Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Zebrafish_28hpf_trunk1, section s9.

Sample reads: 133,410. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. AC024175.4 AC024175.4 36381.21 272702.90
2. mt-co2 ENSDARG00000063908 1837.38 13772.46 cytochrome c oxidase II, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-15]
3. tpma ENSDARG00000033683 1785.75 13385.46 alpha-tropomyosin [Source:ZFIN;Acc:ZDB-GENE-990415-269]
4. mt-nd2 ENSDARG00000063899 1771.90 13281.64 NADH dehydrogenase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-8]
5. ckmb ENSDARG00000040565 1410.47 10572.47 creatine kinase, muscle b [Source:ZFIN;Acc:ZDB-GENE-040426-2128]
6. mt-co3 ENSDARG00000063912 1376.46 10317.54 cytochrome c oxidase III, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-16]
7. krt4 ENSDARG00000017624, ENSDARG00000115790 1224.08 9175.35 keratin 4 [Source:ZFIN;Acc:ZDB-GENE-000607-83]
8. si:dkey-151g10.6 si:dkey-151g10.6 1106.96 8297.45
9. mt-atp6 ENSDARG00000063911 1079.26 8089.82 ATP synthase 6, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-18]
10. mt-nd1 ENSDARG00000063895 945.77 7089.22 NADH dehydrogenase 1, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-7]
11. ckma ENSDARG00000035327, ENSDARG00000114671 943.25 7070.33 creatine kinase, muscle a [Source:ZFIN;Acc:ZDB-GENE-980526-109]
12. actc1b ENSDARG00000099197 921.84 6909.84 actin, alpha, cardiac muscle 1b [Source:ZFIN;Acc:ZDB-GENE-000322-1]
13. mt-nd4 ENSDARG00000063917 877.76 6579.43 NADH dehydrogenase 4, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-10]
14. mylpfa ENSDARG00000053254, ENSDARG00000112448, ENSDARG00000113256 792.13 5937.57 myosin light chain, phosphorylatable, fast skeletal muscle a [Source:ZFIN;Acc:ZDB-GENE-990712-15]
15. mylz3 ENSDARG00000017441 775.76 5814.87 myosin, light polypeptide 3, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-000322-6]
16. atp2a1 ENSDARG00000020574 724.12 5427.79 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 1 [Source:ZFIN;Acc:ZDB-GENE-020905-1]
17. rpl23 ENSDARG00000053457 662.42 4965.31 ribosomal protein L23 [Source:ZFIN;Acc:ZDB-GENE-030131-8756]
18. myhz1.3 ENSDARG00000067997 651.08 4880.31 myosin, heavy polypeptide 1.3, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-070705-74]
19. eef1a1l1 ENSDARG00000020850 642.27 4814.27 eukaryotic translation elongation factor 1 alpha 1, like 1 [Source:ZFIN;Acc:ZDB-GENE-990415-52]
20. tnnc2 ENSDARG00000070835, ENSDARG00000111155 624.63 4682.04 troponin C type 2 (fast) [Source:ZFIN;Acc:ZDB-GENE-000322-2]
21. rpl10a ENSDARG00000042905, ENSDARG00000115649 617.08 4625.45 ribosomal protein L10a [Source:ZFIN;Acc:ZDB-GENE-030131-2025]
22. ttna ttna 561.67 4210.11
23. zgc:66286 zgc:66286 542.78 4068.52
24. AC024175.17 AC024175.17 531.44 3983.52
25. ttnb ttnb 531.44 3983.52
26. myl10 ENSDARG00000062592 530.18 3974.07 myosin, light chain 10, regulatory [Source:ZFIN;Acc:ZDB-GENE-050417-421]
