Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Zebrafish_28hpf_trunk1, section s28.

Sample reads: 133,401. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. AC024175.4 AC024175.4 21954.94 164578.38
2. krt4 ENSDARG00000017624, ENSDARG00000115790 4988.40 37393.99 keratin 4 [Source:ZFIN;Acc:ZDB-GENE-000607-83]
3. zgc:161979_1 zgc:161979_1 3674.09 27541.67
4. zgc:161979 zgc:161979 3524.74 26422.12
5. apoa1b ENSDARG00000101324 3046.81 22839.46 apolipoprotein A-Ib [Source:ZFIN;Acc:ZDB-GENE-050302-172]
6. apoa2 ENSDARG00000015866 2568.88 19256.81 apolipoprotein A-II [Source:ZFIN;Acc:ZDB-GENE-030131-1046]
7. apoc1l apoc1l 2539.01 19032.90
8. apoeb ENSDARG00000040295 2509.14 18808.99 apolipoprotein Eb [Source:ZFIN;Acc:ZDB-GENE-980526-368]
9. tmsb4x ENSDARG00000077777 2210.43 16569.80 thymosin beta 4 X-linked [Source:ZFIN;Acc:ZDB-GENE-030131-8304]
10. apobb apobb 1463.66 10971.87
11. actb1 ENSDARG00000037746, ENSDARG00000113649 1075.34 8060.95 actin, beta 1 [Source:ZFIN;Acc:ZDB-GENE-000329-1]
12. fabp2 ENSDARG00000006427, ENSDARG00000110230 1045.47 7837.04 fatty acid binding protein 2, intestinal [Source:ZFIN;Acc:ZDB-GENE-991019-5]
13. actb2 ENSDARG00000037870 1015.60 7613.13 actin, beta 2 [Source:ZFIN;Acc:ZDB-GENE-000329-3]
14. apoa1a ENSDARG00000012076, ENSDARG00000110395 985.73 7389.22 apolipoprotein A-Ia [Source:ZFIN;Acc:ZDB-GENE-990415-14]
15. rbp4 ENSDARG00000101199 866.25 6493.57 retinol binding protein 4, plasma [Source:ZFIN;Acc:ZDB-GENE-000210-19]
16. eef1a1l1 ENSDARG00000020850 806.51 6045.75 eukaryotic translation elongation factor 1 alpha 1, like 1 [Source:ZFIN;Acc:ZDB-GENE-990415-52]
17. mt-nd2 ENSDARG00000063899 776.64 5821.84 NADH dehydrogenase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-8]
18. zgc:153129 zgc:153129 746.77 5597.93
19. mt-co3 ENSDARG00000063912 657.15 4926.12 cytochrome c oxidase III, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-16]
20. ctsla ENSDARG00000007836 597.41 4478.30 cathepsin La [Source:ZFIN;Acc:ZDB-GENE-030131-106]
21. fetub ENSDARG00000053973 567.54 4254.39 fetuin B [Source:ZFIN;Acc:ZDB-GENE-050208-4]
22. mt-co2 ENSDARG00000063908 537.67 4030.48 cytochrome c oxidase II, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-15]
23. tpma ENSDARG00000033683 507.80 3806.56 alpha-tropomyosin [Source:ZFIN;Acc:ZDB-GENE-990415-269]
24. bhmt ENSDARG00000013430 477.93 3582.65 betaine-homocysteine methyltransferase [Source:ZFIN;Acc:ZDB-GENE-030131-947]
25. gamt ENSDARG00000070844, ENSDARG00000109945 477.93 3582.65 guanidinoacetate N-methyltransferase [Source:ZFIN;Acc:ZDB-GENE-051030-97]
26. mt2 ENSDARG00000041623, ENSDARG00000113583 448.06 3358.74 metallothionein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4174]
27. serp1 ENSDARG00000099439 448.06 3358.74 stress-associated endoplasmic reticulum protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8741]
28. apoa4 apoa4 418.19 3134.83
29. cfl1l ENSDARG00000012972 418.19 3134.83 cofilin 1 (non-muscle), like [Source:ZFIN;Acc:ZDB-GENE-040426-2770]
30. mt-cyb ENSDARG00000063924 418.19 3134.83 cytochrome b, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-17]
31. mt-nd4 ENSDARG00000063917 418.19 3134.83 NADH dehydrogenase 4, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-10]
32. cyt1l ENSDARG00000036832 388.32 2910.92 type I cytokeratin, enveloping layer, like [Source:ZFIN;Acc:ZDB-GENE-061026-4]
33. rpl23 ENSDARG00000053457 388.32 2910.92 ribosomal protein L23 [Source:ZFIN;Acc:ZDB-GENE-030131-8756]
34. apoc2 ENSDARG00000092155 358.45 2687.01 apolipoprotein C-II [Source:ZFIN;Acc:ZDB-GENE-030131-2168]
