Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Zebrafish_28hpf_trunk1, section s29.

Sample reads: 133,403. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. AC024175.4 AC024175.4 17162.88 128654.35
2. apoa1b ENSDARG00000101324 4903.68 36758.39 apolipoprotein A-Ib [Source:ZFIN;Acc:ZDB-GENE-050302-172]
3. krt4 ENSDARG00000017624, ENSDARG00000115790 4012.10 30075.03 keratin 4 [Source:ZFIN;Acc:ZDB-GENE-000607-83]
4. apoa1a ENSDARG00000012076, ENSDARG00000110395 2228.95 16708.39 apolipoprotein A-Ia [Source:ZFIN;Acc:ZDB-GENE-990415-14]
5. apoeb ENSDARG00000040295 2228.95 16708.39 apolipoprotein Eb [Source:ZFIN;Acc:ZDB-GENE-980526-368]
6. apoa2 ENSDARG00000015866 2117.50 15872.95 apolipoprotein A-II [Source:ZFIN;Acc:ZDB-GENE-030131-1046]
7. zgc:161979 zgc:161979 2117.50 15872.95
8. mt-nd2 ENSDARG00000063899 1894.60 14202.08 NADH dehydrogenase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-8]
9. apoc1l apoc1l 1671.71 12531.27
10. apobb apobb 1560.26 11695.84
11. mt-co2 ENSDARG00000063908 1560.26 11695.84 cytochrome c oxidase II, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-15]
12. mt-nd4 ENSDARG00000063917 1448.81 10860.40 NADH dehydrogenase 4, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-10]
13. ckmb ENSDARG00000040565 1225.92 9189.60 creatine kinase, muscle b [Source:ZFIN;Acc:ZDB-GENE-040426-2128]
14. mt-atp6 ENSDARG00000063911 1225.92 9189.60 ATP synthase 6, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-18]
15. zgc:161979_1 zgc:161979_1 1114.47 8354.16
16. actb1 ENSDARG00000037746, ENSDARG00000113649 1003.03 7518.79 actin, beta 1 [Source:ZFIN;Acc:ZDB-GENE-000329-1]
17. actb2 ENSDARG00000037870 891.58 6683.36 actin, beta 2 [Source:ZFIN;Acc:ZDB-GENE-000329-3]
18. tmsb4x ENSDARG00000077777 891.58 6683.36 thymosin beta 4 X-linked [Source:ZFIN;Acc:ZDB-GENE-030131-8304]
19. eef1a1l1 ENSDARG00000020850 780.13 5847.92 eukaryotic translation elongation factor 1 alpha 1, like 1 [Source:ZFIN;Acc:ZDB-GENE-990415-52]
20. fetub ENSDARG00000053973 780.13 5847.92 fetuin B [Source:ZFIN;Acc:ZDB-GENE-050208-4]
21. zgc:92533 zgc:92533 780.13 5847.92
22. gamt ENSDARG00000070844, ENSDARG00000109945 668.68 5012.48 guanidinoacetate N-methyltransferase [Source:ZFIN;Acc:ZDB-GENE-051030-97]
23. psap ENSDARG00000013968 668.68 5012.48 prosaposin [Source:ZFIN;Acc:ZDB-GENE-020108-1]
24. zgc:112425 zgc:112425 668.68 5012.48
25. zgc:153129 zgc:153129 668.68 5012.48
26. apoa4 apoa4 557.24 4177.12
27. ckma ENSDARG00000035327, ENSDARG00000114671 557.24 4177.12 creatine kinase, muscle a [Source:ZFIN;Acc:ZDB-GENE-980526-109]
28. ctsla ENSDARG00000007836 557.24 4177.12 cathepsin La [Source:ZFIN;Acc:ZDB-GENE-030131-106]
29. dbi ENSDARG00000026369 557.24 4177.12 diazepam binding inhibitor (GABA receptor modulator, acyl-CoA binding protein) [Source:ZFIN;Acc:ZDB-GENE-040426-1861]
30. mylz3 ENSDARG00000017441 557.24 4177.12 myosin, light polypeptide 3, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-000322-6]
31. rpl24 ENSDARG00000099104 557.24 4177.12 ribosomal protein L24 [Source:ZFIN;Acc:ZDB-GENE-020419-25]
32. rpl8 ENSDARG00000014867 557.24 4177.12 ribosomal protein L8 [Source:ZFIN;Acc:ZDB-GENE-040426-1670]
33. rps2 ENSDARG00000077291 557.24 4177.12 ribosomal protein S2 [Source:ZFIN;Acc:ZDB-GENE-040426-2454]
34. rps20 ENSDARG00000036044 557.24 4177.12 ribosomal protein S20 [Source:ZFIN;Acc:ZDB-GENE-040426-2284]
35. rps9 ENSDARG00000011405, ENSDARG00000113248 557.24 4177.12 ribosomal protein S9 [Source:ZFIN;Acc:ZDB-GENE-010724-15]