27. rpl18a ENSDARG00000025073 523.89 3926.93 ribosomal protein L18a [Source:ZFIN;Acc:ZDB-GENE-040426-1071]
28. ppiaa ENSDARG00000009212 507.52 3804.22 peptidylprolyl isomerase Aa (cyclophilin A) [Source:ZFIN;Acc:ZDB-GENE-030131-8556]
29. mt-cyb ENSDARG00000063924 505.00 3785.33 cytochrome b, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-17]
30. rpl26 ENSDARG00000102317 469.74 3521.03 ribosomal protein L26 [Source:ZFIN;Acc:ZDB-GENE-040426-2117]
31. acta1b ENSDARG00000055618 467.22 3502.14 actin, alpha 1b, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-030131-55]
32. rpl21 ENSDARG00000010516, ENSDARG00000110263 457.14 3426.59 ribosomal protein L21 [Source:ZFIN;Acc:ZDB-GENE-030131-8512]
33. rpl8 ENSDARG00000014867 452.10 3388.81 ribosomal protein L8 [Source:ZFIN;Acc:ZDB-GENE-040426-1670]
34. btf3 ENSDARG00000035400, ENSDARG00000116462 429.44 3218.96 basic transcription factor 3 [Source:ZFIN;Acc:ZDB-GENE-030131-8731]
35. acta1a ENSDARG00000036371 428.18 3209.51 actin, alpha 1a, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-050417-267]
36. tnni2b.1 ENSDARG00000035958 428.18 3209.51 troponin I type 2b (skeletal, fast), tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-050417-49]
37. rpl36a ENSDARG00000058105, ENSDARG00000112656 423.14 3171.73 ribosomal protein L36A [Source:ZFIN;Acc:ZDB-GENE-020423-1]
38. rps27a ENSDARG00000032725, ENSDARG00000114059 421.88 3162.29 ribosomal protein S27a [Source:ZFIN;Acc:ZDB-GENE-030131-10018]
39. aldoab ENSDARG00000034470 397.95 2982.92 aldolase a, fructose-bisphosphate, b [Source:ZFIN;Acc:ZDB-GENE-040426-2299]
40. si:dkey-150i13.2 ENSDARG00000071052 396.69 2973.47 si:dkey-150i13.2 [Source:ZFIN;Acc:ZDB-GENE-090312-157]
41. rps23 ENSDARG00000021838 392.92 2945.21 ribosomal protein S23 [Source:ZFIN;Acc:ZDB-GENE-080220-50]
42. rps14 ENSDARG00000036629 389.14 2916.88 ribosomal protein S14 [Source:ZFIN;Acc:ZDB-GENE-030131-8631]
43. myhz2 ENSDARG00000012944 387.88 2907.43 myosin, heavy polypeptide 2, fast muscle specific [Source:ZFIN;Acc:ZDB-GENE-020604-1]
44. tmsb4x ENSDARG00000077777 385.36 2888.55 thymosin beta 4 X-linked [Source:ZFIN;Acc:ZDB-GENE-030131-8304]
45. rpl11 ENSDARG00000043509 368.99 2765.84 ribosomal protein L11 [Source:ZFIN;Acc:ZDB-GENE-040625-147]
46. myl1 ENSDARG00000014196 367.73 2756.40 myosin, light chain 1, alkali; skeletal, fast [Source:ZFIN;Acc:ZDB-GENE-030131-8109]
47. hspa8 ENSDARG00000068992, ENSDARG00000114726 360.17 2699.73 heat shock protein 8 [Source:ZFIN;Acc:ZDB-GENE-990415-92]
48. rpl27 ENSDARG00000015128 358.91 2690.28 ribosomal protein L27 [Source:ZFIN;Acc:ZDB-GENE-030131-4343]
49. rpl19 ENSDARG00000013307 355.14 2662.03 ribosomal protein L19 [Source:ZFIN;Acc:ZDB-GENE-040426-2290]
50. tnnt3a ENSDARG00000030270 355.14 2662.03 troponin T type 3a (skeletal, fast) [Source:ZFIN;Acc:ZDB-GENE-000322-3]
51. actb2 ENSDARG00000037870 340.02 2548.69 actin, beta 2 [Source:ZFIN;Acc:ZDB-GENE-000329-3]
52. rpl36 ENSDARG00000100588 334.99 2510.99 ribosomal protein L36 [Source:ZFIN;Acc:ZDB-GENE-040622-2]
53. rplp1 ENSDARG00000021864 334.99 2510.99 ribosomal protein, large, P1 [Source:ZFIN;Acc:ZDB-GENE-030131-8663]
54. rps20 ENSDARG00000036044 334.99 2510.99 ribosomal protein S20 [Source:ZFIN;Acc:ZDB-GENE-040426-2284]
55. eef2b ENSDARG00000100371, ENSDARG00000109247 317.35 2378.76 eukaryotic translation elongation factor 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5128]
56. rpl9 ENSDARG00000037350, ENSDARG00000112384 316.10 2369.39 ribosomal protein L9 [Source:ZFIN;Acc:ZDB-GENE-030131-8646]
57. rps26l ENSDARG00000030408 309.80 2322.17 ribosomal protein S26, like [Source:ZFIN;Acc:ZDB-GENE-040426-1706]
58. rps15 ENSDARG00000070849, ENSDARG00000110979 295.95 2218.35 ribosomal protein S15 [Source:ZFIN;Acc:ZDB-GENE-030131-9092]
59. hsp90aa1.1 ENSDARG00000010478 292.17 2190.02 heat shock protein 90, alpha (cytosolic), class A member 1, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-990415-94]
60. rps12 ENSDARG00000036875, ENSDARG00000115157 288.39 2161.69 ribosomal protein S12 [Source:ZFIN;Acc:ZDB-GENE-030131-8951]
61. tnni2a.4 ENSDARG00000029069 282.09 2114.46 troponin I type 2a (skeletal, fast), tandem duplicate 4 [Source:ZFIN;Acc:ZDB-GENE-040625-119]
62. rps9 ENSDARG00000011405, ENSDARG00000113248 280.83 2105.02 ribosomal protein S9 [Source:ZFIN;Acc:ZDB-GENE-010724-15]
63. mt-co1 ENSDARG00000063905 277.06 2076.76 cytochrome c oxidase I, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-14]
64. rpl7 ENSDARG00000007320 273.28 2048.43 ribosomal protein L7 [Source:ZFIN;Acc:ZDB-GENE-030131-8654]
65. tnnt2c ENSDARG00000032242 260.68 1953.98 troponin T2c, cardiac [Source:ZFIN;Acc:ZDB-GENE-030520-1]
66. RPL29 ENSDARG00000077717 258.17 1935.17 ribosomal protein L29 [Source:ZFIN;Acc:ZDB-GENE-040801-167]
67. pvalb2 ENSDARG00000002768, ENSDARG00000114085 243.05 1821.83 parvalbumin 2 [Source:ZFIN;Acc:ZDB-GENE-000322-4]
68. col2a1a ENSDARG00000069093, ENSDARG00000111202 241.79 1812.39 collagen, type II, alpha 1a [Source:ZFIN;Acc:ZDB-GENE-980526-192]
69. faua ENSDARG00000099022 241.79 1812.39 Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed a [Source:ZFIN;Acc:ZDB-GENE-040426-1700]
70. rps15a ENSDARG00000010160 241.79 1812.39 ribosomal protein S15a [Source:ZFIN;Acc:ZDB-GENE-030131-8708]
71. smyhc1 ENSDARG00000099959, ENSDARG00000115916 239.28 1793.57 slow myosin heavy chain 1 [Source:ZFIN;Acc:ZDB-GENE-030131-271]
72. rpl18 ENSDARG00000029533 234.24 1755.79 ribosomal protein L18 [Source:ZFIN;Acc:ZDB-GENE-040801-165]
73. mt-nd3 ENSDARG00000063914 231.72 1736.91 NADH dehydrogenase 3, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-9]
74. rps24 ENSDARG00000039347 231.72 1736.91 ribosomal protein S24 [Source:ZFIN;Acc:ZDB-GENE-040109-5]
