Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Zebrafish_28hpf_trunk2, section s19.

Sample reads: 133,408. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. AC024175.4 AC024175.4 18176.35 136246.00
2. krt4 ENSDARG00000017624, ENSDARG00000115790 6651.40 49857.46 keratin 4 [Source:ZFIN;Acc:ZDB-GENE-000607-83]
3. apoeb ENSDARG00000040295 3002.10 22503.09 apolipoprotein Eb [Source:ZFIN;Acc:ZDB-GENE-980526-368]
4. apoc1l apoc1l 2963.11 22210.83
5. zgc:161979 zgc:161979 2791.56 20924.93
6. apoa1b ENSDARG00000101324 2495.25 18703.86 apolipoprotein A-Ib [Source:ZFIN;Acc:ZDB-GENE-050302-172]
7. apoa2 ENSDARG00000015866 2315.91 17359.56 apolipoprotein A-II [Source:ZFIN;Acc:ZDB-GENE-030131-1046]
8. apobb apobb 2175.55 16307.45
9. zgc:161979_1 zgc:161979_1 1887.03 14144.77
10. tmsb4x ENSDARG00000077777 1621.91 12157.49 thymosin beta 4 X-linked [Source:ZFIN;Acc:ZDB-GENE-030131-8304]
11. actb2 ENSDARG00000037870 1294.41 9702.62 actin, beta 2 [Source:ZFIN;Acc:ZDB-GENE-000329-3]
12. apoa1a ENSDARG00000012076, ENSDARG00000110395 1294.41 9702.62 apolipoprotein A-Ia [Source:ZFIN;Acc:ZDB-GENE-990415-14]
13. ctsla ENSDARG00000007836 1286.61 9644.15 cathepsin La [Source:ZFIN;Acc:ZDB-GENE-030131-106]
14. apoa4 apoa4 1185.24 8884.30
15. actb1 ENSDARG00000037746, ENSDARG00000113649 1052.68 7890.66 actin, beta 1 [Source:ZFIN;Acc:ZDB-GENE-000329-1]
16. fabp2 ENSDARG00000006427, ENSDARG00000110230 1037.09 7773.80 fatty acid binding protein 2, intestinal [Source:ZFIN;Acc:ZDB-GENE-991019-5]
17. mt-nd2 ENSDARG00000063899 951.31 7130.81 NADH dehydrogenase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-8]
18. mt-nd4 ENSDARG00000063917 732.98 5494.26 NADH dehydrogenase 4, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-10]
19. rbp4 ENSDARG00000101199 693.99 5202.00 retinol binding protein 4, plasma [Source:ZFIN;Acc:ZDB-GENE-000210-19]
20. si:dkey-150i13.2 ENSDARG00000071052 655.00 4909.74 si:dkey-150i13.2 [Source:ZFIN;Acc:ZDB-GENE-090312-157]
21. eef1a1l1 ENSDARG00000020850 584.82 4383.68 eukaryotic translation elongation factor 1 alpha 1, like 1 [Source:ZFIN;Acc:ZDB-GENE-990415-52]
22. mt-co3 ENSDARG00000063912 569.23 4266.83 cytochrome c oxidase III, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-16]
23. fetub ENSDARG00000053973 553.63 4149.89 fetuin B [Source:ZFIN;Acc:ZDB-GENE-050208-4]
24. mt-co2 ENSDARG00000063908 545.84 4091.50 cytochrome c oxidase II, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-15]
25. bhmt ENSDARG00000013430 530.24 3974.56 betaine-homocysteine methyltransferase [Source:ZFIN;Acc:ZDB-GENE-030131-947]
26. zgc:153129 zgc:153129 514.65 3857.71
27. mt-atp6 ENSDARG00000063911 413.28 3097.86 ATP synthase 6, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-18]
