Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Zebrafish_28hpf_trunk2, section s14.

Sample reads: 133,408. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. AC024175.4 AC024175.4 29692.76 222571.06
2. krt4 ENSDARG00000017624, ENSDARG00000115790 3784.32 28366.51 keratin 4 [Source:ZFIN;Acc:ZDB-GENE-000607-83]
3. apoc1l apoc1l 1694.85 12704.26
4. tmsb4x ENSDARG00000077777 1629.08 12211.26 thymosin beta 4 X-linked [Source:ZFIN;Acc:ZDB-GENE-030131-8304]
5. apoeb ENSDARG00000040295 1495.01 11206.30 apolipoprotein Eb [Source:ZFIN;Acc:ZDB-GENE-980526-368]
6. actb2 ENSDARG00000037870 1409.00 10561.59 actin, beta 2 [Source:ZFIN;Acc:ZDB-GENE-000329-3]
7. apoa1b ENSDARG00000101324 1353.35 10144.44 apolipoprotein A-Ib [Source:ZFIN;Acc:ZDB-GENE-050302-172]
8. apoa2 ENSDARG00000015866 1345.76 10087.55 apolipoprotein A-II [Source:ZFIN;Acc:ZDB-GENE-030131-1046]
9. mt-nd2 ENSDARG00000063899 1262.28 9461.80 NADH dehydrogenase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-8]
10. zgc:161979 zgc:161979 1199.04 8987.77
11. zgc:161979_1 zgc:161979_1 1166.16 8741.30
12. apobb apobb 991.61 7432.91
13. mt-nd4 ENSDARG00000063917 915.72 6864.06 NADH dehydrogenase 4, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-10]
14. mt-co2 ENSDARG00000063908 908.14 6807.24 cytochrome c oxidase II, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-15]
15. actb1 ENSDARG00000037746, ENSDARG00000113649 806.95 6048.74 actin, beta 1 [Source:ZFIN;Acc:ZDB-GENE-000329-1]
16. eef1a1l1 ENSDARG00000020850 728.53 5460.92 eukaryotic translation elongation factor 1 alpha 1, like 1 [Source:ZFIN;Acc:ZDB-GENE-990415-52]
17. apoa1a ENSDARG00000012076, ENSDARG00000110395 670.35 5024.81 apolipoprotein A-Ia [Source:ZFIN;Acc:ZDB-GENE-990415-14]
18. mt-co3 ENSDARG00000063912 657.70 4929.99 cytochrome c oxidase III, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-16]
19. fabp2 ENSDARG00000006427, ENSDARG00000110230 629.88 4721.46 fatty acid binding protein 2, intestinal [Source:ZFIN;Acc:ZDB-GENE-991019-5]
20. mt-atp6 ENSDARG00000063911 602.05 4512.85 ATP synthase 6, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-18]
21. mt-nd1 ENSDARG00000063895 571.70 4285.35 NADH dehydrogenase 1, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-7]
22. apoa4 apoa4 566.64 4247.42
23. si:dkey-150i13.2 ENSDARG00000071052 498.34 3735.46 si:dkey-150i13.2 [Source:ZFIN;Acc:ZDB-GENE-090312-157]
24. atp1b1a ENSDARG00000013144 485.69 3640.64 ATPase Na+/K+ transporting subunit beta 1a [Source:ZFIN;Acc:ZDB-GENE-001127-3]
25. si:dkey-151g10.6 si:dkey-151g10.6 419.92 3147.64
26. bhmt ENSDARG00000013430 394.62 2957.99 betaine-homocysteine methyltransferase [Source:ZFIN;Acc:ZDB-GENE-030131-947]