75. rpl6 ENSDARG00000058451 230.46 1727.46 ribosomal protein L6 [Source:ZFIN;Acc:ZDB-GENE-030131-8671]
76. rpl15 ENSDARG00000009285 227.94 1708.57 ribosomal protein L15 [Source:ZFIN;Acc:ZDB-GENE-040801-183]
77. rplp2 ENSDARG00000101406 220.39 1651.98 ribosomal protein, large P2 [Source:ZFIN;Acc:ZDB-GENE-031018-2]
78. rps29 ENSDARG00000041232 220.39 1651.98 ribosomal protein S29 [Source:ZFIN;Acc:ZDB-GENE-040622-5]
79. rpl35 ENSDARG00000018334 219.13 1642.53 ribosomal protein L35 [Source:ZFIN;Acc:ZDB-GENE-020419-2]
80. rps19 ENSDARG00000030602 219.13 1642.53 ribosomal protein S19 [Source:ZFIN;Acc:ZDB-GENE-040426-1716]
81. eif5a ENSDARG00000017235 217.87 1633.09 eukaryotic translation initiation factor 5A [Source:ZFIN;Acc:ZDB-GENE-040426-2229]
82. fabp3 ENSDARG00000023290 215.35 1614.20 fatty acid binding protein 3, muscle and heart [Source:ZFIN;Acc:ZDB-GENE-020318-2]
83. rps2 ENSDARG00000077291 215.35 1614.20 ribosomal protein S2 [Source:ZFIN;Acc:ZDB-GENE-040426-2454]
84. rps27.1 ENSDARG00000023298 211.57 1585.87 ribosomal protein S27, isoform 1 [Source:ZFIN;Acc:ZDB-GENE-050522-549]
85. tmem38a ENSDARG00000024047 207.79 1557.53 transmembrane protein 38A [Source:ZFIN;Acc:ZDB-GENE-040426-1888]
86. rps7 ENSDARG00000042566 206.53 1548.09 ribosomal protein S7 [Source:ZFIN;Acc:ZDB-GENE-040426-1718]
87. zgc:112425 zgc:112425 204.01 1529.20
88. rpl24 ENSDARG00000099104 202.75 1519.75 ribosomal protein L24 [Source:ZFIN;Acc:ZDB-GENE-020419-25]
89. tpm3 ENSDARG00000005162 202.75 1519.75 tropomyosin 3 [Source:ZFIN;Acc:ZDB-GENE-030826-16]
90. rpl17 ENSDARG00000057556 201.50 1510.39 ribosomal protein L17 [Source:ZFIN;Acc:ZDB-GENE-030131-8585]
91. rpl30 ENSDARG00000035871, ENSDARG00000109253 201.50 1510.39 ribosomal protein L30 [Source:ZFIN;Acc:ZDB-GENE-030131-8657]
92. rps4x ENSDARG00000014690 201.50 1510.39 ribosomal protein S4 X-linked [Source:ZFIN;Acc:ZDB-GENE-040927-19]
93. desma ENSDARG00000058656 196.46 1472.61 desmin a [Source:ZFIN;Acc:ZDB-GENE-980526-221]
94. rpl14 ENSDARG00000103433 196.46 1472.61 ribosomal protein L14 [Source:ZFIN;Acc:ZDB-GENE-030131-2085]
95. hmga1a ENSDARG00000028335 193.94 1453.72 high mobility group AT-hook 1a [Source:ZFIN;Acc:ZDB-GENE-010502-1]
96. actb1 ENSDARG00000037746, ENSDARG00000113649 192.68 1444.27 actin, beta 1 [Source:ZFIN;Acc:ZDB-GENE-000329-1]
97. rplp2l ENSDARG00000011201 192.68 1444.27 ribosomal protein, large P2, like [Source:ZFIN;Acc:ZDB-GENE-070327-2]
98. rpl5b ENSDARG00000015862, ENSDARG00000109661 190.16 1425.38 ribosomal protein L5b [Source:ZFIN;Acc:ZDB-GENE-040625-93]
99. rplp0 ENSDARG00000051783 190.16 1425.38 ribosomal protein, large, P0 [Source:ZFIN;Acc:ZDB-GENE-000629-1]
100. rps6 ENSDARG00000019778 188.90 1415.94 ribosomal protein S6 [Source:ZFIN;Acc:ZDB-GENE-040801-8]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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