28. cfl1l ENSDARG00000012972 382.09 2864.06 cofilin 1 (non-muscle), like [Source:ZFIN;Acc:ZDB-GENE-040426-2770]
29. cyt1l ENSDARG00000036832 382.09 2864.06 type I cytokeratin, enveloping layer, like [Source:ZFIN;Acc:ZDB-GENE-061026-4]
30. atp6v1g1 ENSDARG00000022315, ENSDARG00000110951 374.29 2805.60 ATPase H+ transporting V1 subunit G1 [Source:ZFIN;Acc:ZDB-GENE-030131-6965]
31. mt-nd1 ENSDARG00000063895 374.29 2805.60 NADH dehydrogenase 1, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-7]
32. sepp1a 374.29 2805.60 selenoprotein P, plasma, 1a
33. ptmab ENSDARG00000101766 366.49 2747.13 prothymosin alpha b [Source:ZFIN;Acc:ZDB-GENE-030131-8681]
34. hspa8 ENSDARG00000068992, ENSDARG00000114726 350.89 2630.20 heat shock protein 8 [Source:ZFIN;Acc:ZDB-GENE-990415-92]
35. dbi ENSDARG00000026369 343.10 2571.80 diazepam binding inhibitor (GABA receptor modulator, acyl-CoA binding protein) [Source:ZFIN;Acc:ZDB-GENE-040426-1861]
36. zgc:92533 zgc:92533 327.50 2454.87
37. gatm ENSDARG00000036239 319.70 2396.40 glycine amidinotransferase (L-arginine:glycine amidinotransferase) [Source:ZFIN;Acc:ZDB-GENE-021015-1]
38. si:dkey-151g10.6 si:dkey-151g10.6 319.70 2396.40
39. mt2 ENSDARG00000041623, ENSDARG00000113583 311.91 2338.01 metallothionein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4174]
40. slc43a2b ENSDARG00000061120, ENSDARG00000117188 311.91 2338.01 solute carrier family 43 (amino acid system L transporter), member 2b [Source:ZFIN;Acc:ZDB-GENE-041212-6]
41. hmga1a ENSDARG00000028335 304.11 2279.54 high mobility group AT-hook 1a [Source:ZFIN;Acc:ZDB-GENE-010502-1]
42. npc2 ENSDARG00000090912 288.51 2162.61 Niemann-Pick disease, type C2 [Source:ZFIN;Acc:ZDB-GENE-021206-13]
43. UBC ENSDARG00000102632 272.92 2045.75 ubiquitin C [Source:ZFIN;Acc:ZDB-GENE-061110-88]
44. zgc:165571 zgc:165571 272.92 2045.75
45. APOB APOB 265.12 1987.28
46. krt5 ENSDARG00000058371, ENSDARG00000112017 257.32 1928.82 keratin 5 [Source:ZFIN;Acc:ZDB-GENE-991110-23]
47. ctsd ENSDARG00000057698, ENSDARG00000110172, ENSDARG00000113876 249.53 1870.42 cathepsin D [Source:ZFIN;Acc:ZDB-GENE-010131-8]
48. eef2b ENSDARG00000100371, ENSDARG00000109247 249.53 1870.42 eukaryotic translation elongation factor 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5128]
49. ssr2 ENSDARG00000005230 249.53 1870.42 signal sequence receptor, beta [Source:ZFIN;Acc:ZDB-GENE-010413-1]
50. APOA4 APOA4 233.93 1753.49
51. pabpc1a ENSDARG00000017219 233.93 1753.49 poly(A) binding protein, cytoplasmic 1a [Source:ZFIN;Acc:ZDB-GENE-030131-3238]
52. rps27a ENSDARG00000032725, ENSDARG00000114059 233.93 1753.49 ribosomal protein S27a [Source:ZFIN;Acc:ZDB-GENE-030131-10018]
53. zgc:112425 zgc:112425 233.93 1753.49
54. mt-cyb ENSDARG00000063924 226.13 1695.02 cytochrome b, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-17]