36. ssr2 ENSDARG00000005230 557.24 4177.12 signal sequence receptor, beta [Source:ZFIN;Acc:ZDB-GENE-010413-1]
37. cfl1l ENSDARG00000012972 445.79 3341.68 cofilin 1 (non-muscle), like [Source:ZFIN;Acc:ZDB-GENE-040426-2770]
38. mt-co1 ENSDARG00000063905 445.79 3341.68 cytochrome c oxidase I, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-14]
39. myl1 ENSDARG00000014196 445.79 3341.68 myosin, light chain 1, alkali; skeletal, fast [Source:ZFIN;Acc:ZDB-GENE-030131-8109]
40. pcna ENSDARG00000054155 445.79 3341.68 proliferating cell nuclear antigen [Source:ZFIN;Acc:ZDB-GENE-000210-8]
41. rpl14 ENSDARG00000103433 445.79 3341.68 ribosomal protein L14 [Source:ZFIN;Acc:ZDB-GENE-030131-2085]
42. rpl21 ENSDARG00000010516, ENSDARG00000110263 445.79 3341.68 ribosomal protein L21 [Source:ZFIN;Acc:ZDB-GENE-030131-8512]
43. rpl26 ENSDARG00000102317 445.79 3341.68 ribosomal protein L26 [Source:ZFIN;Acc:ZDB-GENE-040426-2117]
44. rpl9 ENSDARG00000037350, ENSDARG00000112384 445.79 3341.68 ribosomal protein L9 [Source:ZFIN;Acc:ZDB-GENE-030131-8646]
45. rps27a ENSDARG00000032725, ENSDARG00000114059 445.79 3341.68 ribosomal protein S27a [Source:ZFIN;Acc:ZDB-GENE-030131-10018]
46. sepp1a 445.79 3341.68 selenoprotein P, plasma, 1a
47. si:dkey-151g10.6 si:dkey-151g10.6 445.79 3341.68
48. ttnb ttnb 445.79 3341.68
49. APOA4 APOA4 334.34 2506.24
50. actc1b ENSDARG00000099197 334.34 2506.24 actin, alpha, cardiac muscle 1b [Source:ZFIN;Acc:ZDB-GENE-000322-1]
51. apoea ENSDARG00000102004 334.34 2506.24 apolipoprotein Ea [Source:ZFIN;Acc:ZDB-GENE-010724-18]
52. atp2a1 ENSDARG00000020574 334.34 2506.24 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 1 [Source:ZFIN;Acc:ZDB-GENE-020905-1]
53. bhmt ENSDARG00000013430 334.34 2506.24 betaine-homocysteine methyltransferase [Source:ZFIN;Acc:ZDB-GENE-030131-947]
54. cfl1 ENSDARG00000021124 334.34 2506.24 cofilin 1 [Source:ZFIN;Acc:ZDB-GENE-030131-215]
55. cyt1l ENSDARG00000036832 334.34 2506.24 type I cytokeratin, enveloping layer, like [Source:ZFIN;Acc:ZDB-GENE-061026-4]
56. eef1g ENSDARG00000056119 334.34 2506.24 eukaryotic translation elongation factor 1 gamma [Source:ZFIN;Acc:ZDB-GENE-020423-3]
57. eif1b ENSDARG00000012688 334.34 2506.24 eukaryotic translation initiation factor 1B [Source:ZFIN;Acc:ZDB-GENE-030131-956]
58. eno3 ENSDARG00000039007 334.34 2506.24 enolase 3, (beta, muscle) [Source:ZFIN;Acc:ZDB-GENE-031006-5]
59. f11r f11r 334.34 2506.24
60. hmga1a ENSDARG00000028335 334.34 2506.24 high mobility group AT-hook 1a [Source:ZFIN;Acc:ZDB-GENE-010502-1]
61. mt-co3 ENSDARG00000063912 334.34 2506.24 cytochrome c oxidase III, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-16]
62. mt-nd1 ENSDARG00000063895 334.34 2506.24 NADH dehydrogenase 1, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-7]
63. pfn2 ENSDARG00000003952 334.34 2506.24 profilin 2 [Source:ZFIN;Acc:ZDB-GENE-040115-4]
64. rbp4 ENSDARG00000101199 334.34 2506.24 retinol binding protein 4, plasma [Source:ZFIN;Acc:ZDB-GENE-000210-19]
65. rpl34 ENSDARG00000029500 334.34 2506.24 ribosomal protein L34 [Source:ZFIN;Acc:ZDB-GENE-040426-1033]
66. rpl36 ENSDARG00000100588 334.34 2506.24 ribosomal protein L36 [Source:ZFIN;Acc:ZDB-GENE-040622-2]
67. rps14 ENSDARG00000036629 334.34 2506.24 ribosomal protein S14 [Source:ZFIN;Acc:ZDB-GENE-030131-8631]
68. rps6 ENSDARG00000019778 334.34 2506.24 ribosomal protein S6 [Source:ZFIN;Acc:ZDB-GENE-040801-8]
