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Experiment Zebrafish_28hpf_trunk2, section s18.

Sample reads: 133,399. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. AC024175.4 AC024175.4 24642.51 184728.21
2. krt4 ENSDARG00000017624, ENSDARG00000115790 5907.80 44286.78 keratin 4 [Source:ZFIN;Acc:ZDB-GENE-000607-83]
3. apoc1l apoc1l 3558.76 26677.61
4. apoeb ENSDARG00000040295 2496.25 18712.70 apolipoprotein Eb [Source:ZFIN;Acc:ZDB-GENE-980526-368]
5. zgc:161979_1 zgc:161979_1 2323.44 17417.26
6. apoa2 ENSDARG00000015866 2125.02 15929.84 apolipoprotein A-II [Source:ZFIN;Acc:ZDB-GENE-030131-1046]
7. zgc:161979 zgc:161979 1977.80 14826.23
8. tmsb4x ENSDARG00000077777 1907.39 14298.41 thymosin beta 4 X-linked [Source:ZFIN;Acc:ZDB-GENE-030131-8304]
9. apoa1b ENSDARG00000101324 1849.79 13866.62 apolipoprotein A-Ib [Source:ZFIN;Acc:ZDB-GENE-050302-172]
10. apobb apobb 1625.77 12187.30
11. actb2 ENSDARG00000037870 1420.94 10651.82 actin, beta 2 [Source:ZFIN;Acc:ZDB-GENE-000329-3]
12. fabp2 ENSDARG00000006427, ENSDARG00000110230 1177.72 8828.57 fatty acid binding protein 2, intestinal [Source:ZFIN;Acc:ZDB-GENE-991019-5]
13. apoa1a ENSDARG00000012076, ENSDARG00000110395 1171.32 8780.59 apolipoprotein A-Ia [Source:ZFIN;Acc:ZDB-GENE-990415-14]
14. ctsla ENSDARG00000007836 1164.92 8732.62 cathepsin La [Source:ZFIN;Acc:ZDB-GENE-030131-106]
15. apoa4 apoa4 1120.11 8396.71
16. actb1 ENSDARG00000037746, ENSDARG00000113649 998.50 7485.08 actin, beta 1 [Source:ZFIN;Acc:ZDB-GENE-000329-1]
17. zgc:153129 zgc:153129 723.27 5421.87
18. mt-nd2 ENSDARG00000063899 691.27 5181.98 NADH dehydrogenase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-8]
19. eef1a1l1 ENSDARG00000020850 646.47 4846.15 eukaryotic translation elongation factor 1 alpha 1, like 1 [Source:ZFIN;Acc:ZDB-GENE-990415-52]
20. mt-co2 ENSDARG00000063908 595.26 4462.26 cytochrome c oxidase II, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-15]
21. si:dkey-150i13.2 ENSDARG00000071052 569.66 4270.36 si:dkey-150i13.2 [Source:ZFIN;Acc:ZDB-GENE-090312-157]
22. mt-nd4 ENSDARG00000063917 505.65 3790.52 NADH dehydrogenase 4, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-10]
23. mt-atp6 ENSDARG00000063911 435.24 3262.70 ATP synthase 6, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-18]
24. bhmt ENSDARG00000013430 422.44 3166.75 betaine-homocysteine methyltransferase [Source:ZFIN;Acc:ZDB-GENE-030131-947]
25. cfl1l ENSDARG00000012972 422.44 3166.75 cofilin 1 (non-muscle), like [Source:ZFIN;Acc:ZDB-GENE-040426-2770]
26. si:dkey-151g10.6 si:dkey-151g10.6 403.24 3022.82
27. rbp4 ENSDARG00000101199 396.84 2974.84 retinol binding protein 4, plasma [Source:ZFIN;Acc:ZDB-GENE-000210-19]
28. hmga1a ENSDARG00000028335 390.44 2926.86 high mobility group AT-hook 1a [Source:ZFIN;Acc:ZDB-GENE-010502-1]
29. fetub ENSDARG00000053973 377.64 2830.91 fetuin B [Source:ZFIN;Acc:ZDB-GENE-050208-4]
30. mt2 ENSDARG00000041623, ENSDARG00000113583 371.24 2782.93 metallothionein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4174]
31. mt-co3 ENSDARG00000063912 326.43 2447.02 cytochrome c oxidase III, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-16]
32. zgc:92533 zgc:92533 320.03 2399.05
33. UBC ENSDARG00000102632 313.63 2351.07 ubiquitin C [Source:ZFIN;Acc:ZDB-GENE-061110-88]
34. ptmab ENSDARG00000101766 313.63 2351.07 prothymosin alpha b [Source:ZFIN;Acc:ZDB-GENE-030131-8681]
35. atp6v1g1 ENSDARG00000022315, ENSDARG00000110951 307.23 2303.10 ATPase H+ transporting V1 subunit G1 [Source:ZFIN;Acc:ZDB-GENE-030131-6965]
36. mt-nd1 ENSDARG00000063895 288.03 2159.17 NADH dehydrogenase 1, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-7]
37. gatm ENSDARG00000036239 268.83 2015.24 glycine amidinotransferase (L-arginine:glycine amidinotransferase) [Source:ZFIN;Acc:ZDB-GENE-021015-1]
38. hspa8 ENSDARG00000068992, ENSDARG00000114726 268.83 2015.24 heat shock protein 8 [Source:ZFIN;Acc:ZDB-GENE-990415-92]
39. APOA4 APOA4 262.43 1967.26
40. npc2 ENSDARG00000090912 262.43 1967.26 Niemann-Pick disease, type C2 [Source:ZFIN;Acc:ZDB-GENE-021206-13]
41. pabpc1a ENSDARG00000017219 249.63 1871.31 poly(A) binding protein, cytoplasmic 1a [Source:ZFIN;Acc:ZDB-GENE-030131-3238]
42. btf3 ENSDARG00000035400, ENSDARG00000116462 243.22 1823.26 basic transcription factor 3 [Source:ZFIN;Acc:ZDB-GENE-030131-8731]
43. cst3 ENSDARG00000007795 243.22 1823.26 cystatin C (amyloid angiopathy and cerebral hemorrhage) [Source:ZFIN;Acc:ZDB-GENE-030131-373]
44. paics ENSDARG00000033539 243.22 1823.26 phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoimidazole succinocarboxamide synthetase [Source:ZFIN;Acc:ZDB-GENE-030131-9762]
45. rpl10a ENSDARG00000042905, ENSDARG00000115649 243.22 1823.26 ribosomal protein L10a [Source:ZFIN;Acc:ZDB-GENE-030131-2025]
46. rps14 ENSDARG00000036629 243.22 1823.26 ribosomal protein S14 [Source:ZFIN;Acc:ZDB-GENE-030131-8631]
47. cyt1l ENSDARG00000036832 236.82 1775.28 type I cytokeratin, enveloping layer, like [Source:ZFIN;Acc:ZDB-GENE-061026-4]
48. eef2b ENSDARG00000100371, ENSDARG00000109247 236.82 1775.28 eukaryotic translation elongation factor 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5128]
49. mt-cyb ENSDARG00000063924 236.82 1775.28 cytochrome b, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-17]
50. sepp1a 230.42 1727.30 selenoprotein P, plasma, 1a
51. aldob ENSDARG00000053684 224.02 1679.33 aldolase b, fructose-bisphosphate [Source:ZFIN;Acc:ZDB-GENE-030131-383]
52. zgc:112425 zgc:112425 224.02 1679.33
53. apoc2 ENSDARG00000092155 217.62 1631.35 apolipoprotein C-II [Source:ZFIN;Acc:ZDB-GENE-030131-2168]
54. ctsll ENSDARG00000011701, ENSDARG00000112885 217.62 1631.35 cathepsin L, like [Source:ZFIN;Acc:ZDB-GENE-041010-76]
55. pfn1 ENSDARG00000088091 217.62 1631.35 profilin 1 [Source:ZFIN;Acc:ZDB-GENE-031002-33]
56. ssr2 ENSDARG00000005230 217.62 1631.35 signal sequence receptor, beta [Source:ZFIN;Acc:ZDB-GENE-010413-1]
57. ctsba ENSDARG00000055120 211.22 1583.37 cathepsin Ba [Source:ZFIN;Acc:ZDB-GENE-040426-2650]
58. pvalb9 ENSDARG00000071601, ENSDARG00000113946 211.22 1583.37 parvalbumin 9 [Source:ZFIN;Acc:ZDB-GENE-030805-4]
59. myl12.1 ENSDARG00000099766 204.82 1535.40 myosin, light chain 12, genome duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4918]
60. tfa ENSDARG00000016771 204.82 1535.40 transferrin-a [Source:ZFIN;Acc:ZDB-GENE-980526-35]
61. si:dkeyp-86f7.3 si:dkeyp-86f7.3 198.42 1487.42
62. prdx5 ENSDARG00000055064 192.02 1439.44 peroxiredoxin 5 [Source:ZFIN;Acc:ZDB-GENE-050522-159]
63. rnaseka ENSDARG00000069461 185.62 1391.47 ribonuclease, RNase K a [Source:ZFIN;Acc:ZDB-GENE-060825-301]
64. icn ENSDARG00000009978 179.22 1343.49 ictacalcin [Source:ZFIN;Acc:ZDB-GENE-030131-8599]
65. rpl21 ENSDARG00000010516, ENSDARG00000110263 179.22 1343.49 ribosomal protein L21 [Source:ZFIN;Acc:ZDB-GENE-030131-8512]
66. APOB APOB 172.82 1295.51
67. dbi ENSDARG00000026369 172.82 1295.51 diazepam binding inhibitor (GABA receptor modulator, acyl-CoA binding protein) [Source:ZFIN;Acc:ZDB-GENE-040426-1861]
68. prps1a ENSDARG00000015524 172.82 1295.51 phosphoribosyl pyrophosphate synthetase 1A [Source:ZFIN;Acc:ZDB-GENE-011212-5]
69. mt-co1 ENSDARG00000063905 166.42 1247.54 cytochrome c oxidase I, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-14]
70. pla2g12b ENSDARG00000015662 166.42 1247.54 phospholipase A2, group XIIB [Source:ZFIN;Acc:ZDB-GENE-040426-2771]
71. ppiaa ENSDARG00000009212 166.42 1247.54 peptidylprolyl isomerase Aa (cyclophilin A) [Source:ZFIN;Acc:ZDB-GENE-030131-8556]
72. rpl26 ENSDARG00000102317 166.42 1247.54 ribosomal protein L26 [Source:ZFIN;Acc:ZDB-GENE-040426-2117]
73. rps19 ENSDARG00000030602 166.42 1247.54 ribosomal protein S19 [Source:ZFIN;Acc:ZDB-GENE-040426-1716]
74. ckmt1 ENSDARG00000016598, ENSDARG00000113143 160.02 1199.56 creatine kinase, mitochondrial 1 [Source:ZFIN;Acc:ZDB-GENE-030131-611]
75. h1f0 ENSDARG00000038559 160.02 1199.56 H1 histone family, member 0 [Source:ZFIN;Acc:ZDB-GENE-030131-337]
76. hsp90ab1 ENSDARG00000029150 160.02 1199.56 heat shock protein 90, alpha (cytosolic), class B member 1 [Source:ZFIN;Acc:ZDB-GENE-990415-95]
77. rpl8 ENSDARG00000014867 160.02 1199.56 ribosomal protein L8 [Source:ZFIN;Acc:ZDB-GENE-040426-1670]
78. rps12 ENSDARG00000036875, ENSDARG00000115157 160.02 1199.56 ribosomal protein S12 [Source:ZFIN;Acc:ZDB-GENE-030131-8951]