55. pfn1 ENSDARG00000088091 226.13 1695.02 profilin 1 [Source:ZFIN;Acc:ZDB-GENE-031002-33]
56. ppiaa ENSDARG00000009212 226.13 1695.02 peptidylprolyl isomerase Aa (cyclophilin A) [Source:ZFIN;Acc:ZDB-GENE-030131-8556]
57. apoc2 ENSDARG00000092155 218.33 1636.55 apolipoprotein C-II [Source:ZFIN;Acc:ZDB-GENE-030131-2168]
58. ctsba ENSDARG00000055120 218.33 1636.55 cathepsin Ba [Source:ZFIN;Acc:ZDB-GENE-040426-2650]
59. abca1b ENSDARG00000079009 210.54 1578.16 ATP-binding cassette, sub-family A (ABC1), member 1B [Source:ZFIN;Acc:ZDB-GENE-030131-9826]
60. ctsll ENSDARG00000011701, ENSDARG00000112885 202.74 1519.70 cathepsin L, like [Source:ZFIN;Acc:ZDB-GENE-041010-76]
61. h1f0 ENSDARG00000038559 202.74 1519.70 H1 histone family, member 0 [Source:ZFIN;Acc:ZDB-GENE-030131-337]
62. krt8 ENSDARG00000058358, ENSDARG00000109279 202.74 1519.70 keratin 8 [Source:ZFIN;Acc:ZDB-GENE-030411-5]
63. psap ENSDARG00000013968 202.74 1519.70 prosaposin [Source:ZFIN;Acc:ZDB-GENE-020108-1]
64. rpl36a ENSDARG00000058105, ENSDARG00000112656 202.74 1519.70 ribosomal protein L36A [Source:ZFIN;Acc:ZDB-GENE-020423-1]
65. rps2 ENSDARG00000077291 202.74 1519.70 ribosomal protein S2 [Source:ZFIN;Acc:ZDB-GENE-040426-2454]
66. rps23 ENSDARG00000021838 202.74 1519.70 ribosomal protein S23 [Source:ZFIN;Acc:ZDB-GENE-080220-50]
67. tfa ENSDARG00000016771 202.74 1519.70 transferrin-a [Source:ZFIN;Acc:ZDB-GENE-980526-35]
68. hsp90ab1 ENSDARG00000029150 194.94 1461.23 heat shock protein 90, alpha (cytosolic), class B member 1 [Source:ZFIN;Acc:ZDB-GENE-990415-95]
69. RPL29 ENSDARG00000077717 187.14 1402.76 ribosomal protein L29 [Source:ZFIN;Acc:ZDB-GENE-040801-167]
70. aldob ENSDARG00000053684 187.14 1402.76 aldolase b, fructose-bisphosphate [Source:ZFIN;Acc:ZDB-GENE-030131-383]
71. icn ENSDARG00000009978 187.14 1402.76 ictacalcin [Source:ZFIN;Acc:ZDB-GENE-030131-8599]
72. ldhba ENSDARG00000019644 187.14 1402.76 lactate dehydrogenase Ba [Source:ZFIN;Acc:ZDB-GENE-991026-6]
73. pvalb9 ENSDARG00000071601, ENSDARG00000113946 187.14 1402.76 parvalbumin 9 [Source:ZFIN;Acc:ZDB-GENE-030805-4]
74. rpl9 ENSDARG00000037350, ENSDARG00000112384 187.14 1402.76 ribosomal protein L9 [Source:ZFIN;Acc:ZDB-GENE-030131-8646]
75. aldh9a1a.1 ENSDARG00000069100, ENSDARG00000114905 179.35 1344.37 aldehyde dehydrogenase 9 family, member A1a, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-030131-1257]
76. paics ENSDARG00000033539 179.35 1344.37 phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoimidazole succinocarboxamide synthetase [Source:ZFIN;Acc:ZDB-GENE-030131-9762]
77. gamt ENSDARG00000070844, ENSDARG00000109945 171.55 1285.90 guanidinoacetate N-methyltransferase [Source:ZFIN;Acc:ZDB-GENE-051030-97]
78. rpl11 ENSDARG00000043509 171.55 1285.90 ribosomal protein L11 [Source:ZFIN;Acc:ZDB-GENE-040625-147]
