Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Zebrafish_28hpf_trunk2, section s15.

Sample reads: 133,411. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. AC024175.4 AC024175.4 23519.37 176292.91
2. krt4 ENSDARG00000017624, ENSDARG00000115790 4412.94 33077.84 keratin 4 [Source:ZFIN;Acc:ZDB-GENE-000607-83]
3. apoc1l apoc1l 1720.93 12899.49
4. apoa2 ENSDARG00000015866 1675.90 12561.96 apolipoprotein A-II [Source:ZFIN;Acc:ZDB-GENE-030131-1046]
5. apoeb ENSDARG00000040295 1630.87 12224.43 apolipoprotein Eb [Source:ZFIN;Acc:ZDB-GENE-980526-368]
6. tmsb4x ENSDARG00000077777 1581.92 11857.52 thymosin beta 4 X-linked [Source:ZFIN;Acc:ZDB-GENE-030131-8304]
7. zgc:161979 zgc:161979 1487.95 11153.15
8. apoa1b ENSDARG00000101324 1448.79 10859.62 apolipoprotein A-Ib [Source:ZFIN;Acc:ZDB-GENE-050302-172]
9. actb2 ENSDARG00000037870 1190.36 8922.52 actin, beta 2 [Source:ZFIN;Acc:ZDB-GENE-000329-3]
10. zgc:161979_1 zgc:161979_1 1168.82 8761.06
11. apobb apobb 1117.92 8379.53
12. mt-nd4 ENSDARG00000063917 1059.18 7939.24 NADH dehydrogenase 4, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-10]
13. mt-nd2 ENSDARG00000063899 1037.65 7777.86 NADH dehydrogenase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-8]
14. actb1 ENSDARG00000037746, ENSDARG00000113649 835.99 6266.29 actin, beta 1 [Source:ZFIN;Acc:ZDB-GENE-000329-1]
15. eef1a1l1 ENSDARG00000020850 794.88 5958.14 eukaryotic translation elongation factor 1 alpha 1, like 1 [Source:ZFIN;Acc:ZDB-GENE-990415-52]
16. fabp2 ENSDARG00000006427, ENSDARG00000110230 747.89 5605.92 fatty acid binding protein 2, intestinal [Source:ZFIN;Acc:ZDB-GENE-991019-5]
17. mt-co2 ENSDARG00000063908 722.44 5415.16 cytochrome c oxidase II, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-15]
18. apoa1a ENSDARG00000012076, ENSDARG00000110395 704.82 5283.08 apolipoprotein A-Ia [Source:ZFIN;Acc:ZDB-GENE-990415-14]
19. apoa4 apoa4 577.56 4329.19
20. ctsla ENSDARG00000007836 538.40 4035.66 cathepsin La [Source:ZFIN;Acc:ZDB-GENE-030131-106]
21. si:dkey-150i13.2 ENSDARG00000071052 524.70 3932.97 si:dkey-150i13.2 [Source:ZFIN;Acc:ZDB-GENE-090312-157]
22. mt-atp6 ENSDARG00000063911 505.12 3786.20 ATP synthase 6, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-18]
23. mt-co3 ENSDARG00000063912 493.37 3698.13 cytochrome c oxidase III, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-16]
24. zgc:153129 zgc:153129 440.51 3301.91
25. mt-nd1 ENSDARG00000063895 426.81 3199.22 NADH dehydrogenase 1, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-7]
26. si:dkey-151g10.6 si:dkey-151g10.6 422.89 3169.83
27. mt-cyb ENSDARG00000063924 420.93 3155.14 cytochrome b, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-17]
