035327, ENSDARG00000114671 293.08 2197.04 creatine kinase, muscle a [Source:ZFIN;Acc:ZDB-GENE-980526-109]
44. gatm ENSDARG00000036239 293.08 2197.04 glycine amidinotransferase (L-arginine:glycine amidinotransferase) [Source:ZFIN;Acc:ZDB-GENE-021015-1]
45. mt2 ENSDARG00000041623, ENSDARG00000113583 293.08 2197.04 metallothionein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4174]
46. rpl21 ENSDARG00000010516, ENSDARG00000110263 293.08 2197.04 ribosomal protein L21 [Source:ZFIN;Acc:ZDB-GENE-030131-8512]
47. btf3 ENSDARG00000035400, ENSDARG00000116462 260.52 1952.96 basic transcription factor 3 [Source:ZFIN;Acc:ZDB-GENE-030131-8731]
48. ckmb ENSDARG00000040565 260.52 1952.96 creatine kinase, muscle b [Source:ZFIN;Acc:ZDB-GENE-040426-2128]
49. sepp1a 260.52 1952.96 selenoprotein P, plasma, 1a
50. ctsba ENSDARG00000055120 244.24 1830.92 cathepsin Ba [Source:ZFIN;Acc:ZDB-GENE-040426-2650]
51. prdx5 ENSDARG00000055064 244.24 1830.92 peroxiredoxin 5 [Source:ZFIN;Acc:ZDB-GENE-050522-159]
52. rps15 ENSDARG00000070849, ENSDARG00000110979 244.24 1830.92 ribosomal protein S15 [Source:ZFIN;Acc:ZDB-GENE-030131-9092]
53. rps9 ENSDARG00000011405, ENSDARG00000113248 244.24 1830.92 ribosomal protein S9 [Source:ZFIN;Acc:ZDB-GENE-010724-15]
54. tfa ENSDARG00000016771 244.24 1830.92 transferrin-a [Source:ZFIN;Acc:ZDB-GENE-980526-35]
55. pfn1 ENSDARG00000088091 227.95 1708.80 profilin 1 [Source:ZFIN;Acc:ZDB-GENE-031002-33]
56. rpl14 ENSDARG00000103433 227.95 1708.80 ribosomal protein L14 [Source:ZFIN;Acc:ZDB-GENE-030131-2085]
57. rpl36a ENSDARG00000058105, ENSDARG00000112656 227.95 1708.80 ribosomal protein L36A [Source:ZFIN;Acc:ZDB-GENE-020423-1]
58. rplp0 ENSDARG00000051783 227.95 1708.80 ribosomal protein, large, P0 [Source:ZFIN;Acc:ZDB-GENE-000629-1]
59. zgc:92533 zgc:92533 227.95 1708.80
60. RPL37A RPL37A 211.67 1586.76
61. npc2 ENSDARG00000090912 211.67 1586.76 Niemann-Pick disease, type C2 [Source:ZFIN;Acc:ZDB-GENE-021206-13]
62. rps2 ENSDARG00000077291 211.67 1586.76 ribosomal protein S2 [Source:ZFIN;Acc:ZDB-GENE-040426-2454]
63. ssr2 ENSDARG00000005230 211.67 1586.76 signal sequence receptor, beta [Source:ZFIN;Acc:ZDB-GENE-010413-1]
64. AC024175.17 AC024175.17 195.39 1464.72
65. FP067396.1 FP067396.1 195.39 1464.72
66. atp6v1g1 ENSDARG00000022315, ENSDARG00000110951 195.39 1464.72 ATPase H+ transporting V1 subunit G1 [Source:ZFIN;Acc:ZDB-GENE-030131-6965]
67. gamt ENSDARG00000070844, ENSDARG00000109945 195.39 1464.72 guanidinoacetate N-methyltransferase [Source:ZFIN;Acc:ZDB-GENE-051030-97]
68. krt8 ENSDARG00000058358, ENSDARG00000109279 195.39 1464.72 keratin 8 [Source:ZFIN;Acc:ZDB-GENE-030411-5]
69. paics ENSDARG00000033539 195.39 1464.72 phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoimidazole succinocarboxamide synthetase [Source:ZFIN;Acc:ZDB-GENE-030131-9762]
70. rpl23 ENSDARG00000053457 195.39 1464.72 ribosomal protein L23 [Source:ZFIN;Acc:ZDB-GENE-030131-8756]
71. zgc:193505 ENSDARG00000093584, ENSDARG00000109499 195.39 1464.72 zgc:193505 [Source:ZFIN;Acc:ZDB-GENE-030131-7103]
72. ctsll ENSDARG00000011701, ENSDARG00000112885 179.11 1342.68 cathepsin L, like [Source:ZFIN;Acc:ZDB-GENE-041010-76]