35. fgb ENSDARG00000008969 358.45 2687.01 fibrinogen beta chain [Source:ZFIN;Acc:ZDB-GENE-030131-9261]
36. krt8 ENSDARG00000058358, ENSDARG00000109279 358.45 2687.01 keratin 8 [Source:ZFIN;Acc:ZDB-GENE-030411-5]
37. mt-atp6 ENSDARG00000063911 358.45 2687.01 ATP synthase 6, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-18]
38. icn ENSDARG00000009978 298.71 2239.19 ictacalcin [Source:ZFIN;Acc:ZDB-GENE-030131-8599]
39. pcna ENSDARG00000054155 298.71 2239.19 proliferating cell nuclear antigen [Source:ZFIN;Acc:ZDB-GENE-000210-8]
40. pfn1 ENSDARG00000088091 298.71 2239.19 profilin 1 [Source:ZFIN;Acc:ZDB-GENE-031002-33]
41. ppiaa ENSDARG00000009212 298.71 2239.19 peptidylprolyl isomerase Aa (cyclophilin A) [Source:ZFIN;Acc:ZDB-GENE-030131-8556]
42. prdx5 ENSDARG00000055064 298.71 2239.19 peroxiredoxin 5 [Source:ZFIN;Acc:ZDB-GENE-050522-159]
43. rps15 ENSDARG00000070849, ENSDARG00000110979 298.71 2239.19 ribosomal protein S15 [Source:ZFIN;Acc:ZDB-GENE-030131-9092]
44. si:dkey-151g10.6 si:dkey-151g10.6 298.71 2239.19
45. slc43a2b ENSDARG00000061120, ENSDARG00000117188 298.71 2239.19 solute carrier family 43 (amino acid system L transporter), member 2b [Source:ZFIN;Acc:ZDB-GENE-041212-6]
46. cirbp cirbp 268.84 2015.28
47. gatm ENSDARG00000036239 268.84 2015.28 glycine amidinotransferase (L-arginine:glycine amidinotransferase) [Source:ZFIN;Acc:ZDB-GENE-021015-1]
48. hmgn2 ENSDARG00000099572 268.84 2015.28 high mobility group nucleosomal binding domain 2 [Source:ZFIN;Acc:ZDB-GENE-051030-81]
49. npc2 ENSDARG00000090912 268.84 2015.28 Niemann-Pick disease, type C2 [Source:ZFIN;Acc:ZDB-GENE-021206-13]
50. psap ENSDARG00000013968 268.84 2015.28 prosaposin [Source:ZFIN;Acc:ZDB-GENE-020108-1]
51. rpl21 ENSDARG00000010516, ENSDARG00000110263 268.84 2015.28 ribosomal protein L21 [Source:ZFIN;Acc:ZDB-GENE-030131-8512]
52. tfa ENSDARG00000016771 268.84 2015.28 transferrin-a [Source:ZFIN;Acc:ZDB-GENE-980526-35]
53. zgc:193505 ENSDARG00000093584, ENSDARG00000109499 268.84 2015.28 zgc:193505 [Source:ZFIN;Acc:ZDB-GENE-030131-7103]
54. CU914813.1 CU914813.1 238.97 1791.36
55. actc1b ENSDARG00000099197 238.97 1791.36 actin, alpha, cardiac muscle 1b [Source:ZFIN;Acc:ZDB-GENE-000322-1]
56. atp6v1g1 ENSDARG00000022315, ENSDARG00000110951 238.97 1791.36 ATPase H+ transporting V1 subunit G1 [Source:ZFIN;Acc:ZDB-GENE-030131-6965]
57. cd9b ENSDARG00000016691 238.97 1791.36 CD9 molecule b [Source:ZFIN;Acc:ZDB-GENE-040426-2768]
58. ddt ENSDARG00000044751, ENSDARG00000109625 238.97 1791.36 D-dopachrome tautomerase [Source:ZFIN;Acc:ZDB-GENE-040625-160]
59. prps1a ENSDARG00000015524 238.97 1791.36 phosphoribosyl pyrophosphate synthetase 1A [Source:ZFIN;Acc:ZDB-GENE-011212-5]
60. ptmab ENSDARG00000101766 238.97 1791.36 prothymosin alpha b [Source:ZFIN;Acc:ZDB-GENE-030131-8681]
61. rpl15 ENSDARG00000009285 238.97 1791.36 ribosomal protein L15 [Source:ZFIN;Acc:ZDB-GENE-040801-183]
62. rpl26 ENSDARG00000102317 238.97 1791.36 ribosomal protein L26 [Source:ZFIN;Acc:ZDB-GENE-040426-2117]
63. rps14 ENSDARG00000036629 238.97 1791.36 ribosomal protein S14 [Source:ZFIN;Acc:ZDB-GENE-030131-8631]
64. ldhba ENSDARG00000019644 209.09 1567.38 lactate dehydrogenase Ba [Source:ZFIN;Acc:ZDB-GENE-991026-6]
65. myh9a ENSDARG00000063295 209.09 1567.38 myosin, heavy chain 9a, non-muscle [Source:ZFIN;Acc:ZDB-GENE-030131-5870]
66. mylpfa ENSDARG00000053254, ENSDARG00000112448, ENSDARG00000113256 209.09 1567.38 myosin light chain, phosphorylatable, fast skeletal muscle a [Source:ZFIN;Acc:ZDB-GENE-990712-15]