28. eef2b ENSDARG00000100371, ENSDARG00000109247 393.52 2949.69 eukaryotic translation elongation factor 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5128]
29. rbp4 ENSDARG00000101199 321.08 2406.70 retinol binding protein 4, plasma [Source:ZFIN;Acc:ZDB-GENE-000210-19]
30. ppiaa ENSDARG00000009212 315.21 2362.70 peptidylprolyl isomerase Aa (cyclophilin A) [Source:ZFIN;Acc:ZDB-GENE-030131-8556]
31. icn ENSDARG00000009978 305.42 2289.32 ictacalcin [Source:ZFIN;Acc:ZDB-GENE-030131-8599]
32. atp1b1a ENSDARG00000013144 295.63 2215.94 ATPase Na+/K+ transporting subunit beta 1a [Source:ZFIN;Acc:ZDB-GENE-001127-3]
33. bhmt ENSDARG00000013430 295.63 2215.94 betaine-homocysteine methyltransferase [Source:ZFIN;Acc:ZDB-GENE-030131-947]
34. fetub ENSDARG00000053973 291.72 2186.63 fetuin B [Source:ZFIN;Acc:ZDB-GENE-050208-4]
35. cfl1l ENSDARG00000012972 287.80 2157.25 cofilin 1 (non-muscle), like [Source:ZFIN;Acc:ZDB-GENE-040426-2770]
36. hmga1a ENSDARG00000028335 287.80 2157.25 high mobility group AT-hook 1a [Source:ZFIN;Acc:ZDB-GENE-010502-1]
37. atp1a1a.3 ENSDARG00000039131 274.10 2054.56 ATPase Na+/K+ transporting subunit alpha 1a, tandem duplicate 3 [Source:ZFIN;Acc:ZDB-GENE-001212-3]
38. hsp90ab1 ENSDARG00000029150 266.26 1995.79 heat shock protein 90, alpha (cytosolic), class B member 1 [Source:ZFIN;Acc:ZDB-GENE-990415-95]
39. mt-co1 ENSDARG00000063905 266.26 1995.79 cytochrome c oxidase I, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-14]
40. hspa8 ENSDARG00000068992, ENSDARG00000114726 258.43 1937.10 heat shock protein 8 [Source:ZFIN;Acc:ZDB-GENE-990415-92]
41. AC024175.17 AC024175.17 246.69 1849.10
42. mt2 ENSDARG00000041623, ENSDARG00000113583 246.69 1849.10 metallothionein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4174]
43. rpl23 ENSDARG00000053457 238.85 1790.34 ribosomal protein L23 [Source:ZFIN;Acc:ZDB-GENE-030131-8756]
44. rpl10a ENSDARG00000042905, ENSDARG00000115649 229.07 1717.03 ribosomal protein L10a [Source:ZFIN;Acc:ZDB-GENE-030131-2025]
45. zgc:112425 zgc:112425 227.11 1702.34
46. si:dkeyp-86f7.3 si:dkeyp-86f7.3 221.23 1658.26
47. atp6v1g1 ENSDARG00000022315, ENSDARG00000110951 215.36 1614.26 ATPase H+ transporting V1 subunit G1 [Source:ZFIN;Acc:ZDB-GENE-030131-6965]
48. gatm ENSDARG00000036239 211.45 1584.95 glycine amidinotransferase (L-arginine:glycine amidinotransferase) [Source:ZFIN;Acc:ZDB-GENE-021015-1]
49. UBC ENSDARG00000102632 209.49 1570.26 ubiquitin C [Source:ZFIN;Acc:ZDB-GENE-061110-88]
50. cyt1l ENSDARG00000036832 209.49 1570.26 type I cytokeratin, enveloping layer, like [Source:ZFIN;Acc:ZDB-GENE-061026-4]
51. krt8 ENSDARG00000058358, ENSDARG00000109279 209.49 1570.26 keratin 8 [Source:ZFIN;Acc:ZDB-GENE-030411-5]