27. ctsla ENSDARG00000007836 394.62 2957.99 cathepsin La [Source:ZFIN;Acc:ZDB-GENE-030131-106]
28. ppiaa ENSDARG00000009212 387.03 2901.10 peptidylprolyl isomerase Aa (cyclophilin A) [Source:ZFIN;Acc:ZDB-GENE-030131-8556]
29. zgc:153129 zgc:153129 381.97 2863.17
30. eef2b ENSDARG00000100371, ENSDARG00000109247 374.38 2806.28 eukaryotic translation elongation factor 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5128]
31. fetub ENSDARG00000053973 338.97 2540.85 fetuin B [Source:ZFIN;Acc:ZDB-GENE-050208-4]
32. hspa8 ENSDARG00000068992, ENSDARG00000114726 331.38 2483.96 heat shock protein 8 [Source:ZFIN;Acc:ZDB-GENE-990415-92]
33. mt-cyb ENSDARG00000063924 326.32 2446.03 cytochrome b, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-17]
34. atp1a1a.3 ENSDARG00000039131 275.73 2066.82 ATPase Na+/K+ transporting subunit alpha 1a, tandem duplicate 3 [Source:ZFIN;Acc:ZDB-GENE-001212-3]
35. ptmab ENSDARG00000101766 265.61 1990.96 prothymosin alpha b [Source:ZFIN;Acc:ZDB-GENE-030131-8681]
36. cfl1l ENSDARG00000012972 245.37 1839.25 cofilin 1 (non-muscle), like [Source:ZFIN;Acc:ZDB-GENE-040426-2770]
37. hmga1a ENSDARG00000028335 237.78 1782.35 high mobility group AT-hook 1a [Source:ZFIN;Acc:ZDB-GENE-010502-1]
38. mt-co1 ENSDARG00000063905 237.78 1782.35 cytochrome c oxidase I, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-14]
39. icn ENSDARG00000009978 232.73 1744.50 ictacalcin [Source:ZFIN;Acc:ZDB-GENE-030131-8599]
40. AC024175.17 AC024175.17 227.67 1706.57
41. rpl10a ENSDARG00000042905, ENSDARG00000115649 220.08 1649.68 ribosomal protein L10a [Source:ZFIN;Acc:ZDB-GENE-030131-2025]
42. mt2 ENSDARG00000041623, ENSDARG00000113583 209.96 1573.82 metallothionein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4174]
43. pabpc1a ENSDARG00000017219 207.43 1554.85 poly(A) binding protein, cytoplasmic 1a [Source:ZFIN;Acc:ZDB-GENE-030131-3238]
44. rpl23 ENSDARG00000053457 207.43 1554.85 ribosomal protein L23 [Source:ZFIN;Acc:ZDB-GENE-030131-8756]
45. btf3 ENSDARG00000035400, ENSDARG00000116462 202.37 1516.93 basic transcription factor 3 [Source:ZFIN;Acc:ZDB-GENE-030131-8731]
46. rpl8 ENSDARG00000014867 202.37 1516.93 ribosomal protein L8 [Source:ZFIN;Acc:ZDB-GENE-040426-1670]
47. rpl9 ENSDARG00000037350, ENSDARG00000112384 202.37 1516.93 ribosomal protein L9 [Source:ZFIN;Acc:ZDB-GENE-030131-8646]
48. hbbe3 ENSDARG00000038147, ENSDARG00000109344 199.84 1497.96 hemoglobin beta embryonic-3 [Source:ZFIN;Acc:ZDB-GENE-980526-287]
49. rplp1 ENSDARG00000021864 199.84 1497.96 ribosomal protein, large, P1 [Source:ZFIN;Acc:ZDB-GENE-030131-8663]
50. gatm ENSDARG00000036239 197.31 1479.00 glycine amidinotransferase (L-arginine:glycine amidinotransferase) [Source:ZFIN;Acc:ZDB-GENE-021015-1]
