Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Zebrafish_28hpf_trunk1, section s5.

Sample reads: 133,405. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. AC024175.4 AC024175.4 28079.92 210486.83
2. tpma ENSDARG00000033683 1772.76 13288.59 alpha-tropomyosin [Source:ZFIN;Acc:ZDB-GENE-990415-269]
3. mt-nd2 ENSDARG00000063899 1690.89 12674.90 NADH dehydrogenase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-8]
4. ckmb ENSDARG00000040565 1425.48 10685.39 creatine kinase, muscle b [Source:ZFIN;Acc:ZDB-GENE-040426-2128]
5. mt-co2 ENSDARG00000063908 1319.22 9888.86 cytochrome c oxidase II, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-15]
6. krt4 ENSDARG00000017624, ENSDARG00000115790 1235.51 9261.37 keratin 4 [Source:ZFIN;Acc:ZDB-GENE-000607-83]
7. mt-nd4 ENSDARG00000063917 1133.39 8495.88 NADH dehydrogenase 4, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-10]
8. mt-co3 ENSDARG00000063912 1082.79 8116.58 cytochrome c oxidase III, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-16]
9. mt-atp6 ENSDARG00000063911 1045.53 7837.28 ATP synthase 6, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-18]
10. si:dkey-151g10.6 si:dkey-151g10.6 906.16 6792.57
11. mt-nd1 ENSDARG00000063895 824.28 6178.80 NADH dehydrogenase 1, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-7]
12. mylpfa ENSDARG00000053254, ENSDARG00000112448, ENSDARG00000113256 719.41 5392.69 myosin light chain, phosphorylatable, fast skeletal muscle a [Source:ZFIN;Acc:ZDB-GENE-990712-15]
13. mylz3 ENSDARG00000017441 714.81 5358.21 myosin, light polypeptide 3, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-000322-6]
14. ckma ENSDARG00000035327, ENSDARG00000114671 709.29 5316.83 creatine kinase, muscle a [Source:ZFIN;Acc:ZDB-GENE-980526-109]
15. eef1a1l1 ENSDARG00000020850 672.95 5044.43 eukaryotic translation elongation factor 1 alpha 1, like 1 [Source:ZFIN;Acc:ZDB-GENE-990415-52]
16. zgc:112425 zgc:112425 661.91 4961.67
17. ppiaa ENSDARG00000009212 647.65 4854.78 peptidylprolyl isomerase Aa (cyclophilin A) [Source:ZFIN;Acc:ZDB-GENE-030131-8556]
18. hmga1a ENSDARG00000028335 645.81 4840.99 high mobility group AT-hook 1a [Source:ZFIN;Acc:ZDB-GENE-010502-1]
19. actc1b ENSDARG00000099197 612.69 4592.72 actin, alpha, cardiac muscle 1b [Source:ZFIN;Acc:ZDB-GENE-000322-1]
20. myhz1.3 ENSDARG00000067997 555.66 4165.22 myosin, heavy polypeptide 1.3, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-070705-74]
21. atp2a1 ENSDARG00000020574 534.50 4006.61 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 1 [Source:ZFIN;Acc:ZDB-GENE-020905-1]
22. rpl10a ENSDARG00000042905, ENSDARG00000115649 524.38 3930.75 ribosomal protein L10a [Source:ZFIN;Acc:ZDB-GENE-030131-2025]
23. tnnc2 ENSDARG00000070835, ENSDARG00000111155 523.46 3923.85 troponin C type 2 (fast) [Source:ZFIN;Acc:ZDB-GENE-000322-2]
24. mt-cyb ENSDARG00000063924 521.16 3906.61 cytochrome b, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-17]
25. rpl18a ENSDARG00000025073 503.22 3772.13 ribosomal protein L18a [Source:ZFIN;Acc:ZDB-GENE-040426-1071]
26. rpl23 ENSDARG00000053457 496.78 3723.86 ribosomal protein L23 [Source:ZFIN;Acc:ZDB-GENE-030131-8756]
27. actb2 ENSDARG00000037870 478.38 3585.93 actin, beta 2 [Source:ZFIN;Acc:ZDB-GENE-000329-3]
28. hspa8 ENSDARG00000068992, ENSDARG00000114726 456.30 3420.42 heat shock protein 8 [Source:ZFIN;Acc:ZDB-GENE-990415-92]
29. rpl8 ENSDARG00000014867 444.80 3334.22 ribosomal protein L8 [Source:ZFIN;Acc:ZDB-GENE-040426-1670]
30. rpl21 ENSDARG00000010516, ENSDARG00000110263 436.52 3272.15 ribosomal protein L21 [Source:ZFIN;Acc:ZDB-GENE-030131-8512]
31. btf3 ENSDARG00000035400, ENSDARG00000116462 430.54 3227.32 basic transcription factor 3 [Source:ZFIN;Acc:ZDB-GENE-030131-8731]
32. rpl26 ENSDARG00000102317 429.62 3220.43 ribosomal protein L26 [Source:ZFIN;Acc:ZDB-GENE-040426-2117]
33. eef2b ENSDARG00000100371, ENSDARG00000109247 425.94 3192.84 eukaryotic translation elongation factor 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5128]
34. rps23 ENSDARG00000021838 399.72 2996.30 ribosomal protein S23 [Source:ZFIN;Acc:ZDB-GENE-080220-50]
35. acta1b ENSDARG00000055618 398.34 2985.95 actin, alpha 1b, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-030131-55]
36. zgc:66286 zgc:66286 371.20 2782.51
37. rpl36a ENSDARG00000058105, ENSDARG00000112656 369.36 2768.72 ribosomal protein L36A [Source:ZFIN;Acc:ZDB-GENE-020423-1]
38. tmsb4x ENSDARG00000077777 364.30 2730.79 thymosin beta 4 X-linked [Source:ZFIN;Acc:ZDB-GENE-030131-8304]
39. acta1a ENSDARG00000036371 350.96 2630.79 actin, alpha 1a, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-050417-267]
40. ptmab ENSDARG00000101766 346.36 2596.31 prothymosin alpha b [Source:ZFIN;Acc:ZDB-GENE-030131-8681]
41. tnni2b.1 ENSDARG00000035958 342.68 2568.73 troponin I type 2b (skeletal, fast), tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-050417-49]
42. rpl9 ENSDARG00000037350, ENSDARG00000112384 341.30 2558.38 ribosomal protein L9 [Source:ZFIN;Acc:ZDB-GENE-030131-8646]
43. actb1 ENSDARG00000037746, ENSDARG00000113649 340.84 2554.93 actin, beta 1 [Source:ZFIN;Acc:ZDB-GENE-000329-1]
44. mt-co1 ENSDARG00000063905 334.87 2510.18 cytochrome c oxidase I, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-14]
45. myl10 ENSDARG00000062592 333.03 2496.39 myosin, light chain 10, regulatory [Source:ZFIN;Acc:ZDB-GENE-050417-421]
46. fabp3 ENSDARG00000023290 331.65 2486.05 fatty acid binding protein 3, muscle and heart [Source:ZFIN;Acc:ZDB-GENE-020318-2]
47. rps27a ENSDARG00000032725, ENSDARG00000114059 324.29 2430.87 ribosomal protein S27a [Source:ZFIN;Acc:ZDB-GENE-030131-10018]
48. rps14 ENSDARG00000036629 321.07 2406.74 ribosomal protein S14 [Source:ZFIN;Acc:ZDB-GENE-030131-8631]
49. myl1 ENSDARG00000014196 315.09 2361.91 myosin, light chain 1, alkali; skeletal, fast [Source:ZFIN;Acc:ZDB-GENE-030131-8109]
50. AL954137.2 ENSDARG00000114408 302.67 2268.81
51. rpl27 ENSDARG00000015128 300.83 2255.02 ribosomal protein L27 [Source:ZFIN;Acc:ZDB-GENE-030131-4343]
52. ttna ttna 295.31 2213.64
53. rps2 ENSDARG00000077291 292.09 2189.50 ribosomal protein S2 [Source:ZFIN;Acc:ZDB-GENE-040426-2454]
54. rplp1 ENSDARG00000021864 291.63 2186.06 ribosomal protein, large, P1 [Source:ZFIN;Acc:ZDB-GENE-030131-8663]
55. ttnb ttnb 291.63 2186.06
56. rpl19 ENSDARG00000013307 285.19 2137.78 ribosomal protein L19 [Source:ZFIN;Acc:ZDB-GENE-040426-2290]
57. aldoab ENSDARG00000034470 284.73 2134.33 aldolase a, fructose-bisphosphate, b [Source:ZFIN;Acc:ZDB-GENE-040426-2299]
58. rpl36 ENSDARG00000100588 284.73 2134.33 ribosomal protein L36 [Source:ZFIN;Acc:ZDB-GENE-040622-2]
59. myhz2 ENSDARG00000012944 283.35 2123.99 myosin, heavy polypeptide 2, fast muscle specific [Source:ZFIN;Acc:ZDB-GENE-020604-1]
60. pcna ENSDARG00000054155 279.67 2096.40 proliferating cell nuclear antigen [Source:ZFIN;Acc:ZDB-GENE-000210-8]
61. pvalb2 ENSDARG00000002768, ENSDARG00000114085 278.29 2086.06 parvalbumin 2 [Source:ZFIN;Acc:ZDB-GENE-000322-4]
62. rps9 ENSDARG00000011405, ENSDARG00000113248 271.85 2037.79 ribosomal protein S9 [Source:ZFIN;Acc:ZDB-GENE-010724-15]
63. rpl7 ENSDARG00000007320 270.47 2027.44 ribosomal protein L7 [Source:ZFIN;Acc:ZDB-GENE-030131-8654]
64. rpl11 ENSDARG00000043509 269.55 2020.54 ribosomal protein L11 [Source:ZFIN;Acc:ZDB-GENE-040625-147]
65. tnnt3a ENSDARG00000030270 260.35 1951.58 troponin T type 3a (skeletal, fast) [Source:ZFIN;Acc:ZDB-GENE-000322-3]
66. rps26l ENSDARG00000030408 257.13 1927.44 ribosomal protein S26, like [Source:ZFIN;Acc:ZDB-GENE-040426-1706]
67. rpl18 ENSDARG00000029533 241.49 1810.21 ribosomal protein L18 [Source:ZFIN;Acc:ZDB-GENE-040801-165]
68. rpsa ENSDARG00000019181 240.11 1799.86 ribosomal protein SA [Source:ZFIN;Acc:ZDB-GENE-040426-811]
69. si:dkeyp-86f7.3 si:dkeyp-86f7.3 240.11 1799.86
70. rpl15 ENSDARG00000009285 239.65 1796.41 ribosomal protein L15 [Source:ZFIN;Acc:ZDB-GENE-040801-183]
71. eif5a ENSDARG00000017235 238.27 1786.07 eukaryotic translation initiation factor 5A [Source:ZFIN;Acc:ZDB-GENE-040426-2229]
72. id1 ENSDARG00000040764 235.51 1765.38 inhibitor of DNA binding 1 [Source:ZFIN;Acc:ZDB-GENE-990415-96]
73. hsp90aa1.1 ENSDARG00000010478 234.59 1758.48 heat shock protein 90, alpha (cytosolic), class A member 1, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-990415-94]
74. hsp90ab1 ENSDARG00000029150 229.99 1724.00 heat shock protein 90, alpha (cytosolic), class B member 1 [Source:ZFIN;Acc:ZDB-GENE-990415-95]
75. rps6 ENSDARG00000019778 228.15 1710.21 ribosomal protein S6 [Source:ZFIN;Acc:ZDB-GENE-040801-8]