52. rpl26 ENSDARG00000102317 209.49 1570.26 ribosomal protein L26 [Source:ZFIN;Acc:ZDB-GENE-040426-2117]
53. h1f0 ENSDARG00000038559 207.53 1555.57 H1 histone family, member 0 [Source:ZFIN;Acc:ZDB-GENE-030131-337]
54. zgc:92533 zgc:92533 207.53 1555.57
55. npc2 ENSDARG00000090912 205.57 1540.88 Niemann-Pick disease, type C2 [Source:ZFIN;Acc:ZDB-GENE-021206-13]
56. capns1b ENSDARG00000013804 201.66 1511.57 calpain, small subunit 1 b [Source:ZFIN;Acc:ZDB-GENE-030131-5206]
57. ptmab ENSDARG00000101766 201.66 1511.57 prothymosin alpha b [Source:ZFIN;Acc:ZDB-GENE-030131-8681]
58. btf3 ENSDARG00000035400, ENSDARG00000116462 199.70 1496.88 basic transcription factor 3 [Source:ZFIN;Acc:ZDB-GENE-030131-8731]
59. rps27a ENSDARG00000032725, ENSDARG00000114059 197.74 1482.19 ribosomal protein S27a [Source:ZFIN;Acc:ZDB-GENE-030131-10018]
60. APOA4 APOA4 195.78 1467.50
61. sb:cb252 sb:cb252 193.82 1452.81
62. paics ENSDARG00000033539 191.87 1438.19 phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoimidazole succinocarboxamide synthetase [Source:ZFIN;Acc:ZDB-GENE-030131-9762]
63. tfa ENSDARG00000016771 191.87 1438.19 transferrin-a [Source:ZFIN;Acc:ZDB-GENE-980526-35]
64. rpl11 ENSDARG00000043509 187.95 1408.81 ribosomal protein L11 [Source:ZFIN;Acc:ZDB-GENE-040625-147]
65. sepp1a 184.04 1379.50 selenoprotein P, plasma, 1a
66. dbi ENSDARG00000026369 180.12 1350.12 diazepam binding inhibitor (GABA receptor modulator, acyl-CoA binding protein) [Source:ZFIN;Acc:ZDB-GENE-040426-1861]
67. eif5a ENSDARG00000017235 178.16 1335.42 eukaryotic translation initiation factor 5A [Source:ZFIN;Acc:ZDB-GENE-040426-2229]
68. rpl18a ENSDARG00000025073 178.16 1335.42 ribosomal protein L18a [Source:ZFIN;Acc:ZDB-GENE-040426-1071]
69. rps23 ENSDARG00000021838 174.25 1306.12 ribosomal protein S23 [Source:ZFIN;Acc:ZDB-GENE-080220-50]
70. pla2g12b ENSDARG00000015662 170.33 1276.73 phospholipase A2, group XIIB [Source:ZFIN;Acc:ZDB-GENE-040426-2771]
71. hbbe3 ENSDARG00000038147, ENSDARG00000109344 168.37 1262.04 hemoglobin beta embryonic-3 [Source:ZFIN;Acc:ZDB-GENE-980526-287]
72. rpl21 ENSDARG00000010516, ENSDARG00000110263 168.37 1262.04 ribosomal protein L21 [Source:ZFIN;Acc:ZDB-GENE-030131-8512]
73. rps14 ENSDARG00000036629 168.37 1262.04 ribosomal protein S14 [Source:ZFIN;Acc:ZDB-GENE-030131-8631]
74. aldob ENSDARG00000053684 166.42 1247.43 aldolase b, fructose-bisphosphate [Source:ZFIN;Acc:ZDB-GENE-030131-383]
75. pabpc1a ENSDARG00000017219 166.42 1247.43 poly(A) binding protein, cytoplasmic 1a [Source:ZFIN;Acc:ZDB-GENE-030131-3238]
76. pfn1 ENSDARG00000088091 162.50 1218.04 profilin 1 [Source:ZFIN;Acc:ZDB-GENE-031002-33]
77. rpl8 ENSDARG00000014867 160.54 1203.35 ribosomal protein L8 [Source:ZFIN;Acc:ZDB-GENE-040426-1670]