69. rrbp1b ENSDARG00000041703, ENSDARG00000115474 334.34 2506.24 ribosome binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-030429-36]
70. spata13 ENSDARG00000062837 334.34 2506.24 spermatogenesis associated 13 [Source:ZFIN;Acc:ZDB-GENE-091116-25]
71. ywhabl ENSDARG00000040287 334.34 2506.24 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide like [Source:ZFIN;Acc:ZDB-GENE-030131-448]
72. zgc:66286 zgc:66286 334.34 2506.24
73. AC024175.17 AC024175.17 222.89 1670.80
74. CABZ01080098.1 ENSDARG00000110680 222.89 1670.80
75. ENSDARG00000090222 ENSDARG00000090222 222.89 1670.80
76. SLC22A23 ENSDARG00000078856 222.89 1670.80 solute carrier family 22, member 23 [Source:ZFIN;Acc:ZDB-GENE-030131-3564]
77. acta1a ENSDARG00000036371 222.89 1670.80 actin, alpha 1a, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-050417-267]
78. acta1b ENSDARG00000055618 222.89 1670.80 actin, alpha 1b, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-030131-55]
79. agpat4 ENSDARG00000069044 222.89 1670.80 1-acylglycerol-3-phosphate O-acyltransferase 4 (lysophosphatidic acid acyltransferase, delta) [Source:ZFIN;Acc:ZDB-GENE-040426-1924]
80. ahcy ENSDARG00000005191 222.89 1670.80 adenosylhomocysteinase [Source:ZFIN;Acc:ZDB-GENE-031219-6]
81. aldoab ENSDARG00000034470 222.89 1670.80 aldolase a, fructose-bisphosphate, b [Source:ZFIN;Acc:ZDB-GENE-040426-2299]
82. atf4b1 atf4b1 222.89 1670.80
83. btf3 ENSDARG00000035400, ENSDARG00000116462 222.89 1670.80 basic transcription factor 3 [Source:ZFIN;Acc:ZDB-GENE-030131-8731]
84. btg1 ENSDARG00000027249 222.89 1670.80 B-cell translocation gene 1, anti-proliferative [Source:ZFIN;Acc:ZDB-GENE-010726-1]
85. chmp2bb ENSDARG00000002190 222.89 1670.80 charged multivesicular body protein 2Bb [Source:ZFIN;Acc:ZDB-GENE-040426-2539]
86. cirbp cirbp 222.89 1670.80
87. cnksr1 ENSDARG00000032932, ENSDARG00000109531 222.89 1670.80 connector enhancer of kinase suppressor of Ras 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1802]
88. col1a1b ENSDARG00000035809 222.89 1670.80 collagen, type I, alpha 1b [Source:ZFIN;Acc:ZDB-GENE-030131-4400]
89. col4a6 ENSDARG00000052061 222.89 1670.80 collagen, type IV, alpha 6 [Source:ZFIN;Acc:ZDB-GENE-101001-2]
90. col9a1 col9a1 222.89 1670.80
91. cox4i1 ENSDARG00000032970 222.89 1670.80 cytochrome c oxidase subunit 4I1 [Source:ZFIN;Acc:ZDB-GENE-030131-5175]
92. cox7a3 222.89 1670.80 cytochrome c oxidase subunit VIIa polypeptide 3
93. csad ENSDARG00000026348 222.89 1670.80 cysteine sulfinic acid decarboxylase [Source:ZFIN;Acc:ZDB-GENE-041114-36]
94. cycsb ENSDARG00000044562 222.89 1670.80 cytochrome c, somatic b [Source:ZFIN;Acc:ZDB-GENE-040625-38]
95. dcaf7 ENSDARG00000054355 222.89 1670.80 ddb1 and cul4 associated factor 7 [Source:ZFIN;Acc:ZDB-GENE-030131-9511]
96. dynll1 ENSDARG00000058454 222.89 1670.80 dynein, light chain, LC8-type 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1961]
97. eif5a ENSDARG00000017235 222.89 1670.80 eukaryotic translation initiation factor 5A [Source:ZFIN;Acc:ZDB-GENE-040426-2229]
98. eif5a2 ENSDARG00000056186 222.89 1670.80 eukaryotic translation initiation factor 5A2 [Source:ZFIN;Acc:ZDB-GENE-040426-2405]
99. ewsr1a ENSDARG00000020258, ENSDARG00000113252 222.89 1670.80 EWS RNA-binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-2317]
100. fabp2 ENSDARG00000006427, ENSDARG00000110230 222.89 1670.80 fatty acid binding protein 2, intestinal [Source:ZFIN;Acc:ZDB-GENE-991019-5]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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