Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Zebrafish_28hpf_trunk2, section s20.

Sample reads: 133,395. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. AC024175.4 AC024175.4 18281.41 137047.38
2. krt4 ENSDARG00000017624, ENSDARG00000115790 5552.33 41623.28 keratin 4 [Source:ZFIN;Acc:ZDB-GENE-000607-83]
3. apoeb ENSDARG00000040295 3368.68 25253.45 apolipoprotein Eb [Source:ZFIN;Acc:ZDB-GENE-980526-368]
4. zgc:161979 zgc:161979 2836.08 21260.80
5. apoc1l apoc1l 2809.45 21061.16
6. zgc:161979_1 zgc:161979_1 2796.14 20961.38
7. apoa1b ENSDARG00000101324 2689.62 20162.85 apolipoprotein A-Ib [Source:ZFIN;Acc:ZDB-GENE-050302-172]
8. apoa2 ENSDARG00000015866 2529.84 18965.05 apolipoprotein A-II [Source:ZFIN;Acc:ZDB-GENE-030131-1046]
9. apobb apobb 1810.83 13574.96
10. tmsb4x ENSDARG00000077777 1424.70 10680.32 thymosin beta 4 X-linked [Source:ZFIN;Acc:ZDB-GENE-030131-8304]
11. fabp2 ENSDARG00000006427, ENSDARG00000110230 1331.49 9981.57 fatty acid binding protein 2, intestinal [Source:ZFIN;Acc:ZDB-GENE-991019-5]
12. actb2 ENSDARG00000037870 1238.29 9282.89 actin, beta 2 [Source:ZFIN;Acc:ZDB-GENE-000329-3]
13. apoa1a ENSDARG00000012076, ENSDARG00000110395 1224.97 9183.04 apolipoprotein A-Ia [Source:ZFIN;Acc:ZDB-GENE-990415-14]
14. mt-nd2 ENSDARG00000063899 1185.03 8883.63 NADH dehydrogenase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-8]
15. ctsla ENSDARG00000007836 1171.71 8783.77 cathepsin La [Source:ZFIN;Acc:ZDB-GENE-030131-106]
16. mt-nd4 ENSDARG00000063917 985.31 7386.42 NADH dehydrogenase 4, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-10]
17. mt-co2 ENSDARG00000063908 945.36 7086.93 cytochrome c oxidase II, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-15]
18. apoa4 apoa4 905.42 6787.52
19. rbp4 ENSDARG00000101199 838.84 6288.40 retinol binding protein 4, plasma [Source:ZFIN;Acc:ZDB-GENE-000210-19]
20. si:dkey-150i13.2 ENSDARG00000071052 705.69 5290.24 si:dkey-150i13.2 [Source:ZFIN;Acc:ZDB-GENE-090312-157]
21. eef1a1l1 ENSDARG00000020850 679.06 5090.60 eukaryotic translation elongation factor 1 alpha 1, like 1 [Source:ZFIN;Acc:ZDB-GENE-990415-52]
22. actb1 ENSDARG00000037746, ENSDARG00000113649 652.43 4890.97 actin, beta 1 [Source:ZFIN;Acc:ZDB-GENE-000329-1]
23. fetub ENSDARG00000053973 625.80 4691.34 fetuin B [Source:ZFIN;Acc:ZDB-GENE-050208-4]
24. mt-nd1 ENSDARG00000063895 545.91 4092.44 NADH dehydrogenase 1, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-7]
25. mt-co3 ENSDARG00000063912 519.28 3892.80 cytochrome c oxidase III, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-16]
26. eef2b ENSDARG00000100371, ENSDARG00000109247 466.02 3493.54 eukaryotic translation elongation factor 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5128]