73. ldhba ENSDARG00000019644 179.11 1342.68 lactate dehydrogenase Ba [Source:ZFIN;Acc:ZDB-GENE-991026-6]
74. mt-co1 ENSDARG00000063905 179.11 1342.68 cytochrome c oxidase I, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-14]
75. ptmab ENSDARG00000101766 179.11 1342.68 prothymosin alpha b [Source:ZFIN;Acc:ZDB-GENE-030131-8681]
76. rpl11 ENSDARG00000043509 179.11 1342.68 ribosomal protein L11 [Source:ZFIN;Acc:ZDB-GENE-040625-147]
77. rpl27 ENSDARG00000015128 179.11 1342.68 ribosomal protein L27 [Source:ZFIN;Acc:ZDB-GENE-030131-4343]
78. rpl9 ENSDARG00000037350, ENSDARG00000112384 179.11 1342.68 ribosomal protein L9 [Source:ZFIN;Acc:ZDB-GENE-030131-8646]
79. rplp2 ENSDARG00000101406 179.11 1342.68 ribosomal protein, large P2 [Source:ZFIN;Acc:ZDB-GENE-031018-2]
80. rps26l ENSDARG00000030408 179.11 1342.68 ribosomal protein S26, like [Source:ZFIN;Acc:ZDB-GENE-040426-1706]
81. rps6 ENSDARG00000019778 179.11 1342.68 ribosomal protein S6 [Source:ZFIN;Acc:ZDB-GENE-040801-8]
82. si:dkeyp-86f7.3 si:dkeyp-86f7.3 179.11 1342.68
83. zgc:153867 179.11 1342.68 zgc:153867, transcript variant X2
84. RPL29 ENSDARG00000077717 162.82 1220.56 ribosomal protein L29 [Source:ZFIN;Acc:ZDB-GENE-040801-167]
85. ckmt1 ENSDARG00000016598, ENSDARG00000113143 162.82 1220.56 creatine kinase, mitochondrial 1 [Source:ZFIN;Acc:ZDB-GENE-030131-611]
86. hsp90ab1 ENSDARG00000029150 162.82 1220.56 heat shock protein 90, alpha (cytosolic), class B member 1 [Source:ZFIN;Acc:ZDB-GENE-990415-95]
87. hspa8 ENSDARG00000068992, ENSDARG00000114726 162.82 1220.56 heat shock protein 8 [Source:ZFIN;Acc:ZDB-GENE-990415-92]
88. ppiab ENSDARG00000103994 162.82 1220.56 peptidylprolyl isomerase Ab (cyclophilin A) [Source:ZFIN;Acc:ZDB-GENE-030131-7459]
89. rpl18 ENSDARG00000029533 162.82 1220.56 ribosomal protein L18 [Source:ZFIN;Acc:ZDB-GENE-040801-165]
90. rpl18a ENSDARG00000025073 162.82 1220.56 ribosomal protein L18a [Source:ZFIN;Acc:ZDB-GENE-040426-1071]
91. rpl28 ENSDARG00000005791 162.82 1220.56 ribosomal protein L28 [Source:ZFIN;Acc:ZDB-GENE-040930-10]
92. actc1b ENSDARG00000099197 146.54 1098.52 actin, alpha, cardiac muscle 1b [Source:ZFIN;Acc:ZDB-GENE-000322-1]
93. aldob ENSDARG00000053684 146.54 1098.52 aldolase b, fructose-bisphosphate [Source:ZFIN;Acc:ZDB-GENE-030131-383]
94. atp2a1 ENSDARG00000020574 146.54 1098.52 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 1 [Source:ZFIN;Acc:ZDB-GENE-020905-1]
95. dap ENSDARG00000000069, ENSDARG00000114419 146.54 1098.52 death-associated protein [Source:ZFIN;Acc:ZDB-GENE-000511-3]
96. faua ENSDARG00000099022 146.54 1098.52 Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed a [Source:ZFIN;Acc:ZDB-GENE-040426-1700]
97. fkbp1aa ENSDARG00000022684 146.54 1098.52 FK506 binding protein 1Aa [Source:ZFIN;Acc:ZDB-GENE-030131-7275]
98. hmgn2 ENSDARG00000099572 146.54 1098.52 high mobility group nucleosomal binding domain 2 [Source:ZFIN;Acc:ZDB-GENE-051030-81]
99. icn ENSDARG00000009978 146.54 1098.52 ictacalcin [Source:ZFIN;Acc:ZDB-GENE-030131-8599]
100. id1 ENSDARG00000040764 146.54 1098.52 inhibitor of DNA binding 1 [Source:ZFIN;Acc:ZDB-GENE-990415-96]
First Previous 1 2 3 Next Last
Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA