Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Zebrafish_28hpf_trunk2, section s17.

Sample reads: 133,394. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. AC024175.4 AC024175.4 26476.88 198486.71
2. krt4 ENSDARG00000017624, ENSDARG00000115790 4852.32 36375.93 keratin 4 [Source:ZFIN;Acc:ZDB-GENE-000607-83]
3. apoc1l apoc1l 2867.28 21494.86
4. apoeb ENSDARG00000040295 2496.45 18714.90 apolipoprotein Eb [Source:ZFIN;Acc:ZDB-GENE-980526-368]
5. apoa2 ENSDARG00000015866 2474.63 18551.32 apolipoprotein A-II [Source:ZFIN;Acc:ZDB-GENE-030131-1046]
6. zgc:161979 zgc:161979 2426.16 18187.96
7. apoa1b ENSDARG00000101324 2006.85 15044.56 apolipoprotein A-Ib [Source:ZFIN;Acc:ZDB-GENE-050302-172]
8. zgc:161979_1 zgc:161979_1 1757.21 13173.11
9. apobb apobb 1660.26 12446.31
10. tmsb4x ENSDARG00000077777 1495.44 11210.72 thymosin beta 4 X-linked [Source:ZFIN;Acc:ZDB-GENE-030131-8304]
11. actb2 ENSDARG00000037870 1071.29 8031.04 actin, beta 2 [Source:ZFIN;Acc:ZDB-GENE-000329-3]
12. apoa1a ENSDARG00000012076, ENSDARG00000110395 1059.17 7940.18 apolipoprotein A-Ia [Source:ZFIN;Acc:ZDB-GENE-990415-14]
13. actb1 ENSDARG00000037746, ENSDARG00000113649 891.93 6686.45 actin, beta 1 [Source:ZFIN;Acc:ZDB-GENE-000329-1]
14. apoa4 apoa4 809.53 6068.73
15. ctsla ENSDARG00000007836 787.71 5905.15 cathepsin La [Source:ZFIN;Acc:ZDB-GENE-030131-106]
16. fabp2 ENSDARG00000006427, ENSDARG00000110230 756.21 5669.01 fatty acid binding protein 2, intestinal [Source:ZFIN;Acc:ZDB-GENE-991019-5]
17. eef1a1l1 ENSDARG00000020850 632.59 4742.28 eukaryotic translation elongation factor 1 alpha 1, like 1 [Source:ZFIN;Acc:ZDB-GENE-990415-52]
18. mt-nd4 ENSDARG00000063917 613.20 4596.92 NADH dehydrogenase 4, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-10]
19. zgc:153129 zgc:153129 603.51 4524.28
20. bhmt ENSDARG00000013430 574.43 4306.27 betaine-homocysteine methyltransferase [Source:ZFIN;Acc:ZDB-GENE-030131-947]
21. mt-co2 ENSDARG00000063908 574.43 4306.27 cytochrome c oxidase II, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-15]
22. mt-nd2 ENSDARG00000063899 547.76 4106.34 NADH dehydrogenase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-8]
23. si:dkey-150i13.2 ENSDARG00000071052 545.34 4088.20 si:dkey-150i13.2 [Source:ZFIN;Acc:ZDB-GENE-090312-157]
24. fetub ENSDARG00000053973 499.29 3742.98 fetuin B [Source:ZFIN;Acc:ZDB-GENE-050208-4]
25. mt-co3 ENSDARG00000063912 482.32 3615.76 cytochrome c oxidase III, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-16]
26. si:dkey-151g10.6 si:dkey-151g10.6 397.49 2979.83
27. rbp4 ENSDARG00000101199 392.65 2943.54 retinol binding protein 4, plasma [Source:ZFIN;Acc:ZDB-GENE-000210-19]
28. mt-atp6 ENSDARG00000063911 387.80 2907.18 ATP synthase 6, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-18]
29. cfl1l ENSDARG00000012972 358.71 2689.11 cofilin 1 (non-muscle), like [Source:ZFIN;Acc:ZDB-GENE-040426-2770]
30. mt-nd1 ENSDARG00000063895 349.02 2616.47 NADH dehydrogenase 1, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-7]
31. hmga1a ENSDARG00000028335 339.32 2543.75 high mobility group AT-hook 1a [Source:ZFIN;Acc:ZDB-GENE-010502-1]
32. mt-cyb ENSDARG00000063924 324.78 2434.75 cytochrome b, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-17]
33. eef2b ENSDARG00000100371, ENSDARG00000109247 307.81 2307.53 eukaryotic translation elongation factor 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5128]
34. mt2 ENSDARG00000041623, ENSDARG00000113583 286.00 2144.03 metallothionein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4174]
35. gatm ENSDARG00000036239 283.58 2125.89 glycine amidinotransferase (L-arginine:glycine amidinotransferase) [Source:ZFIN;Acc:ZDB-GENE-021015-1]
36. sepp1a 271.46 2035.03 selenoprotein P, plasma, 1a
37. APOB APOB 261.76 1962.31
38. APOA4 APOA4 239.95 1798.81
39. zgc:92533 zgc:92533 232.68 1744.31
40. zgc:112425 zgc:112425 230.25 1726.09
41. UBC ENSDARG00000102632 227.83 1707.95 ubiquitin C [Source:ZFIN;Acc:ZDB-GENE-061110-88]
42. col1a1a ENSDARG00000012405, ENSDARG00000116113 222.98 1671.59 collagen, type I, alpha 1a [Source:ZFIN;Acc:ZDB-GENE-030131-9102]
43. rpl10a ENSDARG00000042905, ENSDARG00000115649 222.98 1671.59 ribosomal protein L10a [Source:ZFIN;Acc:ZDB-GENE-030131-2025]
44. ppiaa ENSDARG00000009212 218.14 1635.31 peptidylprolyl isomerase Aa (cyclophilin A) [Source:ZFIN;Acc:ZDB-GENE-030131-8556]
45. tfa ENSDARG00000016771 215.71 1617.09 transferrin-a [Source:ZFIN;Acc:ZDB-GENE-980526-35]
46. dbi ENSDARG00000026369 213.29 1598.95 diazepam binding inhibitor (GABA receptor modulator, acyl-CoA binding protein) [Source:ZFIN;Acc:ZDB-GENE-040426-1861]
47. pla2g12b ENSDARG00000015662 213.29 1598.95 phospholipase A2, group XIIB [Source:ZFIN;Acc:ZDB-GENE-040426-2771]
48. atp6v1g1 ENSDARG00000022315, ENSDARG00000110951 210.86 1580.73 ATPase H+ transporting V1 subunit G1 [Source:ZFIN;Acc:ZDB-GENE-030131-6965]
49. npc2 ENSDARG00000090912 210.86 1580.73 Niemann-Pick disease, type C2 [Source:ZFIN;Acc:ZDB-GENE-021206-13]
50. aldob ENSDARG00000053684 201.17 1508.09 aldolase b, fructose-bisphosphate [Source:ZFIN;Acc:ZDB-GENE-030131-383]
51. rpl21 ENSDARG00000010516, ENSDARG00000110263 198.75 1489.95 ribosomal protein L21 [Source:ZFIN;Acc:ZDB-GENE-030131-8512]
52. ptmab ENSDARG00000101766 196.32 1471.73 prothymosin alpha b [Source:ZFIN;Acc:ZDB-GENE-030131-8681]
53. paics ENSDARG00000033539 193.90 1453.59 phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoimidazole succinocarboxamide synthetase [Source:ZFIN;Acc:ZDB-GENE-030131-9762]
54. prdx5 ENSDARG00000055064 193.90 1453.59 peroxiredoxin 5 [Source:ZFIN;Acc:ZDB-GENE-050522-159]
55. pvalb9 ENSDARG00000071601, ENSDARG00000113946 193.90 1453.59 parvalbumin 9 [Source:ZFIN;Acc:ZDB-GENE-030805-4]
56. cyt1l ENSDARG00000036832 191.48 1435.45 type I cytokeratin, enveloping layer, like [Source:ZFIN;Acc:ZDB-GENE-061026-4]
57. rpl26 ENSDARG00000102317 189.05 1417.23 ribosomal protein L26 [Source:ZFIN;Acc:ZDB-GENE-040426-2117]
58. cst3 ENSDARG00000007795 186.63 1399.09 cystatin C (amyloid angiopathy and cerebral hemorrhage) [Source:ZFIN;Acc:ZDB-GENE-030131-373]
59. ctsll ENSDARG00000011701, ENSDARG00000112885 186.63 1399.09 cathepsin L, like [Source:ZFIN;Acc:ZDB-GENE-041010-76]
60. rpl23 ENSDARG00000053457 181.78 1362.73 ribosomal protein L23 [Source:ZFIN;Acc:ZDB-GENE-030131-8756]
61. rpl8 ENSDARG00000014867 181.78 1362.73 ribosomal protein L8 [Source:ZFIN;Acc:ZDB-GENE-040426-1670]
62. abca1b ENSDARG00000079009 176.93 1326.37 ATP-binding cassette, sub-family A (ABC1), member 1B [Source:ZFIN;Acc:ZDB-GENE-030131-9826]
63. ssr2 ENSDARG00000005230 176.93 1326.37 signal sequence receptor, beta [Source:ZFIN;Acc:ZDB-GENE-010413-1]
64. btf3 ENSDARG00000035400, ENSDARG00000116462 174.51 1308.23 basic transcription factor 3 [Source:ZFIN;Acc:ZDB-GENE-030131-8731]
65. mat1a ENSDARG00000039605, ENSDARG00000115975 174.51 1308.23 methionine adenosyltransferase I, alpha [Source:ZFIN;Acc:ZDB-GENE-030131-6127]
66. pfn1 ENSDARG00000088091 172.09 1290.09 profilin 1 [Source:ZFIN;Acc:ZDB-GENE-031002-33]
67. si:dkeyp-86f7.3 si:dkeyp-86f7.3 172.09 1290.09
68. rpl36a ENSDARG00000058105, ENSDARG00000112656 167.24 1253.73 ribosomal protein L36A [Source:ZFIN;Acc:ZDB-GENE-020423-1]
69. h1f0 ENSDARG00000038559 164.81 1235.52 H1 histone family, member 0 [Source:ZFIN;Acc:ZDB-GENE-030131-337]
70. slc43a2b ENSDARG00000061120, ENSDARG00000117188 164.81 1235.52 solute carrier family 43 (amino acid system L transporter), member 2b [Source:ZFIN;Acc:ZDB-GENE-041212-6]
71. zgc:153867 164.81 1235.52 zgc:153867, transcript variant X2
72. bcam ENSDARG00000090190 162.39 1217.37 basal cell adhesion molecule (Lutheran blood group) [Source:ZFIN;Acc:ZDB-GENE-060929-620]
73. hspa8 ENSDARG00000068992, ENSDARG00000114726 162.39 1217.37 heat shock protein 8 [Source:ZFIN;Acc:ZDB-GENE-990415-92]
74. ldhba ENSDARG00000019644 159.97 1199.23 lactate dehydrogenase Ba [Source:ZFIN;Acc:ZDB-GENE-991026-6]
75. pabpc1a ENSDARG00000017219 159.97 1199.23 poly(A) binding protein, cytoplasmic 1a [Source:ZFIN;Acc:ZDB-GENE-030131-3238]
76. rps27a ENSDARG00000032725, ENSDARG00000114059 159.97 1199.23 ribosomal protein S27a [Source:ZFIN;Acc:ZDB-GENE-030131-10018]
77. tpma ENSDARG00000033683 159.97 1199.23 alpha-tropomyosin [Source:ZFIN;Acc:ZDB-GENE-990415-269]
78. ctsba ENSDARG00000055120 155.12 1162.87 cathepsin Ba [Source:ZFIN;Acc:ZDB-GENE-040426-2650]
79. psap ENSDARG00000013968 155.12 1162.87 prosaposin [Source:ZFIN;Acc:ZDB-GENE-020108-1]
80. hsp90ab1 ENSDARG00000029150 152.70 1144.73 heat shock protein 90, alpha (cytosolic), class B member 1 [Source:ZFIN;Acc:ZDB-GENE-990415-95]
81. rpl18a ENSDARG00000025073 152.70 1144.73 ribosomal protein L18a [Source:ZFIN;Acc:ZDB-GENE-040426-1071]
82. rpl19 ENSDARG00000013307 152.70 1144.73 ribosomal protein L19 [Source:ZFIN;Acc:ZDB-GENE-040426-2290]
83. AC024175.17 AC024175.17 150.27 1126.51
84. apoc2 ENSDARG00000092155 147.85 1108.37 apolipoprotein C-II [Source:ZFIN;Acc:ZDB-GENE-030131-2168]
85. mt-co1 ENSDARG00000063905 147.85 1108.37 cytochrome c oxidase I, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-14]
86. rpl11 ENSDARG00000043509 147.85 1108.37 ribosomal protein L11 [Source:ZFIN;Acc:ZDB-GENE-040625-147]
87. ahcy ENSDARG00000005191 145.42 1090.16 adenosylhomocysteinase [Source:ZFIN;Acc:ZDB-GENE-031219-6]
88. gamt ENSDARG00000070844, ENSDARG00000109945 140.58 1053.87 guanidinoacetate N-methyltransferase [Source:ZFIN;Acc:ZDB-GENE-051030-97]
89. rpl18 ENSDARG00000029533 140.58 1053.87 ribosomal protein L18 [Source:ZFIN;Acc:ZDB-GENE-040801-165]
90. rps14 ENSDARG00000036629 140.58 1053.87 ribosomal protein S14 [Source:ZFIN;Acc:ZDB-GENE-030131-8631]
91. rps23 ENSDARG00000021838 140.58 1053.87 ribosomal protein S23 [Source:ZFIN;Acc:ZDB-GENE-080220-50]
92. aldh9a1a.1 ENSDARG00000069100, ENSDARG00000114905 138.15 1035.66 aldehyde dehydrogenase 9 family, member A1a, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-030131-1257]
93. capns1b ENSDARG00000013804 138.15 1035.66 calpain, small subunit 1 b [Source:ZFIN;Acc:ZDB-GENE-030131-5206]
94. aldoaa ENSDARG00000011665 135.73 1017.51 aldolase a, fructose-bisphosphate, a [Source:ZFIN;Acc:ZDB-GENE-030131-8369]
95. eif5a ENSDARG00000017235 135.73 1017.51 eukaryotic translation initiation factor 5A [Source:ZFIN;Acc:ZDB-GENE-040426-2229]
96. myh9a ENSDARG00000063295 135.73 1017.51 myosin, heavy chain 9a, non-muscle [Source:ZFIN;Acc:ZDB-GENE-030131-5870]
97. fahd2a ENSDARG00000103759 133.31 999.37 fumarylacetoacetate hydrolase domain containing 2A [Source:ZFIN;Acc:ZDB-GENE-040426-2499]
98. krt8 ENSDARG00000058358, ENSDARG00000109279 133.31 999.37 keratin 8 [Source:ZFIN;Acc:ZDB-GENE-030411-5]
99. rps26l ENSDARG00000030408 133.31 999.37 ribosomal protein S26, like [Source:ZFIN;Acc:ZDB-GENE-040426-1706]
100. AL954137.2 ENSDARG00000114408 130.88 981.16
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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