76. zgc:123194 zgc:123194 228.15 1710.21
77. tpm3 ENSDARG00000005162 226.77 1699.87 tropomyosin 3 [Source:ZFIN;Acc:ZDB-GENE-030826-16]
78. rplp0 ENSDARG00000051783 225.39 1689.52 ribosomal protein, large, P0 [Source:ZFIN;Acc:ZDB-GENE-000629-1]
79. rps4x ENSDARG00000014690 220.33 1651.59 ribosomal protein S4 X-linked [Source:ZFIN;Acc:ZDB-GENE-040927-19]
80. rps15 ENSDARG00000070849, ENSDARG00000110979 219.41 1644.70 ribosomal protein S15 [Source:ZFIN;Acc:ZDB-GENE-030131-9092]
81. rpl6 ENSDARG00000058451 218.03 1634.35 ribosomal protein L6 [Source:ZFIN;Acc:ZDB-GENE-030131-8671]
82. rps12 ENSDARG00000036875, ENSDARG00000115157 212.97 1596.42 ribosomal protein S12 [Source:ZFIN;Acc:ZDB-GENE-030131-8951]
83. faua ENSDARG00000099022 208.83 1565.39 Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed a [Source:ZFIN;Acc:ZDB-GENE-040426-1700]
84. tnni2a.4 ENSDARG00000029069 208.37 1561.94 troponin I type 2a (skeletal, fast), tandem duplicate 4 [Source:ZFIN;Acc:ZDB-GENE-040625-119]
85. rpl14 ENSDARG00000103433 206.99 1551.60 ribosomal protein L14 [Source:ZFIN;Acc:ZDB-GENE-030131-2085]
86. cirbp cirbp 206.07 1544.70
87. rps19 ENSDARG00000030602 205.61 1541.25 ribosomal protein S19 [Source:ZFIN;Acc:ZDB-GENE-040426-1716]
88. rps15a ENSDARG00000010160 205.15 1537.80 ribosomal protein S15a [Source:ZFIN;Acc:ZDB-GENE-030131-8708]
89. rps27.1 ENSDARG00000023298 201.93 1513.67 ribosomal protein S27, isoform 1 [Source:ZFIN;Acc:ZDB-GENE-050522-549]
90. rps20 ENSDARG00000036044 199.63 1496.42 ribosomal protein S20 [Source:ZFIN;Acc:ZDB-GENE-040426-2284]
91. rpl5b ENSDARG00000015862, ENSDARG00000109661 198.25 1486.08 ribosomal protein L5b [Source:ZFIN;Acc:ZDB-GENE-040625-93]
92. hmgn2 ENSDARG00000099572 196.41 1472.29 high mobility group nucleosomal binding domain 2 [Source:ZFIN;Acc:ZDB-GENE-051030-81]
93. rps5 ENSDARG00000043453 189.97 1424.01 ribosomal protein S5 [Source:ZFIN;Acc:ZDB-GENE-020419-12]
94. rps29 ENSDARG00000041232 186.75 1399.88 ribosomal protein S29 [Source:ZFIN;Acc:ZDB-GENE-040622-5]
95. rps24 ENSDARG00000039347 181.23 1358.50 ribosomal protein S24 [Source:ZFIN;Acc:ZDB-GENE-040109-5]
96. rplp2l ENSDARG00000011201 179.39 1344.71 ribosomal protein, large P2, like [Source:ZFIN;Acc:ZDB-GENE-070327-2]
97. ATP5B 178.01 1334.36 ATP synthase, H+ transporting, mitochondrial F1 complex, beta polypeptide
98. RPL29 ENSDARG00000077717 176.63 1324.02 ribosomal protein L29 [Source:ZFIN;Acc:ZDB-GENE-040801-167]
99. hnrnpa0l ENSDARG00000036161, ENSDARG00000076380, ENSDARG00000114889 175.71 1317.12 heterogeneous nuclear ribonucleoprotein A0, like [Source:ZFIN;Acc:ZDB-GENE-030131-618]
100. ran ENSDARG00000057026 174.33 1306.78 RAN, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-990415-88]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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