27. mt-atp6 ENSDARG00000063911 439.39 3293.91 ATP synthase 6, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-18]
28. rpl8 ENSDARG00000014867 426.08 3194.13 ribosomal protein L8 [Source:ZFIN;Acc:ZDB-GENE-040426-1670]
29. si:dkey-151g10.6 si:dkey-151g10.6 426.08 3194.13
30. bhmt ENSDARG00000013430 412.76 3094.27 betaine-homocysteine methyltransferase [Source:ZFIN;Acc:ZDB-GENE-030131-947]
31. zgc:153129 zgc:153129 412.76 3094.27
32. cyt1l ENSDARG00000036832 399.45 2994.49 type I cytokeratin, enveloping layer, like [Source:ZFIN;Acc:ZDB-GENE-061026-4]
33. mt-cyb ENSDARG00000063924 386.13 2894.64 cytochrome b, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-17]
34. zgc:92533 zgc:92533 372.82 2794.86
35. hspa8 ENSDARG00000068992, ENSDARG00000114726 359.50 2695.01 heat shock protein 8 [Source:ZFIN;Acc:ZDB-GENE-990415-92]
36. pla2g12b ENSDARG00000015662 359.50 2695.01 phospholipase A2, group XIIB [Source:ZFIN;Acc:ZDB-GENE-040426-2771]
37. rpl21 ENSDARG00000010516, ENSDARG00000110263 359.50 2695.01 ribosomal protein L21 [Source:ZFIN;Acc:ZDB-GENE-030131-8512]
38. rpl18a ENSDARG00000025073 346.19 2595.23 ribosomal protein L18a [Source:ZFIN;Acc:ZDB-GENE-040426-1071]
39. gatm ENSDARG00000036239 332.87 2495.37 glycine amidinotransferase (L-arginine:glycine amidinotransferase) [Source:ZFIN;Acc:ZDB-GENE-021015-1]
40. paics ENSDARG00000033539 332.87 2495.37 phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoimidazole succinocarboxamide synthetase [Source:ZFIN;Acc:ZDB-GENE-030131-9762]
41. sepp1a 319.56 2395.60 selenoprotein P, plasma, 1a
42. APOA4 APOA4 306.24 2295.74
43. icn ENSDARG00000009978 306.24 2295.74 ictacalcin [Source:ZFIN;Acc:ZDB-GENE-030131-8599]
44. rpl10a ENSDARG00000042905, ENSDARG00000115649 306.24 2295.74 ribosomal protein L10a [Source:ZFIN;Acc:ZDB-GENE-030131-2025]
45. cfl1l ENSDARG00000012972 292.93 2195.96 cofilin 1 (non-muscle), like [Source:ZFIN;Acc:ZDB-GENE-040426-2770]
46. gamt ENSDARG00000070844, ENSDARG00000109945 292.93 2195.96 guanidinoacetate N-methyltransferase [Source:ZFIN;Acc:ZDB-GENE-051030-97]
47. rpl7 ENSDARG00000007320 292.93 2195.96 ribosomal protein L7 [Source:ZFIN;Acc:ZDB-GENE-030131-8654]
48. si:dkey-33i11.4 ENSDARG00000099117 292.93 2195.96 si:dkey-33i11.4 [Source:ZFIN;Acc:ZDB-GENE-030131-33]
49. ssr2 ENSDARG00000005230 292.93 2195.96 signal sequence receptor, beta [Source:ZFIN;Acc:ZDB-GENE-010413-1]
50. mt2 ENSDARG00000041623, ENSDARG00000113583 279.61 2096.11 metallothionein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4174]
51. si:dkeyp-86f7.3 si:dkeyp-86f7.3 279.61 2096.11
52. COX5B_1 ENSDARG00000015978 266.30 1996.33 cytochrome c oxidase subunit 5B [Source:HGNC Symbol;Acc:HGNC:2269]
53. UBC ENSDARG00000102632 266.30 1996.33 ubiquitin C [Source:ZFIN;Acc:ZDB-GENE-061110-88]
54. ahcy ENSDARG00000005191 266.30 1996.33 adenosylhomocysteinase [Source:ZFIN;Acc:ZDB-GENE-031219-6]
55. hmga1a ENSDARG00000028335 266.30 1996.33 high mobility group AT-hook 1a [Source:ZFIN;Acc:ZDB-GENE-010502-1]
56. ptmab ENSDARG00000101766 266.30 1996.33 prothymosin alpha b [Source:ZFIN;Acc:ZDB-GENE-030131-8681]
57. aldob ENSDARG00000053684 252.98 1896.48 aldolase b, fructose-bisphosphate [Source:ZFIN;Acc:ZDB-GENE-030131-383]
58. zgc:112425 zgc:112425 252.98 1896.48
59. FP067396.1 FP067396.1 239.67 1796.70
60. apoc2 ENSDARG00000092155 239.67 1796.70 apolipoprotein C-II [Source:ZFIN;Acc:ZDB-GENE-030131-2168]
61. APOB APOB 226.35 1696.84
62. ctsba ENSDARG00000055120 226.35 1696.84 cathepsin Ba [Source:ZFIN;Acc:ZDB-GENE-040426-2650]
63. rps26l ENSDARG00000030408 226.35 1696.84 ribosomal protein S26, like [Source:ZFIN;Acc:ZDB-GENE-040426-1706]
64. slc43a2b ENSDARG00000061120, ENSDARG00000117188 226.35 1696.84 solute carrier family 43 (amino acid system L transporter), member 2b [Source:ZFIN;Acc:ZDB-GENE-041212-6]
65. tfa ENSDARG00000016771 226.35 1696.84 transferrin-a [Source:ZFIN;Acc:ZDB-GENE-980526-35]
66. RPL29 ENSDARG00000077717 213.04 1597.06 ribosomal protein L29 [Source:ZFIN;Acc:ZDB-GENE-040801-167]
67. atp6v1g1 ENSDARG00000022315, ENSDARG00000110951 213.04 1597.06 ATPase H+ transporting V1 subunit G1 [Source:ZFIN;Acc:ZDB-GENE-030131-6965]
68. hsp90ab1 ENSDARG00000029150 213.04 1597.06 heat shock protein 90, alpha (cytosolic), class B member 1 [Source:ZFIN;Acc:ZDB-GENE-990415-95]
69. npc2 ENSDARG00000090912 213.04 1597.06 Niemann-Pick disease, type C2 [Source:ZFIN;Acc:ZDB-GENE-021206-13]
70. prps1a ENSDARG00000015524 213.04 1597.06 phosphoribosyl pyrophosphate synthetase 1A [Source:ZFIN;Acc:ZDB-GENE-011212-5]
71. rpl19 ENSDARG00000013307 213.04 1597.06 ribosomal protein L19 [Source:ZFIN;Acc:ZDB-GENE-040426-2290]
72. aldh9a1a.1 ENSDARG00000069100, ENSDARG00000114905 199.72 1497.21 aldehyde dehydrogenase 9 family, member A1a, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-030131-1257]
73. pfn1 ENSDARG00000088091 199.72 1497.21 profilin 1 [Source:ZFIN;Acc:ZDB-GENE-031002-33]
74. pvalb9 ENSDARG00000071601, ENSDARG00000113946 199.72 1497.21 parvalbumin 9 [Source:ZFIN;Acc:ZDB-GENE-030805-4]
75. rpl26 ENSDARG00000102317 199.72 1497.21 ribosomal protein L26 [Source:ZFIN;Acc:ZDB-GENE-040426-2117]
76. rpl36a ENSDARG00000058105, ENSDARG00000112656 199.72 1497.21 ribosomal protein L36A [Source:ZFIN;Acc:ZDB-GENE-020423-1]
77. AC024175.17 AC024175.17 186.41 1397.43
78. ctsh ENSDARG00000041108 186.41 1397.43 cathepsin H [Source:ZFIN;Acc:ZDB-GENE-030131-3539]
79. h1f0 ENSDARG00000038559 186.41 1397.43 H1 histone family, member 0 [Source:ZFIN;Acc:ZDB-GENE-030131-337]
80. mat1a ENSDARG00000039605, ENSDARG00000115975 186.41 1397.43 methionine adenosyltransferase I, alpha [Source:ZFIN;Acc:ZDB-GENE-030131-6127]
81. mt-co1 ENSDARG00000063905 186.41 1397.43 cytochrome c oxidase I, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-14]
82. prdx5 ENSDARG00000055064 186.41 1397.43 peroxiredoxin 5 [Source:ZFIN;Acc:ZDB-GENE-050522-159]
83. myl6 ENSDARG00000008494, ENSDARG00000115496 173.09 1297.58 myosin, light chain 6, alkali, smooth muscle and non-muscle [Source:ZFIN;Acc:ZDB-GENE-041010-28]
84. rpl23 ENSDARG00000053457 173.09 1297.58 ribosomal protein L23 [Source:ZFIN;Acc:ZDB-GENE-030131-8756]
85. rpl36 ENSDARG00000100588 173.09 1297.58 ribosomal protein L36 [Source:ZFIN;Acc:ZDB-GENE-040622-2]
86. rpl9 ENSDARG00000037350, ENSDARG00000112384 173.09 1297.58 ribosomal protein L9 [Source:ZFIN;Acc:ZDB-GENE-030131-8646]
87. rps9 ENSDARG00000011405, ENSDARG00000113248 173.09 1297.58 ribosomal protein S9 [Source:ZFIN;Acc:ZDB-GENE-010724-15]
88. abca1b ENSDARG00000079009 159.78 1197.80 ATP-binding cassette, sub-family A (ABC1), member 1B [Source:ZFIN;Acc:ZDB-GENE-030131-9826]
89. actc1b ENSDARG00000099197 159.78 1197.80 actin, alpha, cardiac muscle 1b [Source:ZFIN;Acc:ZDB-GENE-000322-1]
90. btf3 ENSDARG00000035400, ENSDARG00000116462 159.78 1197.80 basic transcription factor 3 [Source:ZFIN;Acc:ZDB-GENE-030131-8731]
91. ctsll ENSDARG00000011701, ENSDARG00000112885 159.78 1197.80 cathepsin L, like [Source:ZFIN;Acc:ZDB-GENE-041010-76]
92. dbi ENSDARG00000026369 159.78 1197.80 diazepam binding inhibitor (GABA receptor modulator, acyl-CoA binding protein) [Source:ZFIN;Acc:ZDB-GENE-040426-1861]
93. glula ENSDARG00000099776 159.78 1197.80 glutamate-ammonia ligase (glutamine synthase) a [Source:ZFIN;Acc:ZDB-GENE-030131-688]
94. ldhba ENSDARG00000019644 159.78 1197.80 lactate dehydrogenase Ba [Source:ZFIN;Acc:ZDB-GENE-991026-6]
95. ppiaa ENSDARG00000009212 159.78 1197.80 peptidylprolyl isomerase Aa (cyclophilin A) [Source:ZFIN;Acc:ZDB-GENE-030131-8556]
96. rpl11 ENSDARG00000043509 159.78 1197.80 ribosomal protein L11 [Source:ZFIN;Acc:ZDB-GENE-040625-147]
97. rps23 ENSDARG00000021838 159.78 1197.80 ribosomal protein S23 [Source:ZFIN;Acc:ZDB-GENE-080220-50]
98. zgc:165571 zgc:165571 159.78 1197.80
99. f11r f11r 146.46 1097.94
100. fkbp1aa ENSDARG00000022684 146.46 1097.94 FK506 binding protein 1Aa [Source:ZFIN;Acc:ZDB-GENE-030131-7275]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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