79. rps26l ENSDARG00000030408 160.02 1199.56 ribosomal protein S26, like [Source:ZFIN;Acc:ZDB-GENE-040426-1706]
80. rps5 ENSDARG00000043453 160.02 1199.56 ribosomal protein S5 [Source:ZFIN;Acc:ZDB-GENE-020419-12]
81. zgc:136410 ENSDARG00000102241 160.02 1199.56 zgc:136410 [Source:ZFIN;Acc:ZDB-GENE-060421-6071]
82. CU914813.1 CU914813.1 153.62 1151.59
83. atp6v0ca ENSDARG00000057853 153.62 1151.59 ATPase H+ transporting V0 subunit ca [Source:ZFIN;Acc:ZDB-GENE-020419-23]
84. eif5a ENSDARG00000017235 153.62 1151.59 eukaryotic translation initiation factor 5A [Source:ZFIN;Acc:ZDB-GENE-040426-2229]
85. glula ENSDARG00000099776 153.62 1151.59 glutamate-ammonia ligase (glutamine synthase) a [Source:ZFIN;Acc:ZDB-GENE-030131-688]
86. rpl36 ENSDARG00000100588 153.62 1151.59 ribosomal protein L36 [Source:ZFIN;Acc:ZDB-GENE-040622-2]
87. rpl36a ENSDARG00000058105, ENSDARG00000112656 153.62 1151.59 ribosomal protein L36A [Source:ZFIN;Acc:ZDB-GENE-020423-1]
88. slc43a2b ENSDARG00000061120, ENSDARG00000117188 153.62 1151.59 solute carrier family 43 (amino acid system L transporter), member 2b [Source:ZFIN;Acc:ZDB-GENE-041212-6]
89. aldh9a1a.1 ENSDARG00000069100, ENSDARG00000114905 147.21 1103.53 aldehyde dehydrogenase 9 family, member A1a, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-030131-1257]
90. aldoaa ENSDARG00000011665 147.21 1103.53 aldolase a, fructose-bisphosphate, a [Source:ZFIN;Acc:ZDB-GENE-030131-8369]
91. capns1b ENSDARG00000013804 147.21 1103.53 calpain, small subunit 1 b [Source:ZFIN;Acc:ZDB-GENE-030131-5206]
92. gamt ENSDARG00000070844, ENSDARG00000109945 147.21 1103.53 guanidinoacetate N-methyltransferase [Source:ZFIN;Acc:ZDB-GENE-051030-97]
93. ldhba ENSDARG00000019644 147.21 1103.53 lactate dehydrogenase Ba [Source:ZFIN;Acc:ZDB-GENE-991026-6]
94. mat1a ENSDARG00000039605, ENSDARG00000115975 147.21 1103.53 methionine adenosyltransferase I, alpha [Source:ZFIN;Acc:ZDB-GENE-030131-6127]
95. cebpb ENSDARG00000042725 140.81 1055.56 CCAAT enhancer binding protein beta [Source:ZFIN;Acc:ZDB-GENE-020111-3]
96. rps15 ENSDARG00000070849, ENSDARG00000110979 140.81 1055.56 ribosomal protein S15 [Source:ZFIN;Acc:ZDB-GENE-030131-9092]
97. rps2 ENSDARG00000077291 140.81 1055.56 ribosomal protein S2 [Source:ZFIN;Acc:ZDB-GENE-040426-2454]
98. serp1 ENSDARG00000099439 140.81 1055.56 stress-associated endoplasmic reticulum protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8741]
99. cd164 ENSDARG00000013628 134.41 1007.58 CD164 molecule, sialomucin [Source:ZFIN;Acc:ZDB-GENE-030131-1598]
100. col1a1a ENSDARG00000012405, ENSDARG00000116113 134.41 1007.58 collagen, type I, alpha 1a [Source:ZFIN;Acc:ZDB-GENE-030131-9102]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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