79. si:dkeyp-86f7.3 si:dkeyp-86f7.3 171.55 1285.90
80. zgc:136410 ENSDARG00000102241 171.55 1285.90 zgc:136410 [Source:ZFIN;Acc:ZDB-GENE-060421-6071]
81. aldoaa ENSDARG00000011665 163.75 1227.43 aldolase a, fructose-bisphosphate, a [Source:ZFIN;Acc:ZDB-GENE-030131-8369]
82. cst3 ENSDARG00000007795 163.75 1227.43 cystatin C (amyloid angiopathy and cerebral hemorrhage) [Source:ZFIN;Acc:ZDB-GENE-030131-373]
83. mat1a ENSDARG00000039605, ENSDARG00000115975 163.75 1227.43 methionine adenosyltransferase I, alpha [Source:ZFIN;Acc:ZDB-GENE-030131-6127]
84. prdx5 ENSDARG00000055064 163.75 1227.43 peroxiredoxin 5 [Source:ZFIN;Acc:ZDB-GENE-050522-159]
85. prps1a ENSDARG00000015524 163.75 1227.43 phosphoribosyl pyrophosphate synthetase 1A [Source:ZFIN;Acc:ZDB-GENE-011212-5]
86. rpl27 ENSDARG00000015128 163.75 1227.43 ribosomal protein L27 [Source:ZFIN;Acc:ZDB-GENE-030131-4343]
87. rpl7 ENSDARG00000007320 163.75 1227.43 ribosomal protein L7 [Source:ZFIN;Acc:ZDB-GENE-030131-8654]
88. rpl8 ENSDARG00000014867 163.75 1227.43 ribosomal protein L8 [Source:ZFIN;Acc:ZDB-GENE-040426-1670]
89. rps9 ENSDARG00000011405, ENSDARG00000113248 163.75 1227.43 ribosomal protein S9 [Source:ZFIN;Acc:ZDB-GENE-010724-15]
90. atp6v0ca ENSDARG00000057853 155.95 1168.97 ATPase H+ transporting V0 subunit ca [Source:ZFIN;Acc:ZDB-GENE-020419-23]
91. btf3 ENSDARG00000035400, ENSDARG00000116462 155.95 1168.97 basic transcription factor 3 [Source:ZFIN;Acc:ZDB-GENE-030131-8731]
92. fgg ENSDARG00000037281, ENSDARG00000114705 155.95 1168.97 fibrinogen gamma chain [Source:ZFIN;Acc:ZDB-GENE-040426-1998]
93. glula ENSDARG00000099776 155.95 1168.97 glutamate-ammonia ligase (glutamine synthase) a [Source:ZFIN;Acc:ZDB-GENE-030131-688]
94. hspe1 ENSDARG00000056167 155.95 1168.97 heat shock 10 protein 1 [Source:ZFIN;Acc:ZDB-GENE-000906-2]
95. rpl26 ENSDARG00000102317 155.95 1168.97 ribosomal protein L26 [Source:ZFIN;Acc:ZDB-GENE-040426-2117]
96. zgc:193505 ENSDARG00000093584, ENSDARG00000109499 155.95 1168.97 zgc:193505 [Source:ZFIN;Acc:ZDB-GENE-030131-7103]
97. cd63 ENSDARG00000025147, ENSDARG00000115979 148.16 1110.58 CD63 molecule [Source:ZFIN;Acc:ZDB-GENE-030131-180]
98. faua ENSDARG00000099022 148.16 1110.58 Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed a [Source:ZFIN;Acc:ZDB-GENE-040426-1700]
99. mthfd1l ENSDARG00000042221, ENSDARG00000110473 148.16 1110.58 methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1 like [Source:ZFIN;Acc:ZDB-GENE-041001-133]
100. myl6 ENSDARG00000008494, ENSDARG00000115496 148.16 1110.58 myosin, light chain 6, alkali, smooth muscle and non-muscle [Source:ZFIN;Acc:ZDB-GENE-041010-28]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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