67. rpl10a ENSDARG00000042905, ENSDARG00000115649 209.09 1567.38 ribosomal protein L10a [Source:ZFIN;Acc:ZDB-GENE-030131-2025]
68. rpl11 ENSDARG00000043509 209.09 1567.38 ribosomal protein L11 [Source:ZFIN;Acc:ZDB-GENE-040625-147]
69. rpl30 ENSDARG00000035871, ENSDARG00000109253 209.09 1567.38 ribosomal protein L30 [Source:ZFIN;Acc:ZDB-GENE-030131-8657]
70. rpl36a ENSDARG00000058105, ENSDARG00000112656 209.09 1567.38 ribosomal protein L36A [Source:ZFIN;Acc:ZDB-GENE-020423-1]
71. rps2 ENSDARG00000077291 209.09 1567.38 ribosomal protein S2 [Source:ZFIN;Acc:ZDB-GENE-040426-2454]
72. zgc:153867 209.09 1567.38 zgc:153867, transcript variant X2
73. APOA4 APOA4 179.22 1343.47
74. COX5B_1 ENSDARG00000015978 179.22 1343.47 cytochrome c oxidase subunit 5B [Source:HGNC Symbol;Acc:HGNC:2269]
75. FP067396.1 FP067396.1 179.22 1343.47
76. aldob ENSDARG00000053684 179.22 1343.47 aldolase b, fructose-bisphosphate [Source:ZFIN;Acc:ZDB-GENE-030131-383]
77. atp5g3b 179.22 1343.47 ATP synthase, H+ transporting, mitochondrial F0 complex, subunit c3 (subunit 9) b, transcript variant X1
78. atp6v0ca ENSDARG00000057853 179.22 1343.47 ATPase H+ transporting V0 subunit ca [Source:ZFIN;Acc:ZDB-GENE-020419-23]
79. ckmb ENSDARG00000040565 179.22 1343.47 creatine kinase, muscle b [Source:ZFIN;Acc:ZDB-GENE-040426-2128]
80. ckmt1 ENSDARG00000016598, ENSDARG00000113143 179.22 1343.47 creatine kinase, mitochondrial 1 [Source:ZFIN;Acc:ZDB-GENE-030131-611]
81. cox7a3 179.22 1343.47 cytochrome c oxidase subunit VIIa polypeptide 3
82. ctsll ENSDARG00000011701, ENSDARG00000112885 179.22 1343.47 cathepsin L, like [Source:ZFIN;Acc:ZDB-GENE-041010-76]
83. hdlbp hdlbp 179.22 1343.47
84. hspa8 ENSDARG00000068992, ENSDARG00000114726 179.22 1343.47 heat shock protein 8 [Source:ZFIN;Acc:ZDB-GENE-990415-92]
85. id1 ENSDARG00000040764 179.22 1343.47 inhibitor of DNA binding 1 [Source:ZFIN;Acc:ZDB-GENE-990415-96]
86. mat1a ENSDARG00000039605, ENSDARG00000115975 179.22 1343.47 methionine adenosyltransferase I, alpha [Source:ZFIN;Acc:ZDB-GENE-030131-6127]
87. mt-nd1 ENSDARG00000063895 179.22 1343.47 NADH dehydrogenase 1, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-7]
88. myl12.1 ENSDARG00000099766 179.22 1343.47 myosin, light chain 12, genome duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4918]
89. ptpn21 ENSDARG00000062248 179.22 1343.47 protein tyrosine phosphatase, non-receptor type 21 [Source:ZFIN;Acc:ZDB-GENE-080102-4]
90. rpl19 ENSDARG00000013307 179.22 1343.47 ribosomal protein L19 [Source:ZFIN;Acc:ZDB-GENE-040426-2290]
91. rpl22 ENSDARG00000070437 179.22 1343.47 ribosomal protein L22 [Source:ZFIN;Acc:ZDB-GENE-051113-276]
92. rpl35 ENSDARG00000018334 179.22 1343.47 ribosomal protein L35 [Source:ZFIN;Acc:ZDB-GENE-020419-2]
93. rps3a ENSDARG00000035692, ENSDARG00000114628, ENSDARG00000115378 179.22 1343.47 ribosomal protein S3A [Source:ZFIN;Acc:ZDB-GENE-030131-9184]
94. rps4x ENSDARG00000014690 179.22 1343.47 ribosomal protein S4 X-linked [Source:ZFIN;Acc:ZDB-GENE-040927-19]
95. rtn1a ENSDARG00000006497 179.22 1343.47 reticulon 1a [Source:ZFIN;Acc:ZDB-GENE-030131-2426]
96. sepp1a 179.22 1343.47 selenoprotein P, plasma, 1a
97. slc25a3b ENSDARG00000025566 179.22 1343.47 solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 3b [Source:ZFIN;Acc:ZDB-GENE-040426-1916]
98. APOB APOB 149.35 1119.56
99. CFI 149.35 1119.56 complement factor I
100. FP102272.1 FP102272.1 149.35 1119.56
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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