78. slc43a2b ENSDARG00000061120, ENSDARG00000117188 160.54 1203.35 solute carrier family 43 (amino acid system L transporter), member 2b [Source:ZFIN;Acc:ZDB-GENE-041212-6]
79. cd63 ENSDARG00000025147, ENSDARG00000115979 158.58 1188.66 CD63 molecule [Source:ZFIN;Acc:ZDB-GENE-030131-180]
80. rpl19 ENSDARG00000013307 158.58 1188.66 ribosomal protein L19 [Source:ZFIN;Acc:ZDB-GENE-040426-2290]
81. rpl7 ENSDARG00000007320 158.58 1188.66 ribosomal protein L7 [Source:ZFIN;Acc:ZDB-GENE-030131-8654]
82. myl12.1 ENSDARG00000099766 154.67 1159.35 myosin, light chain 12, genome duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4918]
83. aldoaa ENSDARG00000011665 152.71 1144.66 aldolase a, fructose-bisphosphate, a [Source:ZFIN;Acc:ZDB-GENE-030131-8369]
84. rps27.1 ENSDARG00000023298 152.71 1144.66 ribosomal protein S27, isoform 1 [Source:ZFIN;Acc:ZDB-GENE-050522-549]
85. ldhba ENSDARG00000019644 148.79 1115.28 lactate dehydrogenase Ba [Source:ZFIN;Acc:ZDB-GENE-991026-6]
86. APOB APOB 146.84 1100.66
87. ca2 ENSDARG00000014488 146.84 1100.66 carbonic anhydrase II [Source:ZFIN;Acc:ZDB-GENE-031219-5]
88. hnrnpa0l ENSDARG00000036161, ENSDARG00000076380, ENSDARG00000114889 146.84 1100.66 heterogeneous nuclear ribonucleoprotein A0, like [Source:ZFIN;Acc:ZDB-GENE-030131-618]
89. rps26l ENSDARG00000030408 146.84 1100.66 ribosomal protein S26, like [Source:ZFIN;Acc:ZDB-GENE-040426-1706]
90. hbae3 ENSDARG00000079305 144.88 1085.97 hemoglobin alpha embryonic-3 [Source:ZFIN;Acc:ZDB-GENE-990706-3]
91. bcam ENSDARG00000090190 142.92 1071.28 basal cell adhesion molecule (Lutheran blood group) [Source:ZFIN;Acc:ZDB-GENE-060929-620]
92. rpl9 ENSDARG00000037350, ENSDARG00000112384 142.92 1071.28 ribosomal protein L9 [Source:ZFIN;Acc:ZDB-GENE-030131-8646]
93. glula ENSDARG00000099776 140.96 1056.59 glutamate-ammonia ligase (glutamine synthase) a [Source:ZFIN;Acc:ZDB-GENE-030131-688]
94. rplp1 ENSDARG00000021864 140.96 1056.59 ribosomal protein, large, P1 [Source:ZFIN;Acc:ZDB-GENE-030131-8663]
95. ssr2 ENSDARG00000005230 140.96 1056.59 signal sequence receptor, beta [Source:ZFIN;Acc:ZDB-GENE-010413-1]
96. zgc:153867 140.96 1056.59 zgc:153867, transcript variant X2
97. ATP5B 139.01 1041.97 ATP synthase, H+ transporting, mitochondrial F1 complex, beta polypeptide
98. rpl18 ENSDARG00000029533 139.01 1041.97 ribosomal protein L18 [Source:ZFIN;Acc:ZDB-GENE-040801-165]
99. rpl36a ENSDARG00000058105, ENSDARG00000112656 139.01 1041.97 ribosomal protein L36A [Source:ZFIN;Acc:ZDB-GENE-020423-1]
100. AL954137.2 ENSDARG00000114408 135.09 1012.59
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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