51. rpl11 ENSDARG00000043509 197.31 1479.00 ribosomal protein L11 [Source:ZFIN;Acc:ZDB-GENE-040625-147]
52. rbp4 ENSDARG00000101199 194.78 1460.03 retinol binding protein 4, plasma [Source:ZFIN;Acc:ZDB-GENE-000210-19]
53. zgc:112425 zgc:112425 194.78 1460.03
54. rpl21 ENSDARG00000010516, ENSDARG00000110263 192.25 1441.07 ribosomal protein L21 [Source:ZFIN;Acc:ZDB-GENE-030131-8512]
55. rpl26 ENSDARG00000102317 192.25 1441.07 ribosomal protein L26 [Source:ZFIN;Acc:ZDB-GENE-040426-2117]
56. zgc:92533 zgc:92533 192.25 1441.07
57. rps23 ENSDARG00000021838 187.19 1403.14 ribosomal protein S23 [Source:ZFIN;Acc:ZDB-GENE-080220-50]
58. UBC ENSDARG00000102632 184.66 1384.17 ubiquitin C [Source:ZFIN;Acc:ZDB-GENE-061110-88]
59. eif5a ENSDARG00000017235 182.13 1365.21 eukaryotic translation initiation factor 5A [Source:ZFIN;Acc:ZDB-GENE-040426-2229]
60. rps27a ENSDARG00000032725, ENSDARG00000114059 182.13 1365.21 ribosomal protein S27a [Source:ZFIN;Acc:ZDB-GENE-030131-10018]
61. cd63 ENSDARG00000025147, ENSDARG00000115979 179.60 1346.25 CD63 molecule [Source:ZFIN;Acc:ZDB-GENE-030131-180]
62. si:dkeyp-86f7.3 si:dkeyp-86f7.3 179.60 1346.25
63. hsp90ab1 ENSDARG00000029150 174.54 1308.32 heat shock protein 90, alpha (cytosolic), class B member 1 [Source:ZFIN;Acc:ZDB-GENE-990415-95]
64. rpl36a ENSDARG00000058105, ENSDARG00000112656 174.54 1308.32 ribosomal protein L36A [Source:ZFIN;Acc:ZDB-GENE-020423-1]
65. sepp1a 172.01 1289.35 selenoprotein P, plasma, 1a
66. dbi ENSDARG00000026369 169.48 1270.39 diazepam binding inhibitor (GABA receptor modulator, acyl-CoA binding protein) [Source:ZFIN;Acc:ZDB-GENE-040426-1861]
67. h1f0 ENSDARG00000038559 169.48 1270.39 H1 histone family, member 0 [Source:ZFIN;Acc:ZDB-GENE-030131-337]
68. APOA4 APOA4 166.96 1251.50
69. rpl36 ENSDARG00000100588 166.96 1251.50 ribosomal protein L36 [Source:ZFIN;Acc:ZDB-GENE-040622-2]
70. paics ENSDARG00000033539 164.43 1232.53 phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoimidazole succinocarboxamide synthetase [Source:ZFIN;Acc:ZDB-GENE-030131-9762]
71. pfn1 ENSDARG00000088091 161.90 1213.57 profilin 1 [Source:ZFIN;Acc:ZDB-GENE-031002-33]
72. aldoaa ENSDARG00000011665 154.31 1156.68 aldolase a, fructose-bisphosphate, a [Source:ZFIN;Acc:ZDB-GENE-030131-8369]
73. atp6v1g1 ENSDARG00000022315, ENSDARG00000110951 154.31 1156.68 ATPase H+ transporting V1 subunit G1 [Source:ZFIN;Acc:ZDB-GENE-030131-6965]
74. rpl19 ENSDARG00000013307 154.31 1156.68 ribosomal protein L19 [Source:ZFIN;Acc:ZDB-GENE-040426-2290]
75. slc43a2b ENSDARG00000061120, ENSDARG00000117188 154.31 1156.68 solute carrier family 43 (amino acid system L transporter), member 2b [Source:ZFIN;Acc:ZDB-GENE-041212-6]
76. rps2 ENSDARG00000077291 151.78 1137.71 ribosomal protein S2 [Source:ZFIN;Acc:ZDB-GENE-040426-2454]
77. sb:cb252 sb:cb252 151.78 1137.71
78. rpl7 ENSDARG00000007320 149.25 1118.75 ribosomal protein L7 [Source:ZFIN;Acc:ZDB-GENE-030131-8654]
79. rps5 ENSDARG00000043453 149.25 1118.75 ribosomal protein S5 [Source:ZFIN;Acc:ZDB-GENE-020419-12]
80. ATP5B 146.72 1099.78 ATP synthase, H+ transporting, mitochondrial F1 complex, beta polypeptide
81. rps14 ENSDARG00000036629 146.72 1099.78 ribosomal protein S14 [Source:ZFIN;Acc:ZDB-GENE-030131-8631]
82. APOB APOB 144.19 1080.82
83. id1 ENSDARG00000040764 144.19 1080.82 inhibitor of DNA binding 1 [Source:ZFIN;Acc:ZDB-GENE-990415-96]
84. COX5B_1 ENSDARG00000015978 141.66 1061.86 cytochrome c oxidase subunit 5B [Source:HGNC Symbol;Acc:HGNC:2269]
85. cyt1l ENSDARG00000036832 141.66 1061.86 type I cytokeratin, enveloping layer, like [Source:ZFIN;Acc:ZDB-GENE-061026-4]
86. npc2 ENSDARG00000090912 141.66 1061.86 Niemann-Pick disease, type C2 [Source:ZFIN;Acc:ZDB-GENE-021206-13]
87. AL954137.2 ENSDARG00000114408 139.13 1042.89
88. prps1a ENSDARG00000015524 139.13 1042.89 phosphoribosyl pyrophosphate synthetase 1A [Source:ZFIN;Acc:ZDB-GENE-011212-5]
89. rpl18a ENSDARG00000025073 139.13 1042.89 ribosomal protein L18a [Source:ZFIN;Acc:ZDB-GENE-040426-1071]
90. rpl27 ENSDARG00000015128 139.13 1042.89 ribosomal protein L27 [Source:ZFIN;Acc:ZDB-GENE-030131-4343]
91. krt8 ENSDARG00000058358, ENSDARG00000109279 136.60 1023.93 keratin 8 [Source:ZFIN;Acc:ZDB-GENE-030411-5]
92. RPL29 ENSDARG00000077717 134.07 1004.96 ribosomal protein L29 [Source:ZFIN;Acc:ZDB-GENE-040801-167]
93. rps27.1 ENSDARG00000023298 134.07 1004.96 ribosomal protein S27, isoform 1 [Source:ZFIN;Acc:ZDB-GENE-050522-549]
94. ssr2 ENSDARG00000005230 134.07 1004.96 signal sequence receptor, beta [Source:ZFIN;Acc:ZDB-GENE-010413-1]
95. apoc2 ENSDARG00000092155 131.54 986.00 apolipoprotein C-II [Source:ZFIN;Acc:ZDB-GENE-030131-2168]
96. gamt ENSDARG00000070844, ENSDARG00000109945 131.54 986.00 guanidinoacetate N-methyltransferase [Source:ZFIN;Acc:ZDB-GENE-051030-97]
97. oaz1b ENSDARG00000104782 131.54 986.00 ornithine decarboxylase antizyme 1b [Source:ZFIN;Acc:ZDB-GENE-020731-5]
98. rps15 ENSDARG00000070849, ENSDARG00000110979 131.54 986.00 ribosomal protein S15 [Source:ZFIN;Acc:ZDB-GENE-030131-9092]
99. rps26l ENSDARG00000030408 131.54 986.00 ribosomal protein S26, like [Source:ZFIN;Acc:ZDB-GENE-040426-1706]
100. zgc:153867 131.54 986.00 zgc:153867, transcript variant X2
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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